##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088681_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1500950 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.601107298710815 31.0 31.0 34.0 30.0 34.0 2 31.782876844665047 31.0 31.0 34.0 30.0 34.0 3 31.848898364369234 31.0 31.0 34.0 30.0 34.0 4 35.54507278723475 37.0 35.0 37.0 33.0 37.0 5 35.462074019787465 37.0 35.0 37.0 33.0 37.0 6 35.53297444951531 37.0 35.0 37.0 33.0 37.0 7 35.40039708184816 37.0 35.0 37.0 33.0 37.0 8 35.44201205902928 37.0 35.0 37.0 33.0 37.0 9 37.02030980379093 39.0 37.0 39.0 33.0 39.0 10 36.849259469002966 39.0 37.0 39.0 32.0 39.0 11 36.946179419700854 39.0 37.0 39.0 33.0 39.0 12 36.820389753156334 39.0 37.0 39.0 32.0 39.0 13 36.858802758253105 39.0 37.0 39.0 32.0 39.0 14 37.82191545354609 40.0 37.0 41.0 32.0 41.0 15 37.83185982211266 40.0 37.0 41.0 32.0 41.0 16 37.71459142543056 39.0 37.0 41.0 32.0 41.0 17 37.7971084979513 40.0 37.0 41.0 32.0 41.0 18 37.78524800959392 40.0 37.0 41.0 32.0 41.0 19 37.850530663912856 40.0 37.0 41.0 32.0 41.0 20 37.737127819047934 40.0 37.0 41.0 32.0 41.0 21 37.66975115760019 40.0 37.0 41.0 32.0 41.0 22 37.518829408041576 39.0 36.0 41.0 32.0 41.0 23 37.341557680135914 39.0 36.0 41.0 31.0 41.0 24 37.19273993137679 39.0 36.0 41.0 31.0 41.0 25 37.35581198574236 39.0 36.0 41.0 31.0 41.0 26 37.21573336886638 39.0 36.0 41.0 31.0 41.0 27 37.07339751490723 39.0 36.0 41.0 31.0 41.0 28 36.89853359538959 39.0 35.0 41.0 31.0 41.0 29 36.77919251140944 39.0 35.0 41.0 30.0 41.0 30 36.56788833738632 39.0 35.0 40.0 30.0 41.0 31 36.3995096438922 38.0 35.0 40.0 30.0 41.0 32 36.169354741996735 38.0 35.0 40.0 30.0 41.0 33 35.994240314467504 38.0 35.0 40.0 30.0 41.0 34 35.78549052266898 38.0 35.0 40.0 29.0 41.0 35 35.624182684299946 38.0 35.0 40.0 27.0 41.0 36 35.398023918185146 38.0 34.0 40.0 26.0 41.0 37 35.29086578500283 38.0 34.0 40.0 25.0 41.0 38 35.06916619474333 38.0 34.0 40.0 25.0 41.0 39 34.92270761850828 38.0 34.0 40.0 24.0 41.0 40 34.718001932109665 38.0 33.0 40.0 23.0 41.0 41 34.53692328192145 38.0 33.0 40.0 22.0 41.0 42 34.24223325227356 38.0 33.0 40.0 21.0 41.0 43 33.86538192478097 38.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 6.0 16 20.0 17 50.0 18 84.0 19 233.0 20 534.0 21 1103.0 22 2059.0 23 3642.0 24 5833.0 25 9129.0 26 12987.0 27 18370.0 28 25045.0 29 32930.0 30 41462.0 31 50828.0 32 62594.0 33 77686.0 34 94710.0 35 116354.0 36 150806.0 37 213711.0 38 268971.0 39 311801.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.83733635364269 21.498517605516508 14.20027316033179 21.46387288050901 2 18.412671974416202 24.648056231053665 35.03674339584929 21.902528398680836 3 20.000266497884674 26.336253705986206 32.85412572037709 20.809354075752022 4 13.307505246677104 17.43329224824278 37.21123288583897 32.047969619241144 5 12.143309237482928 39.86874979179853 34.61501049335421 13.372930477364337 6 30.281221892801224 38.06809020953396 14.30174222992105 17.348945667743763 7 24.894633398847397 34.06542523068723 22.66864319264466 18.371298177820712 8 27.399247143475797 34.714347579866086 19.605716379626237 18.28068889703188 9 25.01855491522036 14.37749425363936 22.6563842899497 37.94756654119058 10 16.78303740964056 28.329991005696392 33.30823811585996 21.57873346880309 11 31.786401945434555 23.557946633798593 23.958559578933343 20.697091841833508 12 20.23771611312835 28.40607615177054 31.73563409840434 19.620573636696758 13 30.81475065791665 22.097005230020986 27.500183217295714 19.58806089476665 14 20.26723075385589 