##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088675_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1432633 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.614337377402308 31.0 31.0 34.0 30.0 34.0 2 31.8180224802863 31.0 31.0 34.0 30.0 34.0 3 31.889289859999035 31.0 31.0 34.0 30.0 34.0 4 35.590455476036084 37.0 35.0 37.0 33.0 37.0 5 35.4873390463573 37.0 35.0 37.0 33.0 37.0 6 35.54536367653125 37.0 35.0 37.0 33.0 37.0 7 35.397129620775175 37.0 35.0 37.0 33.0 37.0 8 35.443699119034676 37.0 35.0 37.0 33.0 37.0 9 37.03886968958554 39.0 37.0 39.0 33.0 39.0 10 36.87371573878307 39.0 37.0 39.0 33.0 39.0 11 36.966801686126175 39.0 37.0 39.0 33.0 39.0 12 36.81835473565107 39.0 37.0 39.0 32.0 39.0 13 36.85685936314464 39.0 37.0 39.0 32.0 39.0 14 37.82261053598514 40.0 37.0 41.0 32.0 41.0 15 37.83788800062542 40.0 37.0 41.0 32.0 41.0 16 37.72951900451825 40.0 37.0 41.0 32.0 41.0 17 37.7869510195563 40.0 37.0 41.0 32.0 41.0 18 37.76553450883792 40.0 37.0 41.0 32.0 41.0 19 37.81800712394591 40.0 37.0 41.0 32.0 41.0 20 37.70997526931182 40.0 37.0 41.0 32.0 41.0 21 37.649129958614665 39.0 37.0 41.0 32.0 41.0 22 37.52833349504025 39.0 36.0 41.0 32.0 41.0 23 37.34086398959119 39.0 36.0 41.0 31.0 41.0 24 37.18661513451107 39.0 36.0 41.0 31.0 41.0 25 37.36118182395631 39.0 36.0 41.0 31.0 41.0 26 37.225678174382416 39.0 36.0 41.0 31.0 41.0 27 37.115764470035245 39.0 36.0 41.0 31.0 41.0 28 36.94465854130122 39.0 35.0 41.0 31.0 41.0 29 36.83245115811237 39.0 35.0 41.0 30.0 41.0 30 36.62152065462683 39.0 35.0 40.0 30.0 41.0 31 36.43940004174132 38.0 35.0 40.0 30.0 41.0 32 36.24790228900214 38.0 35.0 40.0 30.0 41.0 33 36.08742364583254 38.0 35.0 40.0 30.0 41.0 34 35.89921843207576 38.0 35.0 40.0 29.0 41.0 35 35.737361208348545 38.0 35.0 40.0 28.0 41.0 36 35.53572478087549 38.0 35.0 40.0 27.0 41.0 37 35.43398413969244 38.0 34.0 40.0 26.0 41.0 38 35.240591972961674 38.0 34.0 40.0 25.0 41.0 39 35.12128507440496 38.0 34.0 40.0 25.0 41.0 40 34.92798015960822 38.0 34.0 40.0 24.0 41.0 41 34.757265817554114 38.0 34.0 40.0 23.0 41.0 42 34.45467541233519 38.0 33.0 40.0 22.0 41.0 43 34.08394194465715 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 1.0 14 4.0 15 9.0 16 9.0 17 35.0 18 88.0 19 238.0 20 484.0 21 1005.0 22 1904.0 23 3203.0 24 5315.0 25 8348.0 26 12170.0 27 16970.0 28 23120.0 29 30467.0 30 38343.0 31 47588.0 32 59078.0 33 73026.0 34 90357.0 35 110590.0 36 143501.0 37 201140.0 38 262312.0 39 303326.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.62601308220598 21.219740156760313 14.3297690336604 22.824477727373306 2 18.84704596362083 23.755281359566617 35.11366832957219 22.284004347240362 3 20.092235764497957 24.41609260710873 33.03072035894748 22.46095126944584 4 13.71572482275642 16.253988285904345 35.94926265135593 34.08102423998331 5 12.54082517993094 38.67089477905367 34.874318824151054 13.913961216864331 6 32.23707676704362 36.82345722875293 13.378304143489645 17.561161860713806 7 25.562234012479117 33.46034888209332 21.406459295576745 19.570957809850814 8 27.09486658481272 34.34326865289296 18.971013511485495 19.590851250808825 9 24.306224971782726 14.481587398866283 22.213016173716507 38.99917145563448 10 16.422908030179396 27.890813627774875 33.397736894236 22.28854144780973 11 32.470493140950964 22.568236247524663 23.741879462500165 21.219391149024208 12 20.982833705491917 27.469212282559457 31.14628798861955 20.401666023329074 13 31.786507779731444 21.094655784140112 26.53233591575791 20.586500520370535 14 20.098657506842297 23.51167395976499 28.28568098040461 28.1039875529881 15 22.368464219377888 29.717171110814846 26.08776986150675 21.82659480830052 16 21.144354485761532 28.710353593697757 27.27195311011264 22.873338810428073 17 21.21443523917151 27.019411112266717 27.389568717180186 24.37658493138159 18 22.768357283407546 25.738273514570725 30.041259694562388 21.45210950745934 19 22.344801494869934 24.87852785744849 31.543179586118708 