##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088674_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1197549 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.636252044801505 31.0 31.0 34.0 30.0 34.0 2 31.839588192215935 31.0 31.0 34.0 30.0 34.0 3 31.913033203651793 31.0 31.0 34.0 30.0 34.0 4 35.620929080981234 37.0 35.0 37.0 33.0 37.0 5 35.506567163431306 37.0 35.0 37.0 33.0 37.0 6 35.55592965298288 37.0 35.0 37.0 33.0 37.0 7 35.42474838190337 37.0 35.0 37.0 33.0 37.0 8 35.453966393024416 37.0 35.0 37.0 33.0 37.0 9 37.05965684911432 39.0 37.0 39.0 33.0 39.0 10 36.88442644100576 39.0 37.0 39.0 33.0 39.0 11 36.97453465369684 39.0 37.0 39.0 33.0 39.0 12 36.83063072993255 39.0 37.0 39.0 32.0 39.0 13 36.8723551186632 39.0 37.0 39.0 33.0 39.0 14 37.8674050080623 40.0 37.0 41.0 32.0 41.0 15 37.88433542176562 40.0 37.0 41.0 33.0 41.0 16 37.77611688540511 40.0 37.0 41.0 32.0 41.0 17 37.79932345148299 40.0 37.0 41.0 32.0 41.0 18 37.77387480595784 40.0 37.0 41.0 32.0 41.0 19 37.81908464705828 40.0 37.0 41.0 32.0 41.0 20 37.71024818191155 40.0 37.0 41.0 32.0 41.0 21 37.642289376050584 39.0 37.0 41.0 32.0 41.0 22 37.51371843657337 39.0 36.0 41.0 32.0 41.0 23 37.34055725485972 39.0 36.0 41.0 31.0 41.0 24 37.19520871379793 39.0 36.0 41.0 31.0 41.0 25 37.3879089707394 39.0 36.0 41.0 31.0 41.0 26 37.26815437197142 39.0 36.0 41.0 31.0 41.0 27 37.15895717001977 39.0 36.0 41.0 31.0 41.0 28 36.98870275871801 39.0 36.0 41.0 31.0 41.0 29 36.881815274364556 39.0 35.0 41.0 30.0 41.0 30 36.69121931545181 39.0 35.0 40.0 30.0 41.0 31 36.54548749153479 39.0 35.0 40.0 30.0 41.0 32 36.38127709179332 38.0 35.0 40.0 30.0 41.0 33 36.23925451067138 38.0 35.0 40.0 30.0 41.0 34 36.072005404371765 38.0 35.0 40.0 30.0 41.0 35 35.93367119007239 38.0 35.0 40.0 29.0 41.0 36 35.74658239454085 38.0 35.0 40.0 27.0 41.0 37 35.68423588512871 38.0 35.0 40.0 27.0 41.0 38 35.50299820717148 38.0 35.0 40.0 26.0 41.0 39 35.40639088671946 38.0 34.0 40.0 26.0 41.0 40 35.24557993034105 38.0 34.0 40.0 25.0 41.0 41 35.10851831532572 38.0 34.0 40.0 24.0 41.0 42 34.85742629320387 38.0 34.0 40.0 23.0 41.0 43 34.50147927141186 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 3.0 15 5.0 16 14.0 17 31.0 18 81.0 19 193.0 20 381.0 21 805.0 22 1467.0 23 2611.0 24 4262.0 25 6532.0 26 9685.0 27 13580.0 28 18167.0 29 24260.0 30 30717.0 31 38695.0 32 47896.0 33 59444.0 34 73451.0 35 91993.0 36 118449.0 37 165389.0 38 223834.0 39 265603.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.23338585728016 21.291988887302317 14.155579437668104 23.31904581774942 2 18.943692491914735 23.144689695369458 35.271124605339736 22.640493207376068 3 19.71743953692083 24.474489144076777 32.52843933734653 23.279631981655864 4 13.965942103412887 16.557234818784032 35.89907385835569 33.57774921944739 5 13.012661694845054 38.14031826672645 34.916483584387784 13.930536454040713 6 32.47065464544666 36.952558934957985 13.859975666966445 16.71681075262891 7 26.020062644618296 32.95372464926278 21.691471497199696 19.33474120891922 8 26.5114830374373 34.88500261784695 19.1523687130965 19.451145631619248 9 24.580873099973363 14.684075557659854 21.935803879423723 38.79924746294306 10 16.539699001878002 27.839445400563985 33.49958957838051 22.121266019177504 11 33.06111065183971 22.665293862714595 23.374826416288602 20.898769069157087 12 20.844324532858362 27.322806832956314 30.93961082177013 20.893257812415193 13 31.25258340159776 21.083646681680666 26.33503931780662 21.328730598914948 14 20.44935113302253 23.26627135925127 27.814978760785568 28.469398746940627 15 22.84841789354757 29.651980837527315 25.37750021084732 22.12210105807779 16 21.78558038126206 28.366521954425245 26.870048741220607 22.977848923092083 17 21.621745749025717 27.252246045882046 27.315959513973958 23.810048691118276 18 22.820694602058037 25.927957853916624 