23.766347979612913 29.69832439455012 26.26809687198108 15 22.88264099403711 29.828641860155237 26.834005130084282 20.454712015723373 16 20.12145641093974 29.094906559179183 28.773243612378828 22.01039341750225 17 20.288017588860388 28.131583330557312 29.039808121523038 22.540590959059262 18 21.453546087477932 25.958892701289184 31.29771144941537 21.289849761817514 19 22.089476664778974 25.484593091042342 32.87797728105533 19.547952963123354 20 22.283886871647958 25.45761018021919 32.76191745228022 19.496585495852628 21 21.250474699357074 26.003930843798926 33.23555081781539 19.510043639028616 22 20.04430527332689 26.542656317665482 33.03154668709817 20.381491721909455 23 20.41227222758919 26.91815183716979 33.429494653386186 19.240081281854827 24 20.282487757753422 26.891435424231318 32.17302375162397 20.653053066391287 25 20.272960458376364 27.25833638695493 32.73440154568773 19.734301608980978 26 20.163563076718077 27.5037809387388 32.64186015523502 19.690795829308104 27 19.61857490256171 27.737499583597053 32.47389986341984 20.1700256504214 28 19.654818614877247 27.618375029148208 32.45744361904128 20.269362736933275 29 19.774409540624273 27.575868616542852 32.23331889803125 20.416402944801625 30 19.7798061227889 28.05942902828209 32.96205736366968 19.198707485259337 31 20.147106832339517 27.682134648056234 32.7888337386322 19.381924780972053 32 19.922915486858322 27.659815450214865 32.30820480362437 20.109064259302443 33 19.734901229221492 27.629168193477465 32.45624437856024 20.179686198740796 34 19.078450314800627 27.917785402578367 33.02701622305873 19.976748059562276 35 18.968986308671177 29.238415670075618 32.15010493354209 19.642493087711117 36 20.014457510243513 27.833838568906362 32.09347413304907 20.05822978780106 37 19.49691861820847 28.1211232885839 32.07568539924714 20.30627269396049 38 19.422365834971185 27.35261001365802 32.672107665145404 20.55291648622539 39 19.317099170525335 27.051067657150472 33.17878676838003 20.45304640394417 40 18.57543555748026 27.45894266964256 32.86725074119724 21.098371031679935 41 19.371464738998633 26.783637029881074 32.696758719477664 21.148139511642626 42 18.273493454145708 28.04330590625937 32.45977547553217 21.22342516406276 43 18.425930244178687 27.87168126852993 31.8704820280489 21.831906459242482 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 466.0 1 692.5 2 919.0 3 1810.5 4 2702.0 5 2702.0 6 4004.0 7 5306.0 8 5727.0 9 6148.0 10 8741.5 11 11335.0 12 11335.0 13 19134.0 14 26933.0 15 38780.0 16 50627.0 17 48092.5 18 45558.0 19 45558.0 20 48889.0 21 52220.0 22 42321.0 23 32422.0 24 34422.5 25 36423.0 26 36423.0 27 39021.0 28 41619.0 29 44341.5 30 47064.0 31 50694.0 32 54324.0 33 54324.0 34 57911.0 35 61498.0 36 64973.0 37 68448.0 38 70638.5 39 72829.0 40 72829.0 41 74613.0 42 76397.0 43 80030.5 44 83664.0 45 88365.0 46 93066.0 47 93066.0 48 110004.5 49 126943.0 50 120596.0 51 114249.0 52 106336.0 53 98423.0 54 98423.0 55 89035.5 56 79648.0 57 69224.0 58 58800.0 59 51791.5 60 44783.0 61 44783.0 62 39185.5 63 33588.0 64 29039.0 65 24490.0 66 20919.5 67 17349.0 68 17349.0 69 14762.5 70 12176.0 71 10330.0 72 8484.0 73 6863.5 74 5243.0 75 5243.0 76 4254.0 77 3265.0 78 2491.0 79 1717.0 80 1329.5 81 942.0 82 942.0 83 692.0 84 442.0 85 331.5 86 221.0 87 161.5 88 102.0 89 102.0 90 91.5 91 81.0 92 49.5 93 18.0 94 16.0 95 14.0 96 14.0 97 7.5 98 1.0 99 2.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1500950.