##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088677_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 811488 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.62893721164084 31.0 31.0 34.0 30.0 34.0 2 31.84053738317757 31.0 31.0 34.0 30.0 34.0 3 31.92132847312591 31.0 31.0 34.0 30.0 34.0 4 35.6311146930084 37.0 35.0 37.0 33.0 37.0 5 35.50409494656729 37.0 35.0 37.0 33.0 37.0 6 35.549465919397456 37.0 35.0 37.0 33.0 37.0 7 35.419001882960686 37.0 35.0 37.0 33.0 37.0 8 35.44717481959068 37.0 35.0 37.0 33.0 37.0 9 37.05050105485232 39.0 37.0 39.0 33.0 39.0 10 36.866845843684686 39.0 37.0 39.0 33.0 39.0 11 36.95993409637604 39.0 37.0 39.0 33.0 39.0 12 36.814389122205135 39.0 37.0 39.0 32.0 39.0 13 36.8523601088371 39.0 37.0 39.0 32.0 39.0 14 37.85666208249537 40.0 37.0 41.0 32.0 41.0 15 37.867217999526794 40.0 37.0 41.0 33.0 41.0 16 37.76081716550337 40.0 37.0 41.0 32.0 41.0 17 37.78269549272448 40.0 37.0 41.0 32.0 41.0 18 37.743870519342245 40.0 37.0 41.0 32.0 41.0 19 37.78304300248433 40.0 37.0 41.0 32.0 41.0 20 37.666704868094165 40.0 37.0 41.0 32.0 41.0 21 37.601915247052325 39.0 37.0 41.0 32.0 41.0 22 37.46498038171852 39.0 36.0 41.0 32.0 41.0 23 37.29642705745495 39.0 36.0 41.0 31.0 41.0 24 37.155882773374344 39.0 36.0 41.0 31.0 41.0 25 37.33967846721085 39.0 36.0 41.0 31.0 41.0 26 37.222639151780434 39.0 36.0 41.0 31.0 41.0 27 37.12213982215387 39.0 36.0 41.0 31.0 41.0 28 36.95745839741315 39.0 36.0 41.0 31.0 41.0 29 36.859036732521 39.0 35.0 41.0 30.0 41.0 30 36.67175854726133 39.0 35.0 40.0 30.0 41.0 31 36.53166035726961 39.0 35.0 40.0 30.0 41.0 32 36.36559259040183 38.0 35.0 40.0 30.0 41.0 33 36.23162388106787 38.0 35.0 40.0 30.0 41.0 34 36.06591225008873 38.0 35.0 40.0 29.0 41.0 35 35.93598426594109 38.0 35.0 40.0 29.0 41.0 36 35.75553551007532 38.0 35.0 40.0 27.0 41.0 37 35.69624812689775 38.0 35.0 40.0 27.0 41.0 38 35.528721311960254 38.0 34.0 40.0 26.0 41.0 39 35.439233851886904 38.0 34.0 40.0 26.0 41.0 40 35.286901346661935 38.0 34.0 40.0 25.0 41.0 41 35.160664113332544 38.0 34.0 40.0 24.0 41.0 42 34.93583638944753 38.0 34.0 40.0 24.0 41.0 43 34.58131481919634 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 5.0 16 15.0 17 18.0 18 51.0 19 147.0 20 275.0 21 518.0 22 1036.0 23 1767.0 24 2860.0 25 4494.0 26 6492.0 27 9004.0 28 12362.0 29 16505.0 30 21285.0 31 26366.0 32 32514.0 33 40617.0 34 50083.0 35 61959.0 36 80065.0 37 111330.0 38 152720.0 39 178998.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.140472810442056 21.329089277968375 13.854425450530384 23.67601246105919 2 18.97551165266769 23.11161717733349 34.86299242872353 23.049878741275286 3 19.5456987657242 24.35131511494933 32.56154126740014 23.54144485192634 4 13.965825742339998 16.583116447809456 36.19043041918057 33.26062739066998 5 12.757305098781499 38.399582002444895 35.11167139871446 13.73144150005915 6 32.45198943175993 37.37689281911747 14.040010449938878 16.13110729918372 7 26.14431759927442 32.93751725225758 21.78048227453764 19.13768287393036 8 26.675933593595964 34.694536456484876 19.343847352024923 19.285682597894237 9 24.78607200599393 14.613155092866437 21.707036949406522 38.89373595173311 10 16.284036239599352 27.903678181316298 34.03229622619188 21.779989352892464 11 33.06173350684175 22.72578275957254 23.383586695058952 20.828897038526755 12 20.699874797902126 27.335955676485668 31.06638668717221 20.89778283844 13 31.033114476122876 21.386514649631295 25.996687566544423 21.583683307701406 14 20.524025000985844 23.18358373752908 27.792031428684094 28.500359832800974 15 