##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088666_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1030922 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.238428319504287 31.0 31.0 33.0 30.0 34.0 2 31.4526957422579 31.0 31.0 34.0 30.0 34.0 3 31.48412683015786 31.0 31.0 34.0 28.0 34.0 4 35.24319783649975 37.0 35.0 37.0 33.0 37.0 5 35.12682724784222 37.0 35.0 37.0 32.0 37.0 6 35.23761545490348 37.0 35.0 37.0 32.0 37.0 7 35.06190866040302 37.0 35.0 37.0 32.0 37.0 8 35.133887917805616 37.0 35.0 37.0 32.0 37.0 9 36.64309714992987 39.0 35.0 39.0 32.0 39.0 10 36.435042612341185 38.0 35.0 39.0 32.0 39.0 11 36.554962451087476 38.0 35.0 39.0 32.0 39.0 12 36.380604934223925 38.0 35.0 39.0 32.0 39.0 13 36.43817185005267 38.0 35.0 39.0 32.0 39.0 14 37.24421731226999 39.0 36.0 40.0 32.0 41.0 15 37.29333548027882 39.0 36.0 40.0 32.0 41.0 16 37.12337208828602 39.0 36.0 40.0 31.0 41.0 17 37.228731174618446 39.0 36.0 40.0 32.0 41.0 18 37.22152403382603 39.0 36.0 40.0 32.0 41.0 19 37.29207932316897 39.0 36.0 40.0 31.0 41.0 20 37.17761673531072 39.0 36.0 40.0 31.0 41.0 21 37.12490857698255 39.0 36.0 40.0 31.0 41.0 22 36.99574555591985 39.0 36.0 40.0 31.0 41.0 23 36.797362943074255 39.0 35.0 40.0 30.0 41.0 24 36.62534507945315 39.0 35.0 40.0 30.0 41.0 25 36.79262446625448 39.0 35.0 40.0 30.0 41.0 26 36.61594087622536 39.0 35.0 40.0 30.0 41.0 27 36.49072286749143 38.0 35.0 40.0 30.0 41.0 28 36.26608996606921 38.0 35.0 40.0 30.0 41.0 29 36.13700648545671 38.0 35.0 40.0 30.0 41.0 30 35.84745596660077 38.0 35.0 40.0 29.0 41.0 31 35.6315860947773 38.0 34.0 40.0 27.0 41.0 32 35.43276406944463 38.0 34.0 40.0 27.0 41.0 33 35.25710868523516 38.0 34.0 40.0 27.0 41.0 34 35.02532587334444 38.0 33.0 40.0 25.0 41.0 35 34.85078114542128 38.0 33.0 40.0 25.0 41.0 36 34.61950952642392 37.0 33.0 40.0 24.0 41.0 37 34.47798863541568 37.0 33.0 40.0 24.0 41.0 38 34.23679386025325 37.0 33.0 40.0 23.0 41.0 39 34.08212745484139 37.0 33.0 40.0 22.0 41.0 40 33.84494753240303 37.0 33.0 40.0 20.0 41.0 41 33.64676280067745 37.0 33.0 40.0 18.0 41.0 42 33.260408643912925 37.0 32.0 40.0 16.0 41.0 43 32.87438816903704 37.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 3.0 15 10.0 16 17.0 17 26.0 18 126.0 19 238.0 20 573.0 21 1173.0 22 2099.0 23 3553.0 24 5713.0 25 8726.0 26 12228.0 27 16697.0 28 22325.0 29 27978.0 30 34867.0 31 41585.0 32 50076.0 33 60045.0 34 72810.0 35 87505.0 36 112301.0 37 150554.0 38 183773.0 39 135920.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.12757512207519 22.814335129136833 15.753665165744838 21.30442458304314 2 19.730396674045174 24.778111244109642 34.07959089048444 21.411901191360744 3 21.170078822646136 24.712926875166115 33.451900337755916 20.66509396443184 4 14.59470260601675 17.216336444464275 34.72677855356661 33.46218239595236 5 12.079090367651482 39.818046370142454 34.28785106923705 13.81501219296901 6 32.14035591441448 37.018610525335575 12.40064718766308 18.44038637258687 7 24.67994668849826 34.37941958751487 20.98597178060028 19.9546619433866 8 27.475696512442262 34.937560746593824 18.359099912505506 19.227642828458407 9 23.806068742349083 14.755335515199016 22.60112792238404 38.837467820067864 10 16.914082733708273 28.52107142926429 32.85292194753822 21.711923889489213 11 32.01755321935122 22.473669200967677 23.58752650540002 21.92125107428108 12 20.80244674184856 28.730883616801272 30.919507004409645 19.547162636940524 13 32.956712534992946 20.824465866476803 26.81861479335973 19.400206805170516 14 19.37556866571865 24.288646473739043 29.172527116503478 27.163257744038834 15 22.301784228098732 30.053971105476457 26.831127864183713 20.8131168022411 16 20.410661524344228 28.62573502166022 28.368974568396055 22.594628885599494 17 21.19927598790209 27.142402625998862 27.902304927045883 23.756016459053157 18 22.642450156267884 25.284842112206356 30.958598225665956 21.114109505859805 19 21.913879032555325 24.518731776021852 33.21483099594344 20.352558195479386 20 23.139674970560336 23.74263038328797 32.72216520745507 20.39552943869662 21 21.512781762344773 