##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088659_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4143193 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.566170342535333 31.0 31.0 34.0 30.0 34.0 2 31.77413627605569 31.0 31.0 34.0 30.0 34.0 3 31.85683650266835 31.0 31.0 34.0 30.0 34.0 4 35.56636294761069 37.0 35.0 37.0 33.0 37.0 5 35.44277155324408 37.0 35.0 37.0 33.0 37.0 6 35.488351616736175 37.0 35.0 37.0 33.0 37.0 7 35.34988522137395 37.0 35.0 37.0 33.0 37.0 8 35.375493490165674 37.0 35.0 37.0 33.0 37.0 9 36.9746118512944 39.0 37.0 39.0 33.0 39.0 10 36.79144152830921 39.0 37.0 39.0 32.0 39.0 11 36.879189069879196 39.0 37.0 39.0 33.0 39.0 12 36.74218024600833 39.0 35.0 39.0 32.0 39.0 13 36.77449783295154 39.0 37.0 39.0 32.0 39.0 14 37.78018113083315 40.0 37.0 41.0 32.0 41.0 15 37.79161627276354 40.0 37.0 41.0 32.0 41.0 16 37.67820205334388 39.0 37.0 41.0 32.0 41.0 17 37.70004752373351 39.0 37.0 41.0 32.0 41.0 18 37.65599816373507 39.0 37.0 41.0 32.0 41.0 19 37.70250239368526 40.0 37.0 41.0 32.0 41.0 20 37.574238033323574 39.0 37.0 41.0 32.0 41.0 21 37.507961613180946 39.0 36.0 41.0 32.0 41.0 22 37.377544323906704 39.0 36.0 41.0 31.0 41.0 23 37.203678419035754 39.0 36.0 41.0 31.0 41.0 24 37.046539468472744 39.0 36.0 41.0 31.0 41.0 25 37.234059094036894 39.0 36.0 41.0 31.0 41.0 26 37.11078557045255 39.0 36.0 41.0 31.0 41.0 27 37.00222147507973 39.0 36.0 41.0 31.0 41.0 28 36.831952795826794 39.0 35.0 41.0 30.0 41.0 29 36.72787075089188 39.0 35.0 41.0 30.0 41.0 30 36.54186782995627 39.0 35.0 40.0 30.0 41.0 31 36.4054945062902 39.0 35.0 40.0 30.0 41.0 32 36.234926058235764 38.0 35.0 40.0 30.0 41.0 33 36.105840109307 38.0 35.0 40.0 30.0 41.0 34 35.92181247651268 38.0 35.0 40.0 29.0 41.0 35 35.78880805214722 38.0 35.0 40.0 28.0 41.0 36 35.60459698594779 38.0 35.0 40.0 27.0 41.0 37 35.54379339799039 38.0 34.0 40.0 26.0 41.0 38 35.359490856448154 38.0 34.0 40.0 25.0 41.0 39 35.28348474232313 38.0 34.0 40.0 25.0 41.0 40 35.12986529954072 38.0 34.0 40.0 24.0 41.0 41 35.01210757017595 38.0 34.0 40.0 24.0 41.0 42 34.7633832167606 38.0 33.0 40.0 23.0 41.0 43 34.429432082937 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 6.0 14 6.0 15 29.0 16 54.0 17 95.0 18 327.0 19 663.0 20 1578.0 21 3126.0 22 5810.0 23 9945.0 24 16595.0 25 25432.0 26 36709.0 27 51498.0 28 69275.0 29 89790.0 30 112914.0 31 140164.0 32 172144.0 33 210402.0 34 257778.0 35 315461.0 36 404692.0 37 558171.0 38 764052.0 39 896474.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.52200971569512 21.243929500749783 13.507987680033251 23.72607310352185 2 18.948960379108577 23.119391252109185 34.88082741981848 23.050820948963757 3 19.88734292609589 24.686371115224418 32.09283275000706 23.333453208672637 4 13.891170408909264 16.4685787024645 36.35642848402186 33.28382240460437 5 12.919262993541455 38.29872274837305 35.05434093946384 13.727673318621653 6 32.49061774336846 37.0531616557568 13.988559065435762 16.46766153543897 7 26.241234719212937 32.62698599847992 22.012467196193853 19.119312086113293 8 26.562725897634987 34.74407298911733 19.365571432467664 19.327629680780017 9 24.63192035707726 14.515857697191514 21.861086365032957 38.99113558069827 10 16.258885357259487 27.561713876230243 34.09083284317192 22.088567923338353 11 32.97608873156525 22.477688101905947 23.661726595888727 20.884496570640085 12 20.707024751200343 26.985829528095845 31.358326778404965 20.94881894229885 13 30.966696458504344 20.985143583704648 26.461427213262816 21.586732744528195 14 20.429123142465244 22.910204762365645 27.812341833943048 28.848330261226064 15 22.873421537447086 29.362667874752635 25.54136387081171 22.222546716988564 16 21.909141089975776 28.409393431587667 26.804447680810426 22.87701779762613 17 21.540560625585147 27.062461246676172 27.23674711750092 24.160231010237755 