29.340511327720204 21.91083621630514 19 22.64992914694931 25.376080644716836 30.621711512430807 21.35227869590305 20 23.511104764815467 24.971170281967588 30.300889566940477 21.21683538627647 21 22.298127258258326 25.8537228956811 30.836316509804607 21.011833336255968 22 21.223599201368796 26.197758922599405 30.349906350387336 22.228735525644463 23 21.980060941138944 26.396999204207926 31.001153188721297 20.621786665931833 24 21.984737158980554 26.45929310616935 29.105113861729247 22.450855873120847 25 21.931628684922284 26.603170308688828 30.009962014080426 21.455238992308455 26 21.58316695183245 27.242726602418777 29.985495374302012 21.188611071446765 27 20.745288919284306 27.229867003354354 29.790012767744784 22.23483130961656 28 21.21182515287475 26.81869384885295 29.913765532767343 22.05571546550496 29 21.36530530274753 26.787713905652293 29.376083984872437 22.47089680672774 30 21.534567687835736 26.99605611127394 30.70730299971024 20.762073201180076 31 22.13078546264078 26.6766537319141 30.453618181802998 20.738942623642124 32 21.679363433145532 26.692769982689647 29.664088901581483 21.963777682583345 33 21.305516517486968 26.574528474408982 30.202020961146474 21.917934046957576 34 20.725247985677413 26.795312759644908 30.742291129632278 21.737148125045405 35 20.41962374817231 28.369611598356308 29.829343099948314 21.38142155352307 36 22.179802246087636 26.538538297806603 29.71352320447848 21.568136251627283 37 21.38142155352307 26.865289019488976 29.92311796845056 21.830171458537396 38 21.097424823535405 25.91518175874223 31.093007467752887 21.89438594996948 39 20.650344996321653 25.62817888871353 31.721791759669127 21.99968435529569 40 19.803615551430465 26.07717930539794 31.3748330965998 22.74437204657179 41 20.870795265997465 25.253580438044704 31.420175708885402 22.45544858707243 42 19.795682681877736 26.9877892261611 30.8159415606376 22.40058653132356 43 19.920688005250724 26.832137975147575 30.338549821343424 22.908624198258277 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 484.0 1 424.5 2 365.0 3 670.5 4 976.0 5 976.0 6 1501.5 7 2027.0 8 2223.5 9 2420.0 10 3783.0 11 5146.0 12 5146.0 13 9431.0 14 13716.0 15 21092.5 16 28469.0 17 26298.5 18 24128.0 19 24128.0 20 26199.0 21 28270.0 22 22936.5 23 17603.0 24 19904.5 25 22206.0 26 22206.0 27 24516.0 28 26826.0 29 28952.5 30 31079.0 31 34102.5 32 37126.0 33 37126.0 34 41417.0 35 45708.0 36 49910.5 37 54113.0 38 57443.5 39 60774.0 40 60774.0 41 63028.0 42 65282.0 43 69599.0 44 73916.0 45 78230.5 46 82545.0 47 82545.0 48 102070.0 49 121595.0 50 113044.5 51 104494.0 52 94487.5 53 84481.0 54 84481.0 55 76390.5 56 68300.0 57 59730.5 58 51161.0 59 46445.0 60 41729.0 61 41729.0 62 36715.5 63 31702.0 64 27751.5 65 23801.0 66 20238.0 67 16675.0 68 16675.0 69 14196.0 70 11717.0 71 9610.5 72 7504.0 73 6159.0 74 4814.0 75 4814.0 76 3874.5 77 2935.0 78 2279.0 79 1623.0 80 1240.5 81 858.0 82 858.0 83 667.5 84 477.0 85 363.0 86 249.0 87 193.0 88 137.0 89 137.0 90 107.5 91 78.0 92 52.5 93 27.0 94 16.5 95 6.0 96 6.0 97 5.5 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1197549.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.6762125670239 #Duplication Level Percentage of deduplicated Percentage of total 1 84.41310587553006 49.530413437952966 2 9.167234136513134 10.75797157691445 3 2.586437449318697 4.552870607026049 4 1.0722581075060638 2.5166417857096226 5 0.6151526047856762 1.8047412499781392 6 0.38122737666907536 1.3421387153882132 7 0.2824208062887962 1.159996828420618 8 0.19781886749641758 0.9285809535190188 9 0.15912561861198277 0.8403199760282288 >10 0.9915686326210557 10.94029102454386 >50 0.08212701776637155 3.3179144023677845 >100 0.04424456802545169 4.724237089773851 >500 0.004424453036998511 1.7589006177958697 >1k 0.002283588664257296 2.427271128229086 >5k 2.85448583032162E-4 