25.27688806718646 33.85678062937836 19.353549541090402 22 19.715070587299525 25.57613476092275 32.87309806173503 21.8356965900427 23 21.077928301074184 25.67148630061246 34.1352692056237 19.11531619268965 24 21.168526813861767 25.87101642995299 31.256583912264947 21.703872843920298 25 20.820973846711972 26.18035118078768 32.22649240194699 20.772182570553348 26 20.60863964490039 27.381993982085937 32.390714331443114 19.618652041570556 27 19.47800124548705 26.82356182135991 32.036565326959746 21.66187160619329 28 19.854654377343774 26.80454971375138 32.27848469622338 21.062311212681465 29 20.71194522961 25.907876638581772 31.25920292708857 22.12097520471966 30 20.267779715633193 26.57737442793926 33.68654466584281 19.46830119058474 31 21.51569177881547 26.369599251931763 32.869509041421175 19.245199927831592 32 20.876458160753188 25.981015052545196 31.63915407761208 21.503372709089533 33 20.30590093139927 26.349035135538866 32.436401590033 20.908662343028862 34 19.561615718744967 27.13173256560632 33.00948083366152 20.297170881987192 35 18.793371370481957 29.488360904122718 31.752159717224 19.966108008171325 36 21.742867064627585 26.655847872098953 31.538079505530003 20.06320555774346 37 20.524443168348334 27.663586575900016 31.305278187874542 20.506692067877104 38 20.44228370332576 25.674105315436087 33.03140295774074 20.85220802349741 39 19.741842738829902 25.395034735896605 33.64687144129236 21.216251083981135 40 18.414584226546722 26.441961661503004 32.95283251303202 22.190621598918252 41 20.73571036412066 25.086960992199213 32.85486195851868 21.322466685161437 42 18.745744100911608 27.858460678887443 32.12386582108055 21.2719293991204 43 19.694700472004673 27.709467835587947 30.74015298926592 21.85567870314146 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 283.0 1 272.0 2 261.0 3 455.0 4 649.0 5 649.0 6 1247.0 7 1845.0 8 2177.5 9 2510.0 10 3997.5 11 5485.0 12 5485.0 13 11166.5 14 16848.0 15 26905.0 16 36962.0 17 33145.0 18 29328.0 19 29328.0 20 31868.5 21 34409.0 22 26360.5 23 18312.0 24 19140.0 25 19968.0 26 19968.0 27 21461.5 28 22955.0 29 24108.0 30 25261.0 31 27263.0 32 29265.0 33 29265.0 34 32183.5 35 35102.0 36 38796.5 37 42491.0 38 44278.0 39 46065.0 40 46065.0 41 47519.5 42 48974.0 43 52033.5 44 55093.0 45 61273.5 46 67454.0 47 67454.0 48 96322.0 49 125190.0 50 112992.0 51 100794.0 52 89891.5 53 78989.0 54 78989.0 55 70001.5 56 61014.0 57 48117.5 58 35221.0 59 30664.0 60 26107.0 61 26107.0 62 22853.0 63 19599.0 64 17153.5 65 14708.0 66 12460.0 67 10212.0 68 10212.0 69 8809.5 70 7407.0 71 6180.5 72 4954.0 73 4045.5 74 3137.0 75 3137.0 76 2520.5 77 1904.0 78 1448.0 79 992.0 80 761.0 81 530.0 82 530.0 83 425.5 84 321.0 85 245.5 86 170.0 87 130.0 88 90.0 89 90.0 90 62.5 91 35.0 92 25.5 93 16.0 94 12.0 95 8.0 96 8.0 97 5.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1030922.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.676259475811804 #Duplication Level Percentage of deduplicated Percentage of total 1 84.38354075480605 43.60625747533097 2 8.827084522642767 9.1230142041402 3 2.5187563914963036 3.904797265299672 4 1.1404461714268632 2.357359690914029 5 0.6538878961543629 1.689524029488277 6 0.43644591470546085 1.3532335401286448 7 0.3151461033987397 1.1399900268417 8 0.2358664495621467 0.9750956679369576 9 0.1778768399651939 0.827280876310093 >10 1.1329320644022545 10.94274789207514 >50 0.09913199959408824 3.582476416660881 >100 0.06337275492786673 6.1324082563743305 >500 0.009458620072017568 3.4223825508621353 >1k 0.005296827240329839 5.6020753080552295 >5k 1.8917240144035138E-4 0.6642603168644694 >10k+ 5.675172043210541E-4 4.6770964827172445 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18270 1.7722000306521732 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17422 1.6899435650805785 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12152 1.178750671728802 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6795 0.6591187306120153 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4625 0.44862753923187204 