21.23349106156287 20 23.523330818150914 24.47353928047169 31.115575307842274 20.88755459353512 21 21.991047253553422 25.590852646839767 31.94544590275388 20.472654196852925 22 20.62565918836157 25.91508083368176 31.299921194053187 22.159338783903486 23 21.768799127201454 26.11973897013401 32.17928108594455 19.93218081671998 24 21.619703022337195 26.20035975717438 29.781737541994357 22.398199678494073 25 21.45127188889269 26.57959156322659 30.89374599077363 21.075390557107088 26 21.171367684536097 27.43633575381832 30.703606576143365 20.68868998550222 27 20.069271055462217 27.34719917801698 30.565399512645598 22.018130253875206 28 20.665655474919255 26.78145763779 30.637853518661096 21.91503336862965 29 20.82368617782782 26.68408447941657 30.064364006692575 22.42786533606304 30 21.006426628452644 27.055149504443914 31.76312426141238 20.17529960569106 31 21.70681535326912 26.779084385184483 31.421306084670675 20.092794176875724 32 21.44945704866494 26.65972373943641 30.194962701543243 21.69585651035541 33 20.793601710975526 26.578614341565494 31.068389461920816 21.559394485538167 34 20.002401173224406 27.188959070466755 31.718939882021424 21.08969987428741 35 19.622122343963877 29.279934219021897 30.342174164632535 20.75576927238169 36 21.82729282377273 26.799745643161927 30.380216007868032 20.99274552519731 37 20.952888841734065 27.657187849225867 30.255201436795048 21.13472187224502 38 20.726452622548834 26.000727332122043 31.67622133512211 21.59659871020701 39 20.196658879140713 25.800606296239163 32.490735589645084 21.511999234975043 40 19.149845075465944 26.332075276780586 31.95514831781761 22.56293132993586 41 20.64736746954733 25.446014436355995 31.938814755767876 21.9678033383288 42 19.299359989613528 27.473121169203836 31.246383407334605 21.981135433848024 43 19.670774022376982 27.36813964218331 30.384194696059634 22.57689163938008 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 521.0 1 463.0 2 405.0 3 850.0 4 1295.0 5 1295.0 6 2034.0 7 2773.0 8 3043.5 9 3314.0 10 5227.5 11 7141.0 12 7141.0 13 13310.0 14 19479.0 15 30234.0 16 40989.0 17 37924.0 18 34859.0 19 34859.0 20 36945.0 21 39031.0 22 31046.0 23 23061.0 24 25413.0 25 27765.0 26 27765.0 27 30415.0 28 33065.0 29 34869.0 30 36673.0 31 39984.0 32 43295.0 33 43295.0 34 47386.0 35 51477.0 36 55862.0 37 60247.0 38 63731.5 39 67216.0 40 67216.0 41 70019.0 42 72822.0 43 76419.5 44 80017.0 45 87193.5 46 94370.0 47 94370.0 48 126074.0 49 157778.0 50 145755.5 51 133733.0 52 120060.5 53 106388.0 54 106388.0 55 94030.5 56 81673.0 57 69379.5 58 57086.0 59 50714.5 60 44343.0 61 44343.0 62 39030.0 63 33717.0 64 29224.0 65 24731.0 66 21426.5 67 18122.0 68 18122.0 69 15467.0 70 12812.0 71 10958.0 72 9104.0 73 7427.0 74 5750.0 75 5750.0 76 4652.0 77 3554.0 78 2731.0 79 1908.0 80 1468.0 81 1028.0 82 1028.0 83 800.0 84 572.0 85 420.5 86 269.0 87 201.0 88 133.0 89 133.0 90 104.0 91 75.0 92 52.5 93 30.0 94 20.0 95 10.0 96 10.0 97 5.0 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1432633.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.038529458716766 #Duplication Level Percentage of deduplicated Percentage of total 1 82.48838434247997 43.75062602950575 2 10.092920121920075 10.706272824218663 3 2.895972568936782 4.607943792275676 4 1.2647538336756166 2.6832273386171663 5 0.7066454900922029 1.8739718821562328 6 0.4552707299847022 1.448813401439107 7 0.3226238954222849 1.1978047887008572 8 0.24153111243541114 1.024836401768175 9 0.1853471185176294 0.8847484745026998 >10 1.181706509984646 11.87455657597992 >50 0.09786261820566594 3.6046110635107884 >100 0.056301547773993016 5.422058806192651 >500 0.006065247978563949 2.323384301567524 >1k 0.003955596507759097 4.117725402901526 >5k 2.637064338506065E-4 0.8844427433381837 >10k+ 3.9555965077590975E-4 3.594976173325111 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19524 1.3628054079446725 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17734 1.237860638418911 