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.26351378628806 #Duplication Level Percentage of deduplicated Percentage of total 1 84.58389832500356 52.664907194568464 2 9.376486266755467 11.676259638741396 3 2.5935964703961454 4.844592887717354 4 1.0977214205633867 2.7339197121100858 5 0.5808667819722183 1.8083403443662 6 0.3635775136197481 1.3582568118988514 7 0.24998746696482513 1.0895568667034534 8 0.18198295544310025 0.9064718604080735 9 0.13483036926597775 0.7555511300042265 >10 0.7515290951426813 8.562309265450356 >50 0.05273619538617925 2.2529057673776642 >100 0.02807276404898532 3.265682212711373 >500 0.002464332615225369 1.095747511953144 >1k 0.0018214632373404905 2.0314525105927057 >5k 1.071448963141465E-4 0.6274280273923483 >10k+ 3.2143468894243945E-4 4.3266182580043315 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23500 1.5656750724541126 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 22981 1.5310969719177854 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 18374 1.2241580332456112 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9405 0.6266031513374862 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2851 0.18994636730070955 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2593 0.17275725373929846 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2527 0.1683600386421933 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2313 0.15410240181218562 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2219 0.14783970152236917 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2097 0.13971151603984144 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2032 0.1353809254139045 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1956 0.13031746560511676 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1672 0.11139611579333089 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1579 0.1052000399746827 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 6.66244711682601E-5 0.0 11 0.0 0.0 0.0 3.9974682700956064E-4 0.0 12 0.0 0.0 0.0 5.996202405143409E-4 0.0 13 0.0 0.0 0.0 6.662447116826011E-4 0.0 14 0.0 0.0 0.0 9.993670675239015E-4 0.0 15 0.0 0.0 0.0 0.0011992404810286818 0.0 16 0.0 0.0 0.0 0.001998734135047803 0.0 17 0.0 0.0 0.0 0.0035977214430860456 0.0 18 0.0 0.0 0.0 0.004197341683600387 0.0 19 0.0 0.0 0.0 0.00632932476098471 0.0 20 0.0 0.0 0.0 0.010793164329258137 0.0 21 0.0 0.0 0.0 0.01972084346580499 0.0 22 0.0 0.0 0.0 0.031047003564409207 0.0 23 0.0 0.0 0.0 0.03904194010460042 0.0 24 0.0 0.0 0.0 0.05103434491488724 0.0 25 6.66244711682601E-5 0.0 0.0 0.06009527299377061 0.0 26 6.66244711682601E-5 0.0 0.0 0.07095506179419701 0.0 27 6.66244711682601E-5 0.0 0.0 0.1345814317598854 0.0 28 6.66244711682601E-5 0.0 0.0 0.2529731170258836 0.0 29 6.66244711682601E-5 0.0 0.0 0.4081415103767614 0.0 30 6.66244711682601E-5 0.0 0.0 0.6022852193610713 0.0 31 6.66244711682601E-5 0.0 0.0 0.859122555714714 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5190 0.0 30.29865 1 AGTCGTG 230 0.0 19.304348 20 GTATCAA 8420 0.0 18.653801 2 TACGCGC 50 0.007035862 18.499998 17 GAGTCGT 250 0.0 17.76 19 TGAGTCG 255 0.0 17.411764 18 TTGGACC 440 0.0 16.397728 4 TATACCG 105 9.34683E-6 15.857142 5 GTATTGG 375 0.0 15.786668 1 GGTGCTC 350 0.0 15.328571 8 CTAGCAC 145 5.3483745E-8 15.310345 3 TATACGT 85 5.3655106E-4 15.235293 4 GTGCTCG 300 0.0 14.8 9 ATACGTC 75 0.0041051838 14.8 5 TATACTG 300 0.0 14.8 5 ACGGTGT 100 1.093718E-4 14.799999 29 GGACCCT 520 0.0 14.586538 6 ATTGGAC 395 0.0 14.518987 3 AGACGCG 90 8.276096E-4 14.388887 14 ACCGTCC 90 8.276096E-4 14.388887 8 >>END_MODULE