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4333 0.42030337891712466 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4319 0.4189453712308011 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3687 0.3576410242481972 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3321 0.32213882330573995 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3303 0.320392813423324 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2257 0.21893023914515355 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2067 0.20050013483076315 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1979 0.19196408651672967 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1969 0.19099408102649862 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1828 0.17731700361424046 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1825 0.17702600196717114 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1810 0.17557099373182453 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 1776 0.17227297506503889 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1536 0.14899284329949306 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1486 0.1441428158483377 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1471 0.1426878076129911 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1467 0.14229980541689866 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1461 0.14171780212276003 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1446 0.14026279388741342 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1391 0.13492776369114248 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1283 0.12445170439664688 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 1253 0.12154168792595367 No Hit GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG 1206 0.1169826621218676 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1153 0.11184163302364293 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 1033 0.10020156714087002 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 9.700054902310747E-5 0.0 8 0.0 0.0 0.0 1.9400109804621493E-4 0.0 9 0.0 0.0 0.0 4.8500274511553736E-4 0.0 10 9.700054902310747E-5 0.0 0.0 7.760043921848597E-4 0.0 11 9.700054902310747E-5 0.0 0.0 9.700054902310747E-4 0.0 12 9.700054902310747E-5 0.0 0.0 0.0017460098824159346 0.0 13 9.700054902310747E-5 0.0 0.0 0.002037011529485257 0.0 14 9.700054902310747E-5 0.0 0.0 0.0025220142746007943 0.0 15 9.700054902310747E-5 0.0 0.0 0.003686020862878084 0.0 16 9.700054902310747E-5 0.0 0.0 0.005238029647247803 0.0 17 9.700054902310747E-5 0.0 0.0 0.00688703898064063 0.0 18 9.700054902310747E-5 0.0 0.0 0.00805104556891792 0.0 19 9.700054902310747E-5 0.0 0.0 0.010185057647426285 0.0 20 9.700054902310747E-5 0.0 0.0 0.0168780955300207 0.0 21 9.700054902310747E-5 0.0 0.0 0.02686915207940077 0.0 22 9.700054902310747E-5 0.0 0.0 0.04365024706039836 0.0 23 9.700054902310747E-5 0.0 0.0 0.05441730800196329 0.0 24 9.700054902310747E-5 0.0 0.0 0.06857938815933698 0.0 25 9.700054902310747E-5 0.0 0.0 0.07692143537532423 0.0 26 9.700054902310747E-5 0.0 0.0 0.09244152321902142 0.0 27 9.700054902310747E-5 0.0 0.0 0.1518058592211632 0.0 28 9.700054902310747E-5 0.0 0.0 0.2728625444020013 0.0 29 9.700054902310747E-5 0.0 0.0 0.4367934722510529 0.0 30 9.700054902310747E-5 0.0 0.0 0.6921959178288949 0.0 31 9.700054902310747E-5 0.0 0.0 0.993770624741736 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGCGTC 25 0.0054960833 29.6 24 GTATTGG 335 0.0 22.64179 1 AGGTCGC 140 0.0 21.142857 35 GGTATCA 6465 0.0 21.061098 1 AGCATCG 45 0.0038255448 20.555555 19 TCGTGTC 110 1.7535058E-9 20.181818 34 ATTGGAC 385 0.0 19.220781 3 GTCGCCC 160 1.8189894E-12 18.5 37 TATGACC 50 0.007034401 18.5 4 CTGCGCA 60 9.2359364E-4 18.5 9 CGTGTCT 120 5.171387E-9 18.5 35 GGACAAT 50 0.007034401 18.5 1 TTGGACC 615 0.0 17.146341 4 GCGACTA 65 0.0015797844 17.076923 13 CCGAGGT 185 1.8189894E-12 17.000002 32 GCTCGGA 185 1.8189894E-12 17.000002 11 GTACTGC 220 0.0 16.818182 6 TATTGGA 445 0.0 16.629215 2 GGTCGCC 190 1.8189894E-12 16.552631 36 TGGACCC 630 0.0 16.444445 5 >>END_MODULE