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14148 0.987552290084062 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7607 0.530980369710875 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5040 0.35179979799432237 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4277 0.29854121746462636 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4186 0.2921892766675066 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3937 0.2748086914094538 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3649 0.25470584580977823 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3627 0.25317021177091414 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2452 0.17115339378612665 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2370 0.16542966691399683 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2322 0.1620791926473842 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2166 0.15119015128089328 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2065 0.14414019501156264 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1919 0.13394916911728266 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1878 0.13108730568121774 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1839 0.128365045339595 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1761 0.12292052465634952 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1623 0.11328791113983831 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1522 0.10623795487050766 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1502 0.10484192392608575 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1437 0.10030482335671453 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 6.98015472210957E-5 0.0 3 0.0 0.0 0.0 6.98015472210957E-5 0.0 4 0.0 0.0 0.0 6.98015472210957E-5 0.0 5 0.0 0.0 0.0 6.98015472210957E-5 0.0 6 6.98015472210957E-5 0.0 0.0 6.98015472210957E-5 0.0 7 6.98015472210957E-5 0.0 0.0 6.98015472210957E-5 0.0 8 1.396030944421914E-4 0.0 0.0 6.98015472210957E-5 0.0 9 1.396030944421914E-4 0.0 0.0 5.584123777687656E-4 0.0 10 1.396030944421914E-4 0.0 0.0 7.678170194320527E-4 0.0 11 1.396030944421914E-4 0.0 0.0 0.0010470232083164355 0.0 12 2.094046416632871E-4 0.0 0.0 0.0013262293972008184 0.0 13 2.094046416632871E-4 0.0 0.0 0.0015356340388641054 0.0 14 2.094046416632871E-4 0.0 0.0 0.0018148402277484883 0.0 15 2.094046416632871E-4 0.0 0.0 0.0020242448694117753 0.0 16 2.094046416632871E-4 0.0 0.0 0.002792061888843828 0.0 17 2.094046416632871E-4 0.0 0.0 0.004257894380486838 0.0 18 2.094046416632871E-4 0.0 0.0 0.0048861083054767 0.0 19 2.094046416632871E-4 0.0 0.0 0.006561345438782996 0.0 20 2.094046416632871E-4 0.0 0.0 0.01102864446093312 0.0 21 2.094046416632871E-4 0.0 0.0 0.017520188352495022 0.0 22 2.094046416632871E-4 0.0 0.0 0.02938645138008129 0.0 23 2.094046416632871E-4 0.0 0.0 0.035738392177201 0.0 24 2.094046416632871E-4 0.0 0.0 0.0471160443742396 0.0 25 2.094046416632871E-4 0.0 0.0 0.05535262694632889 0.0 26 2.094046416632871E-4 0.0 0.0 0.06959214257943241 0.0 27 2.094046416632871E-4 0.0 0.0 0.14002190372551798 0.0 28 2.094046416632871E-4 0.0 0.0 0.28304527398154306 0.0 29 2.094046416632871E-4 0.0 0.0 0.4761861551423149 0.0 30 2.094046416632871E-4 0.0 0.0 0.7408038206574887 0.0 31 2.094046416632871E-4 0.0 0.0 1.0337609143444273 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6130 0.0 22.362968 1 GTATTGG 620 0.0 19.693548 1 TAGCGCG 60 9.238333E-4 18.5 34 TGAACGA 70 1.21946345E-4 18.5 5 CTAATAC 280 0.0 17.839287 3 CTCTAAT 255 0.0 16.686274 1 TAAACGT 80 3.3832938E-4 16.1875 4 AACTGCG 120 1.9362142E-6 15.416666 7 ACGTATA 85 5.365296E-4 15.235294 29 GTATCAA 9000 0.0 15.2316675 2 TGGACCC 885 0.0 14.841807 5 CTAGTAC 250 0.0 14.800001 3 TAGGTCG 100 1.0936626E-4 14.8 21 TGTGCGC 150 8.104507E-8 14.8 10 AATGCGA 75 0.0041050627 14.8 20 ATTGGAC 725 0.0 14.8 3 ACCGTCT 75 0.0041050627 14.8 8 CCGCGCA 75 0.0041050627 14.8 37 AATACTG 365 0.0 14.698631 5 TAATACA 265 0.0 14.6603775 4 >>END_MODULE