##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088662_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1113499 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.322945956844148 31.0 31.0 34.0 30.0 34.0 2 31.539885532003172 31.0 31.0 34.0 30.0 34.0 3 31.596613917030908 31.0 31.0 34.0 30.0 34.0 4 35.35561774191086 37.0 35.0 37.0 33.0 37.0 5 35.22988884588132 37.0 35.0 37.0 33.0 37.0 6 35.29629573084484 37.0 35.0 37.0 32.0 37.0 7 35.1512017523141 37.0 35.0 37.0 32.0 37.0 8 35.18786635641343 37.0 35.0 37.0 32.0 37.0 9 36.740023116320714 39.0 35.0 39.0 32.0 39.0 10 36.51541581986154 38.0 35.0 39.0 32.0 39.0 11 36.62751560621069 38.0 35.0 39.0 32.0 39.0 12 36.47235156924254 38.0 35.0 39.0 32.0 39.0 13 36.5221585291051 38.0 35.0 39.0 32.0 39.0 14 37.43361152547061 39.0 36.0 41.0 32.0 41.0 15 37.44928015202528 39.0 36.0 41.0 32.0 41.0 16 37.31076812821565 39.0 36.0 41.0 32.0 41.0 17 37.35858227084174 39.0 36.0 40.0 32.0 41.0 18 37.314298441219975 39.0 36.0 40.0 32.0 41.0 19 37.37900438168332 39.0 36.0 41.0 32.0 41.0 20 37.245487422979274 39.0 36.0 40.0 31.0 41.0 21 37.1813849855276 39.0 36.0 40.0 31.0 41.0 22 37.03847062278457 39.0 36.0 40.0 31.0 41.0 23 36.85952748947238 39.0 36.0 40.0 30.0 41.0 24 36.6996719350444 39.0 35.0 40.0 30.0 41.0 25 36.88236361236068 39.0 36.0 40.0 30.0 41.0 26 36.744974175998365 39.0 35.0 40.0 30.0 41.0 27 36.624900426493426 39.0 35.0 40.0 30.0 41.0 28 36.43869460143206 39.0 35.0 40.0 30.0 41.0 29 36.32735188805738 38.0 35.0 40.0 30.0 41.0 30 36.11852008847785 38.0 35.0 40.0 29.0 41.0 31 35.9573066522736 38.0 35.0 40.0 29.0 41.0 32 35.77850900629457 38.0 35.0 40.0 28.0 41.0 33 35.6391626754941 38.0 34.0 40.0 27.0 41.0 34 35.448354241898734 38.0 34.0 40.0 27.0 41.0 35 35.302600181948975 38.0 34.0 40.0 26.0 41.0 36 35.106035119923774 38.0 34.0 40.0 25.0 41.0 37 35.02715224710575 38.0 34.0 40.0 25.0 41.0 38 34.82462579670031 38.0 33.0 40.0 24.0 41.0 39 34.734823291264746 38.0 33.0 40.0 24.0 41.0 40 34.561088963708094 38.0 33.0 40.0 23.0 41.0 41 34.42153607681731 38.0 33.0 40.0 23.0 41.0 42 34.14420668541238 38.0 33.0 40.0 21.0 41.0 43 33.77495354733143 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 2.0 15 11.0 16 19.0 17 47.0 18 108.0 19 256.0 20 572.0 21 1075.0 22 2003.0 23 3300.0 24 5340.0 25 8110.0 26 11610.0 27 15889.0 28 21527.0 29 27558.0 30 34285.0 31 42549.0 32 51080.0 33 61930.0 34 75390.0 35 91449.0 36 117238.0 37 156885.0 38 208810.0 39 176454.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.169950758824214 22.508417160679983 14.489370893013822 22.832261187481983 2 19.551252403459724 24.03621377298049 34.08534718037466 22.327186643185133 3 20.318922603432963 25.111832161501717 32.435592667797636 22.133652567267685 4 14.327538686608609 17.233693070222785 36.12737865054212 32.31138959262649 5 12.484250098114142 39.2021905722412 34.8812167770245 13.432342552620163 6 32.02140280323557 37.75782465902529 13.67518066922377 16.545591868515373 7 25.635496753926134 33.28319109401984 21.859471809134988 19.221840342919034 8 26.895937939773635 34.77192166315371 19.138230029842866 19.193910367229787 9 24.551077279817942 14.443569325163292 21.893778081524996 39.111575313493766 10 16.214204054067405 28.13024528984759 33.80981931730518 21.845731338779828 11 32.94758235076996 22.676715470781744 23.559338625360237 20.816363553088056 12 20.61339974261315 27.718749635159078 31.11075986597204 20.55709075625573 13 31.287679647669194 21.221033876096882 26.4257085098415 21.065577966392425 14 20.190049564480976 23.305903283253958 28.18080662847475 28.32324052379032 15 22.55709255239565 29.73392881358672 25.80738734385931 21.901591290158322 16 21.41079605819134 28.506806023175596 27.1764051876113 22.905992731021758 17 21.408191655313566 27.305996682529575 27.424182688983105 23.86162897317375 18 22.46962053850071 25.988258633371018 