22.890665049883673 29.889782720138808 25.101048937260934 22.11850329271659 16 21.87660199534682 28.475590520130922 26.576486651681847 23.07132083284041 17 21.526134705627193 27.487529082377065 27.228129066603575 23.75820714539217 18 22.57963149177807 26.174016128396232 29.220395125990773 22.025957253834928 19 22.50199633266296 25.644495051066684 30.42337040104105 21.43013821522931 20 23.366211207066527 25.313621396742775 30.02484325091683 21.295324145273867 21 22.391581884143697 26.01948519263378 30.41819472376671 21.170738199455815 22 21.425208998777553 26.384000749240897 30.081406009700697 22.109384242280846 23 22.19268800031547 26.36292834890966 30.49546019164794 20.948923459126938 24 22.041607516069245 26.569832209471983 29.03826057809851 22.350299696360267 25 22.173094364919752 26.64389368665957 29.788487322055285 21.394524626365392 26 21.65540340707441 27.265837572459482 29.65601462991443 21.422744390551678 27 20.876463977286168 27.237494577861902 29.549790015379156 22.33625142947277 28 21.344862770613986 26.959117078749163 29.568028116250638 22.127992034386214 29 21.496066485271502 26.85930044560117 29.204621633345162 22.440011435782168 30 21.697178516503016 27.075076895776647 30.322937615836587 20.90480697188375 31 22.239885247841006 26.922024724949722 30.01473835719074 20.823351670018532 32 21.69372806498679 26.748269845025437 29.42384853503687 22.134153554950906 33 21.395510469655743 26.740876020347805 29.977399542568712 21.886213967427736 34 20.9516345281754 26.810747663551403 30.544998816988052 21.692618991285144 35 20.747564967072833 28.229745849599748 29.62508379667968 21.39760538664774 36 22.188621396742775 26.663980243700465 29.424218226270753 21.723180133286014 37 21.422251468906502 27.08259395086557 29.664147837059822 21.831006743168103 38 21.281768800031546 25.993360345439488 30.739826097243583 21.985044757285383 39 20.843807918293308 25.850536298749947 31.385306991600615 21.920348791356126 40 20.119582791119523 25.999768326826768 31.23348712488663 22.64716175716708 41 20.98478350881344 25.29895697779881 31.24642631807248 22.46983319531527 42 19.92561812374305 26.852399542568712 30.67944319570961 22.542539137978626 43 20.072262313182694 26.658558105603536 30.265881935407545 23.003297645806224 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 301.0 1 261.0 2 221.0 3 410.5 4 600.0 5 600.0 6 904.5 7 1209.0 8 1311.5 9 1414.0 10 2249.0 11 3084.0 12 3084.0 13 5677.0 14 8270.0 15 12851.5 16 17433.0 17 16362.0 18 15291.0 19 15291.0 20 16735.5 21 18180.0 22 15212.0 23 12244.0 24 13989.0 25 15734.0 26 15734.0 27 17381.5 28 19029.0 29 20826.5 30 22624.0 31 25214.5 32 27805.0 33 27805.0 34 30597.0 35 33389.0 36 36155.5 37 38922.0 38 40766.0 39 42610.0 40 42610.0 41 43857.5 42 45105.0 43 47155.5 44 49206.0 45 51665.5 46 54125.0 47 54125.0 48 65675.5 49 77226.0 50 72402.5 51 67579.0 52 61954.0 53 56329.0 54 56329.0 55 51578.0 56 46827.0 57 41438.0 58 36049.0 59 32491.5 60 28934.0 61 28934.0 62 25445.0 63 21956.0 64 19257.0 65 16558.0 66 14069.0 67 11580.0 68 11580.0 69 9829.5 70 8079.0 71 6771.5 72 5464.0 73 4470.5 74 3477.0 75 3477.0 76 2837.5 77 2198.0 78 1668.5 79 1139.0 80 878.5 81 618.0 82 618.0 83 489.0 84 360.0 85 260.5 86 161.0 87 126.0 88 91.0 89 91.0 90 65.5 91 40.0 92 28.0 93 16.0 94 11.0 95 6.0 96 6.0 97 4.5 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 811488.