##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088663_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2235974 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.570439548939298 31.0 31.0 34.0 30.0 34.0 2 31.7762778100282 31.0 31.0 34.0 30.0 34.0 3 31.848696809533564 31.0 31.0 34.0 30.0 34.0 4 35.567085753233265 37.0 35.0 37.0 33.0 37.0 5 35.4376987388941 37.0 35.0 37.0 33.0 37.0 6 35.49080445479241 37.0 35.0 37.0 33.0 37.0 7 35.35939416111279 37.0 35.0 37.0 33.0 37.0 8 35.38783501060388 37.0 35.0 37.0 33.0 37.0 9 36.989604530285234 39.0 37.0 39.0 33.0 39.0 10 36.807822005085924 39.0 37.0 39.0 32.0 39.0 11 36.89204793973454 39.0 37.0 39.0 33.0 39.0 12 36.76339259758834 39.0 37.0 39.0 32.0 39.0 13 36.801607711002006 39.0 37.0 39.0 32.0 39.0 14 37.810292069585785 40.0 37.0 41.0 32.0 41.0 15 37.82727482519922 40.0 37.0 41.0 32.0 41.0 16 37.70154751352207 40.0 37.0 41.0 32.0 41.0 17 37.7245938459034 39.0 37.0 41.0 32.0 41.0 18 37.687624274700866 39.0 37.0 41.0 32.0 41.0 19 37.73176521730575 40.0 37.0 41.0 32.0 41.0 20 37.61481573578226 39.0 37.0 41.0 32.0 41.0 21 37.55460796950233 39.0 36.0 41.0 32.0 41.0 22 37.41833625972395 39.0 36.0 41.0 32.0 41.0 23 37.25990418493238 39.0 36.0 41.0 31.0 41.0 24 37.10337687289745 39.0 36.0 41.0 31.0 41.0 25 37.287961309031324 39.0 36.0 41.0 31.0 41.0 26 37.161707157596645 39.0 36.0 41.0 31.0 41.0 27 37.03528708294461 39.0 36.0 41.0 31.0 41.0 28 36.86962594377216 39.0 35.0 41.0 30.0 41.0 29 36.76733182049523 39.0 35.0 41.0 30.0 41.0 30 36.577084975048905 39.0 35.0 40.0 30.0 41.0 31 36.44284593649121 39.0 35.0 40.0 30.0 41.0 32 36.26666633869625 38.0 35.0 40.0 30.0 41.0 33 36.13511874467235 38.0 35.0 40.0 30.0 41.0 34 35.95762875596944 38.0 35.0 40.0 29.0 41.0 35 35.82833700212972 38.0 35.0 40.0 28.0 41.0 36 35.63418850129742 38.0 35.0 40.0 27.0 41.0 37 35.569520486374174 38.0 35.0 40.0 26.0 41.0 38 35.36961207956801 38.0 34.0 40.0 25.0 41.0 39 35.28487048597166 38.0 34.0 40.0 25.0 41.0 40 35.13121440589202 38.0 34.0 40.0 24.0 41.0 41 35.00544997392635 38.0 34.0 40.0 24.0 41.0 42 34.754752067778966 38.0 33.0 40.0 23.0 41.0 43 34.404078043841295 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 3.0 14 1.0 15 18.0 16 18.0 17 70.0 18 189.0 19 383.0 20 809.0 21 1724.0 22 3191.0 23 5400.0 24 8687.0 25 13459.0 26 19382.0 27 27062.0 28 36421.0 29 47541.0 30 60094.0 31 74667.0 32 92432.0 33 113183.0 34 139200.0 35 170620.0 36 219395.0 37 301542.0 38 415098.0 39 485382.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.76796062923809 21.695824727836726 14.117695465152993 23.418519177772193 2 19.056930000080502 23.214223421202572 34.9619449957826 22.766901582934327 3 20.00720938615565 24.65851570724883 32.015309659235754 23.318965247359763 4 14.385542944595958 17.0324878554044 35.53739891429865 33.044570285701 5 13.232935624475061 38.13273320709454 34.680769991064295 13.953561177366106 6 32.426495120247374 36.833388939227376 14.127042622141403 16.613073318383844 7 25.89690220011503 32.79966582795685 22.110588047982667 19.19284392394545 8 26.161976838728897 35.1530921200336 19.347228545591317 19.33770249564619 9 24.505920015170123 14.985728814377985 21.93992416727565 38.56842700317624 10 16.73762753949733 27.883553207684887 33.62789549431254 21.75092375850524 11 32.78311822946063 22.883226728038878 23.14396321245238 21.189691830048112 12 20.570543306854194 27.518119620353364 31.0013891038089 20.909947968983538 13 30.809302791535142 21.31809224973099 26.20866790043176 21.66393705830211 14 20.351667774312222 23.54414675662597 27.960834964986176 28.14335050407563 15 23.1449918469535 29.520736824310124 25.44949091536843 21.884780413367956 16 21.753741322573518 28.31808419954794 27.143383599272617 22.784790878605925 17 21.49009782761338 27.522994453423877 27.52862958156043 23.458278137402313 18 22.35240660222346 26.280717038749106 29.366575818860145 22.000300540167284 19 22.599413052209012 25.767115360017602 30.553530586670508 21.079941001102874 20 