1.2309708223102171 >10k+ 2.85448583032162E-4 2.1667397840419245 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13398 1.1187851186047502 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12475 1.0417110281082445 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9590 0.8008023053753959 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5109 0.4266213741567151 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2965 0.24758903393514586 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2788 0.23280884540006294 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2638 0.22028326189575542 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2420 0.20207941386949513 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2405 0.20082685551906435 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2247 0.18763324089452707 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1603 0.13385673571603335 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1537 0.12834547897413803 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1490 0.12442079614278831 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1460 0.12191567944192681 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1418 0.11840851606072068 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1290 0.10772001813704492 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1271 0.1061334442264993 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1202 0.10037167581451781 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 8.350389002871699E-5 0.0 0.0 0.0 0.0 7 8.350389002871699E-5 0.0 0.0 0.0 0.0 8 8.350389002871699E-5 0.0 0.0 8.350389002871699E-5 0.0 9 8.350389002871699E-5 0.0 0.0 8.350389002871699E-5 0.0 10 8.350389002871699E-5 0.0 0.0 1.6700778005743398E-4 0.0 11 8.350389002871699E-5 0.0 0.0 5.845272302010189E-4 0.0 12 8.350389002871699E-5 0.0 0.0 7.515350102584528E-4 0.0 13 8.350389002871699E-5 0.0 0.0 0.0010855505703733209 0.0 14 8.350389002871699E-5 0.0 0.0 0.0015030700205169057 0.0 15 8.350389002871699E-5 0.0 0.0 0.0016700778005743397 0.0 16 8.350389002871699E-5 0.0 0.0 0.0029226361510050944 0.0 17 8.350389002871699E-5 0.0 0.0 0.0035071633812061133 0.0 18 8.350389002871699E-5 0.0 0.0 0.00417519450143585 0.0 19 8.350389002871699E-5 0.0 0.0 0.004759721731636868 0.0 20 1.6700778005743398E-4 0.0 0.0 0.008767908453015283 0.0 21 1.6700778005743398E-4 0.0 0.0 0.014863692425111624 0.0 22 1.6700778005743398E-4 8.350389002871699E-5 0.0 0.02329758531801204 0.0 23 1.6700778005743398E-4 8.350389002871699E-5 0.0 0.0299778965203094 0.0 24 1.6700778005743398E-4 8.350389002871699E-5 0.0 0.03874580497332468 0.0 25 1.6700778005743398E-4 8.350389002871699E-5 0.0 0.045092100615507176 0.0 26 1.6700778005743398E-4 8.350389002871699E-5 0.0 0.05861973080015932 0.0 27 1.6700778005743398E-4 8.350389002871699E-5 0.0 0.12792795952399444 0.0 28 1.6700778005743398E-4 8.350389002871699E-5 0.0 0.2764813798850819 0.0 29 1.6700778005743398E-4 8.350389002871699E-5 0.0 0.4600229301682019 0.0 30 1.6700778005743398E-4 1.6700778005743398E-4 0.0 0.6986770478702751 0.0 31 1.6700778005743398E-4 1.6700778005743398E-4 0.0 1.029769971834138 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4035 0.0 21.044611 1 ATTAGAG 150 2.5102054E-10 17.266666 3 GTATTGG 415 0.0 16.939758 1 CGGTTGG 110 7.8082667E-7 16.818182 33 TTGGACC 615 0.0 16.544716 4 ATTGGAC 470 0.0 16.138298 3 TTAACGG 140 3.4729965E-8 15.857142 35 GTATTAG 235 0.0 15.744681 1 TACACTG 230 0.0 15.282609 5 CTAGACC 85 5.3643854E-4 15.235293 3 TAAGAGT 85 5.3643854E-4 15.235293 6 GTCTAGA 110 1.4518902E-5 15.136364 1 AATCTAA 110 1.4518902E-5 15.136364 21 TGGACCC 600 0.0 15.108334 5 ATAGGCG 75 0.0041045398 14.8 32 ATAGGAC 75 0.0041045398 14.8 3 TGAACCG 75 0.0041045398 14.8 5 GTCTAAC 75 0.0041045398 14.8 31 CTAGTAC 150 8.1006874E-8 14.8 3 TGCGACG 75 0.0041045398 14.8 22 >>END_MODULE