29.839092805651372 21.703028022476893 19 22.4034327826069 25.165626551977144 31.079686645430304 21.35125401998565 20 23.199571800244094 24.966344828329436 30.898456127935454 20.935627243491016 21 22.00702470321033 25.817715148374624 31.4268804911365 20.748379657278544 22 20.85578882423783 26.14515145500804 30.988442737712386 22.010616983041746 23 21.787536405510917 26.295757786940086 31.661186943140496 20.2555188644085 24 21.789332545426625 26.416009354296683 29.485971698223345 22.308686402053347 25 21.719283088714043 26.689292042471525 30.456336287684138 21.135088581130294 26 21.461806431797427 27.37865054211993 30.34964557669113 20.809897449391514 27 20.492788947273414 27.271331182156427 30.118033334560696 22.117846536009463 28 20.868541417639353 27.008106877509547 30.38646644496313 21.736885259887977 29 21.38493164340516 26.656781909997225 29.775419645639555 22.182866800958063 30 21.4815639708702 26.938237034788536 31.120009986537934 20.46018900780333 31 22.082013544691105 26.77245332056877 30.76850540503404 20.377027729706086 32 21.454621872134595 26.65103426226696 30.052653841628956 21.841690023969488 33 21.115331042057512 26.647262368443975 30.61125335541388 21.626153234084626 34 20.4787790559309 27.200024427502857 31.092259624840256 21.22893689172599 35 20.110660180206718 28.93051542929091 30.045110053982988 20.913714336519387 36 22.157092193167664 26.81421357360896 29.87492579696973 21.153768436253646 37 21.190768918517215 27.514528526743177 29.920008908853983 21.37469364588563 38 21.204509388872374 26.1270104418594 30.980809143070626 21.6876710261976 39 20.570382191631964 26.105636376862485 31.72970968092472 21.594271750580827 40 19.653362957667678 26.62499023348921 31.312735799493307 22.408911009349804 41 21.04941270715106 25.599573955611994 31.31507078138373 22.035942555853218 42 19.88290963889505 27.434420686502637 30.638464875136844 22.04420479946547 43 20.31021132484178 27.0586682161367 30.0560665074688 22.575053951552718 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 436.0 1 383.0 2 330.0 3 495.0 4 660.0 5 660.0 6 1160.5 7 1661.0 8 1934.0 9 2207.0 10 3397.5 11 4588.0 12 4588.0 13 8848.0 14 13108.0 15 20207.0 16 27306.0 17 25178.0 18 23050.0 19 23050.0 20 25163.5 21 27277.0 22 22244.5 23 17212.0 24 19080.0 25 20948.0 26 20948.0 27 23473.5 28 25999.0 29 28284.5 30 30570.0 31 34009.5 32 37449.0 33 37449.0 34 41542.0 35 45635.0 36 49707.5 37 53780.0 38 56318.0 39 58856.0 40 58856.0 41 60146.5 42 61437.0 43 64563.5 44 67690.0 45 71157.0 46 74624.0 47 74624.0 48 94017.0 49 113410.0 50 105379.5 51 97349.0 52 87908.0 53 78467.0 54 78467.0 55 69893.0 56 61319.0 57 52908.5 58 44498.0 59 39932.0 60 35366.0 61 35366.0 62 31239.5 63 27113.0 64 23553.5 65 19994.0 66 17145.0 67 14296.0 68 14296.0 69 12188.5 70 10081.0 71 8450.0 72 6819.0 73 5551.0 74 4283.0 75 4283.0 76 3429.0 77 2575.0 78 1991.0 79 1407.0 80 1118.0 81 829.0 82 829.0 83 623.0 84 417.0 85 320.0 86 223.0 87 172.5 88 122.0 89 122.0 90 91.5 91 61.0 92 45.5 93 30.0 94 19.5 95 9.0 96 9.0 97 7.0 98 5.0 99 4.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1113499.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.40325068293987 #Duplication Level Percentage of deduplicated Percentage of total 1 85.18617015014037 49.75149249998217 2 8.753442236890674 10.224589625995199 3 2.36163163547795 4.137808932827399 4 1.01116033981616 2.3622020322771937 5 0.5671243398214313 1.6560952493493912 6 0.37804702062566015 1.324750494932338 7 0.2711881218531797 1.1086787503978826 8 0.19525673627080023 0.9122902492764978 9 0.14234359411067116 0.7481995748960553 >10 0.9931145797968407 10.808033188591468 >50 0.08070733511558581 3.2279699823960617 >100 0.05162234247363044 5.5179214663523535 >500 0.004945852140130682 1.8670790236889403 >1k 0.002627483949444425 2.7342724186115688 >5k 3.091157587581676E-4 