23.086359680389844 25.394168268504018 30.32946715838377 21.190004892722367 21 22.044800163150377 26.150885475412505 30.83555533293321 20.968759028503907 22 21.1965344856425 26.501605117054133 30.297892551523407 22.00396784577996 23 21.812552382093887 26.567035215972997 30.92607516903148 20.694337232901635 24 21.886927128848548 26.80907738640968 29.19662750997999 22.107367974761782 25 21.875925212010515 26.821152660988005 29.941224719070973 21.361697407930507 26 21.526502544305075 27.366239500101518 30.015241679912197 21.092016275681203 27 21.03052182181009 27.208634805234766 29.814657952194434 21.946185420760706 28 21.192509394116392 27.099912610790643 29.95110855492953 21.756469440163436 29 21.424936068129593 26.955054039089898 29.617294297697562 22.002715595082947 30 21.453066985573177 27.117488843787985 30.63680525802178 20.79263891261705 31 21.95718733759874 26.929561792757877 30.26511041720521 20.848140452438177 32 21.53334519989946 26.784569051339595 29.824497064813816 21.857588683947128 33 21.152974050682165 26.831886238390968 30.205941571771405 21.809198139155463 34 20.79769263864428 26.854560920654713 30.712119192799204 21.63562724790181 35 20.582842197628416 28.101578998682452 29.9045516629442 21.411027140744928 36 22.02029182808029 26.624370408600456 29.81421071980265 21.541127043516607 37 21.200201791255175 26.86659147199386 29.985724342054066 21.947482394696895 38 21.15623884714223 26.046590881647102 30.912300411364352 21.88486985984631 39 20.6560988634036 25.91765378309408 31.404613828246664 22.02163352525566 40 19.974963930707602 26.346773263016477 31.153627009974176 22.524635796301745 41 20.88289040928025 25.560807057684933 31.24329710452805 22.31300542850677 42 19.848978565940392 27.04065431887848 30.642216769962445 22.46815034521868 43 20.263562993129618 26.815830595525707 30.085144102748956 22.835462308595716 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 943.0 1 839.0 2 735.0 3 1364.0 4 1993.0 5 1993.0 6 3028.0 7 4063.0 8 4487.5 9 4912.0 10 7454.0 11 9996.0 12 9996.0 13 18515.0 14 27034.0 15 38659.5 16 50285.0 17 46543.5 18 42802.0 19 42802.0 20 47718.5 21 52635.0 22 43424.5 23 34214.0 24 38586.0 25 42958.0 26 42958.0 27 48005.5 28 53053.0 29 57171.0 30 61289.0 31 68029.5 32 74770.0 33 74770.0 34 83218.5 35 91667.0 36 99351.0 37 107035.0 38 112283.5 39 117532.0 40 117532.0 41 121058.0 42 124584.0 43 131067.0 44 137550.0 45 143850.0 46 150150.0 47 150150.0 48 180713.5 49 211277.0 50 197552.5 51 183828.0 52 167912.5 53 151997.0 54 151997.0 55 139266.0 56 126535.0 57 110737.0 58 94939.0 59 86014.0 60 77089.0 61 77089.0 62 68968.5 63 60848.0 64 53112.0 65 45376.0 66 38861.0 67 32346.0 68 32346.0 69 27646.5 70 22947.0 71 19254.0 72 15561.0 73 12789.5 74 10018.0 75 10018.0 76 7995.0 77 5972.0 78 4705.5 79 3439.0 80 2613.5 81 1788.0 82 1788.0 83 1342.5 84 897.0 85 692.5 86 488.0 87 361.5 88 235.0 89 235.0 90 170.0 91 105.0 92 82.5 93 60.0 94 41.5 95 23.0 96 23.0 97 13.5 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2235974.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.98238722325047 #Duplication Level Percentage of deduplicated Percentage of total 1 80.97132767123912 44.51996892000765 2 11.21204169710064 12.329296363064355 3 3.4265078448964688 5.651927434548093 4 1.4004505443378634 3.0800045646318526 5 0.7284436552533609 2.0025785561730127 6 0.4308869608427624 1.4214716238303797 7 0.29557794670400833 1.1376106784233153 8 0.22907185929766485 1.0075934135883324 9 0.16150103711346905 0.7991741303576373 >10 0.9784333632303372 10.234371205916654 >50 0.09559820660772628 3.6697383601289686 >100 0.06299145372196693 6.550648663644976 >500 0.0041540425271707065 1.576805204804571 >1k 0.002687909870522201 2.8863833751273487 >5k 8.145181425824852E-5 0.4370485385466137 >10k+ 2.4435544277474555E-4 2.695378967206321 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23032 1.0300656447704668 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 21879 0.9784997499970929 