##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088672_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 647648 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.610859602747173 31.0 31.0 34.0 30.0 34.0 2 31.821069469835468 31.0 31.0 34.0 30.0 34.0 3 31.897850375512625 31.0 31.0 34.0 30.0 34.0 4 35.60140848115025 37.0 35.0 37.0 33.0 37.0 5 35.48958848016206 37.0 35.0 37.0 33.0 37.0 6 35.54792418103661 37.0 35.0 37.0 33.0 37.0 7 35.406290145264094 37.0 35.0 37.0 33.0 37.0 8 35.442193907801766 37.0 35.0 37.0 33.0 37.0 9 37.034490958051286 39.0 37.0 39.0 33.0 39.0 10 36.87210490883937 39.0 37.0 39.0 33.0 39.0 11 36.96656825930135 39.0 37.0 39.0 33.0 39.0 12 36.829205062008995 39.0 37.0 39.0 32.0 39.0 13 36.85874425613914 39.0 37.0 39.0 32.0 39.0 14 37.85655479519739 40.0 37.0 41.0 32.0 41.0 15 37.86948929047878 40.0 37.0 41.0 33.0 41.0 16 37.74131627056673 40.0 37.0 41.0 32.0 41.0 17 37.79062546321459 40.0 37.0 41.0 32.0 41.0 18 37.751446773556005 40.0 37.0 41.0 32.0 41.0 19 37.80503761302436 40.0 37.0 41.0 32.0 41.0 20 37.69023759820149 40.0 37.0 41.0 32.0 41.0 21 37.622821347398585 39.0 37.0 41.0 32.0 41.0 22 37.48331501062305 39.0 36.0 41.0 32.0 41.0 23 37.30129638322052 39.0 36.0 41.0 31.0 41.0 24 37.1388454839666 39.0 36.0 41.0 31.0 41.0 25 37.323763834675624 39.0 36.0 41.0 31.0 41.0 26 37.19646320223331 39.0 36.0 41.0 31.0 41.0 27 37.08722176243886 39.0 36.0 41.0 31.0 41.0 28 36.90309550867138 39.0 35.0 41.0 30.0 41.0 29 36.79094662532734 39.0 35.0 41.0 30.0 41.0 30 36.57787563614803 39.0 35.0 40.0 30.0 41.0 31 36.40816616433618 39.0 35.0 40.0 30.0 41.0 32 36.231174959237116 38.0 35.0 40.0 30.0 41.0 33 36.07784938732151 38.0 35.0 40.0 30.0 41.0 34 35.88977654528386 38.0 35.0 40.0 29.0 41.0 35 35.74050564504175 38.0 35.0 40.0 28.0 41.0 36 35.53996306635703 38.0 35.0 40.0 27.0 41.0 37 35.443932506546766 38.0 34.0 40.0 26.0 41.0 38 35.25060835515589 38.0 34.0 40.0 25.0 41.0 39 35.145857008745494 38.0 34.0 40.0 25.0 41.0 40 34.954144844112854 38.0 34.0 40.0 24.0 41.0 41 34.79737758782549 38.0 34.0 40.0 23.0 41.0 42 34.51983948070557 38.0 33.0 40.0 22.0 41.0 43 34.16126661396314 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 6.0 16 6.0 17 19.0 18 38.0 19 99.0 20 222.0 21 451.0 22 867.0 23 1470.0 24 2506.0 25 3815.0 26 5634.0 27 7958.0 28 10542.0 29 14009.0 30 17468.0 31 21572.0 32 26406.0 33 32747.0 34 40405.0 35 49696.0 36 63946.0 37 89698.0 38 119498.0 39 138570.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.475153169623 21.433093285241366 13.820933593556994 23.270819951578638 2 18.890508424329266 23.364389297890213 35.05314615346608 22.69195612431444 3 20.00592914669697 24.832625129700084 32.44740970403676 22.714036019566183 4 13.779244280843916 16.565171204110875 36.142163644448836 33.51342087059637 5 12.569636592717032 38.60476678689659 35.07167473689412 13.753921883492268 6 32.26629280102772 36.74403379613617 13.694167201936855 17.295506200899254 7 25.733114284302584 33.09405726567518 21.98632590543011 19.186502544592123 8 26.59515662829191 34.65833292158704 19.394794703295617 19.351715746825434 9 24.336367903552546 14.703357379317161 22.214845101042542 38.74542961608775 10 16.384671920549433 27.666263155294235 34.007825238401104 21.941239685755225 11 32.174730717920845 22.59097534463165 24.033425564504174 21.200868372943326 12 20.687317802262957 27.39034166707841 31.45180715450368 20.470533376154947 13 31.085404417214292 21.164583230396758 26.743230890854292 21.00678146153466 14 20.118953505607983 23.422908740550422 28.25192079648204 28.206216957359555 15 22.5111480310292 29.521128761302435 26.24481199664015 21.72291121102821 16 21.284555808093288 28.5991773308958 27.57084095063985 22.545425910371065 17 21.204882899352732 27.099906121843965 27.538107119916994 24.15710385888631 18 22.620312268392706 25.88427664410297 