1.3018281608799989 >10k+ 3.091157587581676E-4 2.316788349545559 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13194 1.1849135023920094 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12472 1.1200728514349811 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9181 0.8245180283053689 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5241 0.47067846491105964 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3314 0.2976203840326754 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2968 0.26654716349094165 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2690 0.2415808186626122 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2599 0.23340838204614464 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2326 0.20889107219674197 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2275 0.20431091541168872 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1481 0.13300416075811475 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1394 0.12519095212478862 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1391 0.12492153113743254 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1386 0.12447249615850575 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1366 0.1226763562427986 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1267 0.1137854636600482 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1247 0.11198932374434102 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1227 0.11019318382863388 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1190 0.10687032498457566 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 8.980699578535768E-5 0.0 5 0.0 0.0 0.0 8.980699578535768E-5 0.0 6 8.980699578535768E-5 0.0 0.0 8.980699578535768E-5 0.0 7 8.980699578535768E-5 0.0 0.0 8.980699578535768E-5 0.0 8 1.7961399157071536E-4 0.0 0.0 8.980699578535768E-5 0.0 9 2.694209873560731E-4 0.0 0.0 1.7961399157071536E-4 0.0 10 2.694209873560731E-4 0.0 0.0 1.7961399157071536E-4 0.0 11 2.694209873560731E-4 0.0 0.0 5.388419747121461E-4 0.0 12 2.694209873560731E-4 0.0 0.0 7.184559662828615E-4 0.0 13 2.694209873560731E-4 0.0 0.0 7.184559662828615E-4 0.0 14 2.694209873560731E-4 0.0 0.0 7.184559662828615E-4 0.0 15 2.694209873560731E-4 0.0 0.0 0.00116749094520965 0.0 16 2.694209873560731E-4 0.0 0.0 0.0017961399157071537 0.0 17 2.694209873560731E-4 0.0 0.0 0.0024247888862046576 0.0 18 2.694209873560731E-4 0.0 0.0 0.0030534378567021615 0.0 19 2.694209873560731E-4 0.0 0.0 0.004310735797697169 0.0 20 2.694209873560731E-4 0.0 0.0 0.007364173654399331 0.0 21 2.694209873560731E-4 0.0 0.0 0.012752593401520792 0.0 22 2.694209873560731E-4 0.0 0.0 0.02137406499691513 0.0 23 2.694209873560731E-4 0.0 0.0 0.025594993798826942 0.0 24 2.694209873560731E-4 0.0 0.0 0.032689746465870195 0.0 25 2.694209873560731E-4 0.0 0.0 0.03807816621299166 0.0 26 2.694209873560731E-4 0.0 0.0 0.0490346196988053 0.0 27 2.694209873560731E-4 0.0 0.0 0.0952852225282645 0.0 28 2.694209873560731E-4 0.0 0.0 0.20179631952969873 0.0 29 2.694209873560731E-4 0.0 0.0 0.3317470424311113 0.0 30 2.694209873560731E-4 0.0 0.0 0.510193543056617 0.0 31 2.694209873560731E-4 0.0 0.0 0.7283347358192509 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGACTA 40 5.9399656E-5 27.75 9 GGTATCA 3565 0.0 23.92286 1 TAACCCG 45 0.0038257341 20.555555 5 AATCGAT 45 0.0038257341 20.555555 22 GTATTGG 295 0.0 20.067797 1 CGTATAC 70 1.21915364E-4 18.5 3 CAAGTCG 60 9.23657E-4 18.5 18 CTAATAC 295 0.0 18.186441 3 ATCTCGT 85 2.7229928E-5 17.411764 7 ATAGACC 75 2.0671939E-4 17.266666 3 GTATACT 140 1.8681021E-9 17.178572 4 CCGTATA 65 0.0015798924 17.076923 2 CGAATGC 65 0.0015798924 17.076923 23 CTCGTAT 90 4.4457556E-5 16.444445 9 TCTCGTA 90 4.4457556E-5 16.444445 8 ATTGGAC 420 0.0 16.29762 3 GGACCGT 125 1.6574631E-7 16.279999 6 TTGGACC 530 0.0 16.056604 4 TGGACCC 530 0.0 16.056604 5 TAATACT 350 0.0 15.857143 4 >>END_MODULE