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.43003468490897 #Duplication Level Percentage of deduplicated Percentage of total 1 85.73293655070624 54.38043139050397 2 8.448227637588346 10.717427441564706 3 2.2905220733291562 4.35863683673454 4 1.029180211520439 2.611237460550535 5 0.5948485255830104 1.8865631304998651 6 0.36502649858848474 1.3892186079827076 7 0.2521713592371471 1.1196666644067017 8 0.19838952712917082 1.0067083669540795 9 0.15364877808706995 0.8771352591021054 >10 0.8406613154226049 9.79739594722436 >50 0.058700398881764336 2.584692692101994 >100 0.030811833781222087 3.769757142775354 >500 0.0029251740871874417 1.2874272311808796 >1k 0.0013650812406874728 1.5126775182658512 >5k 5.850348174374884E-4 2.701024310152353 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8262 1.018129658109547 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7652 0.9429591072203163 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5922 0.7297704956820064 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3189 0.3929817816159943 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1733 0.21355830277219132 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1728 0.21294215071572223 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1607 0.1980312709491699 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1454 0.17917701802121533 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1347 0.16599136401277653 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1171 0.1443028116250641 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 944 0.11632950826136679 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 912 0.11238613509996451 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 896 0.11041444851926337 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 2.4646082258764144E-4 0.0 12 0.0 0.0 0.0 7.393824677629244E-4 0.0 13 0.0 0.0 0.0 9.858432903505658E-4 0.0 14 0.0 0.0 0.0 0.0011090737016443866 0.0 15 0.0 0.0 0.0 0.0011090737016443866 0.0 16 0.0 0.0 0.0 0.0014787649355258489 0.0 17 0.0 0.0 0.0 0.0020949169919949524 0.0 18 1.2323041129382072E-4 0.0 0.0 0.0025878386371702353 0.0 19 1.2323041129382072E-4 0.0 0.0 0.0035736819275208015 0.0 20 1.2323041129382072E-4 0.0 0.0 0.005422138096928112 0.0 21 1.2323041129382072E-4 0.0 0.0 0.008009976734098348 0.0 22 1.2323041129382072E-4 0.0 0.0 0.01330888441973264 0.0 23 1.2323041129382072E-4 0.0 0.0 0.017375487992428724 0.0 24 1.2323041129382072E-4 0.0 0.0 0.022797626089356836 0.0 25 1.2323041129382072E-4 0.0 1.2323041129382072E-4 0.028835916242754053 0.0 26 1.2323041129382072E-4 0.0 1.2323041129382072E-4 0.03857111873496589 0.0 27 1.2323041129382072E-4 0.0 1.2323041129382072E-4 0.09772171615599984 0.0 28 1.2323041129382072E-4 0.0 1.2323041129382072E-4 0.22008951457076384 0.0 29 1.2323041129382072E-4 0.0 1.2323041129382072E-4 0.37991935801884935 0.0 30 1.2323041129382072E-4 0.0 1.2323041129382072E-4 0.5869464489924682 0.0 31 1.2323041129382072E-4 0.0 1.2323041129382072E-4 0.8573139713711109 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2285 0.0 25.503283 1 TGTCGGG 50 2.7011527E-4 22.2 23 TAGCGAA 45 0.0038248533 20.555555 10 ATTCCGC 55 5.1413017E-4 20.181818 6 ATTTCGG 75 9.260266E-6 19.733334 29 GGTCGCA 50 0.0070331413 18.5 15 CCGGTCT 60 9.233624E-4 18.5 9 GCGCTTT 50 0.0070331413 18.5 13 CTAATAC 140 9.458745E-11 18.5 3 CGGTTGG 75 2.0663226E-4 17.266666 33 CCCGAAT 80 3.3810321E-4 16.1875 13 GTATCAA 3655 0.0 15.943912 2 TAACGAA 70 0.0025916127 15.857143 4 AGTACCG 70 0.0025916127 15.857143 5 GGTAGCG 70 0.0025916127 15.857143 8 CTATAAG 95 7.0555834E-5 15.578948 1 TTTCGGT 85 5.3617376E-4 15.235294 30 TCTAGAC 125 2.955965E-6 14.800001 3 TACACTG 125 2.955965E-6 14.800001 5 TAGACCC 75 0.004103023 14.8 5 >>END_MODULE