29.945742131528235 21.549668955976088 19 22.2982237264687 25.18544023914225 31.152107317555217 21.364228716833836 20 23.381065022975445 24.682543603933 31.03151712041109 20.904874252680468 21 22.007942586096153 25.78731039082959 31.713677800286575 20.491069222787686 22 20.713412223924106 26.044548890755472 31.171871139878455 22.070167745441967 23 21.628261030683333 26.135956569000445 32.21240550422452 20.023376896091705 24 21.676744157320027 26.327573002618703 29.670747072483817 22.32493576757745 25 21.52496417807204 26.65290404664262 30.770109689213893 21.052022086071446 26 21.226190770294977 27.297235535352538 30.682098917930727 20.794474776421758 27 20.292967784969612 27.30325732496665 30.372825979544444 22.030948910519292 28 20.761277731113196 26.79032437373388 30.726876327881815 21.72152156727111 29 21.072094718118485 26.750642324225502 29.95114630169475 22.226116655961263 30 21.173384307525076 26.906282425021 31.538119472305944 20.382213795147983 31 21.80659864617817 26.627890459014775 31.156276248826526 20.409234645980533 32 21.344001679924897 26.489543702752112 30.293925095113394 21.872529522209597 33 20.93652724937003 26.543276594693417 30.97438732150798 21.545808834428577 34 20.1262105341173 27.10268540935817 31.552015909876967 21.21908814664756 35 19.963313404812492 28.98719674885123 30.225523741291564 20.82396610504472 36 22.099813478926826 26.70046074410791 30.04641410148723 21.153311675478037 37 21.11702653293147 27.368724986412374 30.12639581995158 21.38785266070458 38 20.95304856959336 26.053349967883786 31.30821063293641 21.685390829586442 39 20.468217303226442 25.923649883887546 31.888772913681507 21.71935989920451 40 19.446520332032215 26.58002495182568 31.481916102574235 22.49153861356786 41 21.034574336676716 25.617310637877367 31.36163471515391 21.986480310292013 42 19.66685606996393 27.493638519689707 30.80531399772716 22.0341914126192 43 20.16944389544938 27.391422501111716 29.844298137259745 22.59483546617916 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 211.0 1 197.5 2 184.0 3 371.5 4 559.0 5 559.0 6 890.0 7 1221.0 8 1321.0 9 1421.0 10 2252.0 11 3083.0 12 3083.0 13 5783.0 14 8483.0 15 12354.5 16 16226.0 17 15187.5 18 14149.0 19 14149.0 20 15236.0 21 16323.0 22 13289.0 23 10255.0 24 11216.0 25 12177.0 26 12177.0 27 13516.5 28 14856.0 29 16092.5 30 17329.0 31 18966.5 32 20604.0 33 20604.0 34 22893.5 35 25183.0 36 27286.0 37 29389.0 38 30947.5 39 32506.0 40 32506.0 41 33276.0 42 34046.0 43 36112.0 44 38178.0 45 40820.0 46 43462.0 47 43462.0 48 56594.0 49 69726.0 50 64415.0 51 59104.0 52 53361.5 53 47619.0 54 47619.0 55 42222.0 56 36825.0 57 31053.5 58 25282.0 59 22584.0 60 19886.0 61 19886.0 62 17555.5 63 15225.0 64 13233.5 65 11242.0 66 9550.5 67 7859.0 68 7859.0 69 6752.0 70 5645.0 71 4623.5 72 3602.0 73 3031.0 74 2460.0 75 2460.0 76 1986.0 77 1512.0 78 1186.0 79 860.0 80 647.5 81 435.0 82 435.0 83 347.5 84 260.0 85 197.0 86 134.0 87 100.0 88 66.0 89 66.0 90 56.5 91 47.0 92 27.5 93 8.0 94 7.0 95 6.0 96 6.0 97 3.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 647648.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.88225575293879 #Duplication Level Percentage of deduplicated Percentage of total 1 87.62214729294958 55.098782756969285 2 7.309697807655128 9.193005740353316 3 1.8761558955031312 3.5393074456023537 4 0.8686780449083071 2.1849773994754806 5 0.49923391609478324 1.5696477396206672 6 0.3545835418615224 1.3378207779071478 7 0.24023976291623708 1.057477274960694 8 0.17488326236393478 0.8797643224701792 9 0.143121051102574 0.8099797085155331 >10 0.8002769531246975 9.290720518030442 >50 0.06545754040490603 2.8227896096330234 >100 0.039126832688288385 4.977402242635841 >500 0.0036912106309598793 1.7863312655879542 >1k 0.001968645669845269 2.291870441322175 >5k 7.382421261919759E-4 3.160122756915904 