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 15275 0.6831474784590518 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9759 0.43645409114775036 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4471 0.19995760236925833 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4351 0.19459081366777967 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4244 0.1898054270756279 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3489 0.15603938149549146 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3346 0.14964395829289606 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3053 0.1365400492134524 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2805 0.1254486858970632 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2690 0.1203055133914795 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2531 0.11319451836202031 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 4.4723239178988666E-5 0.0 4.4723239178988666E-5 0.0 6 0.0 4.4723239178988666E-5 0.0 4.4723239178988666E-5 0.0 7 0.0 4.4723239178988666E-5 0.0 1.34169717536966E-4 0.0 8 0.0 4.4723239178988666E-5 0.0 1.34169717536966E-4 4.4723239178988666E-5 9 0.0 4.4723239178988666E-5 0.0 2.68339435073932E-4 4.4723239178988666E-5 10 4.4723239178988666E-5 4.4723239178988666E-5 0.0 4.02509152610898E-4 4.4723239178988666E-5 11 4.4723239178988666E-5 4.4723239178988666E-5 0.0 6.261253485058413E-4 4.4723239178988666E-5 12 4.4723239178988666E-5 4.4723239178988666E-5 0.0 8.05018305221796E-4 4.4723239178988666E-5 13 4.4723239178988666E-5 4.4723239178988666E-5 0.0 8.944647835797733E-4 4.4723239178988666E-5 14 8.944647835797733E-5 4.4723239178988666E-5 0.0 0.0011180809794747166 4.4723239178988666E-5 15 8.944647835797733E-5 4.4723239178988666E-5 0.0 0.001475866892906626 4.4723239178988666E-5 16 8.944647835797733E-5 4.4723239178988666E-5 0.0 0.0022361619589494333 4.4723239178988666E-5 17 8.944647835797733E-5 4.4723239178988666E-5 0.0 0.0029964570249922406 4.4723239178988666E-5 18 8.944647835797733E-5 4.4723239178988666E-5 0.0 0.0033989661776031386 4.4723239178988666E-5 19 1.7889295671595466E-4 4.4723239178988666E-5 0.0 0.004382877439540889 4.4723239178988666E-5 20 1.7889295671595466E-4 4.4723239178988666E-5 0.0 0.006976825311922232 4.4723239178988666E-5 21 1.7889295671595466E-4 4.4723239178988666E-5 0.0 0.011270256273105144 4.4723239178988666E-5 22 1.7889295671595466E-4 4.4723239178988666E-5 0.0 0.018515421020101307 4.4723239178988666E-5 23 1.7889295671595466E-4 4.4723239178988666E-5 0.0 0.022853575220463208 4.4723239178988666E-5 24 1.7889295671595466E-4 4.4723239178988666E-5 0.0 0.03376604558013644 4.4723239178988666E-5 25 2.2361619589494333E-4 4.4723239178988666E-5 0.0 0.04123482652302755 4.4723239178988666E-5 26 2.68339435073932E-4 4.4723239178988666E-5 0.0 0.05594877221291482 4.4723239178988666E-5 27 2.68339435073932E-4 4.4723239178988666E-5 0.0 0.11726433312730827 4.4723239178988666E-5 28 3.1306267425292066E-4 4.4723239178988666E-5 0.0 0.244636118309068 4.4723239178988666E-5 29 3.1306267425292066E-4 4.4723239178988666E-5 0.0 0.402330259654182 4.4723239178988666E-5 30 3.1306267425292066E-4 4.4723239178988666E-5 0.0 0.6340413618405223 4.4723239178988666E-5 31 3.1306267425292066E-4 4.4723239178988666E-5 0.0 0.9574351043437893 4.4723239178988666E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8215 0.0 20.785759 1 CGAACTA 230 0.0 15.282609 24 TAATACT 665 0.0 14.744361 4 GTATCAA 11660 0.0 14.596912 2 ATACTGG 480 0.0 14.260417 6 TACTGGT 475 0.0 14.021052 7 AATACTG 590 0.0 13.79661 5 CTAATAC 515 0.0 13.650485 3 CTAGCAC 205 1.4260877E-9 13.536586 3 GTACCGT 110 2.4579882E-4 13.454545 6 TCTATAC 235 5.638867E-11 13.3829775 3 TAGCACT 240 8.185452E-11 13.104167 4 GGACCCT 855 0.0 12.982456 6 GCGATAT 100 0.0018334228 12.949999 15 TCTAACC 130 7.003581E-5 12.8076935 3 GTATTGG 535 0.0 12.794394 1 TACCCCG 290 0.0 12.75862 5 GTATTAG 455 0.0 12.604395 1 TCTAATA 470 0.0 12.595744 2 TAGGGGT 295 1.8189894E-12 12.542373 4 >>END_MODULE