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7583 1.1708520677899106 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7222 1.1151119126439053 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5617 0.8672921092939375 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3372 0.520653194327783 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2075 0.3203900884431049 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1843 0.28456816048223726 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1834 0.2831785167251346 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1616 0.24951825683087106 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1561 0.24102598942635506 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1506 0.23253372202183903 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1004 0.15502248134789268 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 969 0.14961831118138247 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 898 0.13865556598646178 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 891 0.13757473195315975 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 878 0.13556746874845596 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 875 0.13510425416275507 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 874 0.13494984930085477 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 872 0.1346410395770542 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 857 0.13232496664854984 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 664 0.10252482830179356 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 658 0.10159839913039181 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 655 0.10113518454469095 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 1.5440486190029153E-4 0.0 0.0 0.0 0.0 9 1.5440486190029153E-4 0.0 0.0 0.0 0.0 10 1.5440486190029153E-4 0.0 0.0 1.5440486190029153E-4 0.0 11 1.5440486190029153E-4 0.0 0.0 6.176194476011661E-4 0.0 12 1.5440486190029153E-4 0.0 0.0 0.0010808340333020405 0.0 13 1.5440486190029153E-4 0.0 0.0 0.0013896437571026237 0.0 14 3.0880972380058306E-4 0.0 0.0 0.0016984534809032067 0.0 15 3.0880972380058306E-4 0.0 0.0 0.0024704777904046645 0.0 16 3.0880972380058306E-4 0.0 0.0 0.003860121547507288 0.0 17 3.0880972380058306E-4 0.0 0.0 0.006793813923612827 0.0 18 3.0880972380058306E-4 0.0 0.0 0.007720243095014576 0.0 19 3.0880972380058306E-4 0.0 0.0 0.008801077128316617 0.0 20 3.0880972380058306E-4 0.0 0.0 0.013433222985325361 0.0 21 3.0880972380058306E-4 0.0 0.0 0.02146227580414052 0.0 22 3.0880972380058306E-4 0.0 0.0 0.03551311823706705 0.0 23 3.0880972380058306E-4 0.0 0.0 0.04292455160828104 0.0 24 4.6321458570087456E-4 0.0 0.0 0.05527694056030436 0.0 25 4.6321458570087456E-4 0.0 0.0 0.06346039824101982 0.0 26 4.6321458570087456E-4 0.0 0.0 0.07782005039774692 0.0 27 4.6321458570087456E-4 0.0 0.0 0.1273840110677405 0.0 28 4.6321458570087456E-4 0.0 0.0 0.23747467760264834 0.0 29 4.6321458570087456E-4 0.0 0.0 0.3685644053559958 0.0 30 4.6321458570087456E-4 0.0 0.0 0.5748493008547854 0.0 31 4.6321458570087456E-4 0.0 0.0 0.8174193389001433 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2600 0.0 22.128845 1 GTATTGG 235 0.0 21.25532 1 TACTCCG 105 9.804353E-10 21.142857 5 GTTCCGA 45 0.0038240317 20.555555 33 TAGGGGT 55 5.139761E-4 20.181818 4 TTGTCGG 85 1.2435903E-6 19.588236 22 CTAAGGT 85 1.2435903E-6 19.588236 4 ATTGGAC 315 0.0 18.793652 3 TGGACCC 395 0.0 18.734177 5 TCGGGTA 60 9.230882E-4 18.5 25 AGTTCCG 50 0.007031646 18.5 32 GTCGGGT 70 1.2181545E-4 18.5 24 GGACCCT 400 0.0 18.0375 6 TCTACAC 85 2.7201431E-5 17.411764 3 TACACAG 85 2.7201431E-5 17.411764 5 TATTGGA 305 0.0 16.983606 2 TTGGACC 425 0.0 16.541178 4 TCCGGTC 115 1.2400706E-6 16.086956 8 AGGACTA 70 0.0025908551 15.857142 5 TTCCGAC 70 0.0025908551 15.857142 34 >>END_MODULE