18 22.667396860344184 26.137377621559025 29.368919092110847 21.826306425985948 19 22.542300105256984 25.306351888507244 30.450138335337023 21.70120967089875 20 23.509259645881812 24.94938082778186 30.18580114419 21.35555838214633 21 22.324810840334976 25.88194660494937 30.694877115306962 21.09836543940869 22 21.321285298560795 26.07631360643832 30.21266448364824 22.389736611352646 23 22.103870131080065 26.16518226401715 30.986777589168547 20.74417001573424 24 22.157041682586353 26.360587112403405 28.859867256968236 22.622503948042006 25 22.116638061514394 26.53482471127944 29.78864368616186 21.55989354104431 26 21.89321134690081 27.0513104265237 29.792022722571698 21.263455504003794 27 21.04985213095311 27.058116771292095 29.512890179144442 22.379140918610357 28 21.323650624047687 26.697163274797965 29.81531393782525 22.163872163329103 29 21.732151990023155 26.62625178214001 29.301700403529356 22.339895824307483 30 21.738282527509583 26.823490964577317 30.458030798951434 20.980195708961663 31 22.32703134997573 26.570594225275045 30.24119320533704 20.861181219412178 32 21.846049653009164 26.39172251932266 29.52698558816835 22.235242239499826 33 21.49634352056494 26.46200647664736 30.06524195228173 21.976408050505974 34 21.013237857855042 26.717365085333945 30.61812471685485 21.651272339956165 35 20.73721885511971 28.315045907830022 29.526285644912026 21.421449592138238 36 22.394418990377712 26.532604201638687 29.451536532331463 21.621440275652134 37 21.57676458711916 26.84422376654913 29.594904220006164 21.98410742632554 38 21.443920184263682 25.84038445710832 30.591430329217108 22.124265029410893 39 20.96861044127078 25.58476035270382 31.248894270674814 22.197734935350585 40 20.164906631190004 26.08386816641175 30.94405691455841 22.807168287839836 41 21.386259341527175 25.122001316376043 30.93642994666191 22.555309395434875 42 20.0167117486441 26.922617411257455 30.446735162952827 22.613935677145623 43 20.496776278585138 26.64346073185584 29.814300226902297 23.045462762656722 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1174.0 1 1153.5 2 1133.0 3 2153.5 4 3174.0 5 3174.0 6 4975.0 7 6776.0 8 7306.0 9 7836.0 10 11935.0 11 16034.0 12 16034.0 13 29886.5 14 43739.0 15 65185.0 16 86631.0 17 80946.0 18 75261.0 19 75261.0 20 82798.0 21 90335.0 22 75031.0 23 59727.0 24 67206.0 25 74685.0 26 74685.0 27 83887.5 28 93090.0 29 102235.0 30 111380.0 31 123973.5 32 136567.0 33 136567.0 34 152101.5 35 167636.0 36 181762.0 37 195888.0 38 206901.0 39 217914.0 40 217914.0 41 224022.0 42 230130.0 43 241467.5 44 252805.0 45 265563.0 46 278321.0 47 278321.0 48 344405.5 49 410490.0 50 384911.5 51 359333.0 52 328203.5 53 297074.0 54 297074.0 55 270317.5 56 243561.0 57 210718.5 58 177876.0 59 159943.0 60 142010.0 61 142010.0 62 126149.0 63 110288.0 64 96449.5 65 82611.0 66 70457.0 67 58303.0 68 58303.0 69 49562.0 70 40821.0 71 34487.0 72 28153.0 73 23122.5 74 18092.0 75 18092.0 76 14609.5 77 11127.0 78 8626.5 79 6126.0 80 4792.0 81 3458.0 82 3458.0 83 2623.5 84 1789.0 85 1353.5 86 918.0 87 689.0 88 460.0 89 460.0 90 377.0 91 294.0 92 198.0 93 102.0 94 75.0 95 48.0 96 48.0 97 32.5 98 17.0 99 11.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4143193.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.797445950896666 #Duplication Level Percentage of deduplicated Percentage of total 1 77.23791454258944 37.69012960251983 2 12.733339268916627 12.427088694987782 3 4.297365774105773 6.291014222794791 4 1.9058446626657357 3.720014076689446 5 0.9793512694172865 2.3894920318166037 6 0.6159091886185302 1.8032877205364006 7 0.37855785366906175 1.2930859482592445 8 0.2728554136725918 1.065171784087828 9 0.2054704902579403 0.9023791628579476 >10 1.1710376980588753 10.830459931959826 >50 0.11791821421904061 4.02373191366308 >100 0.0732547944886261 7.0042084782319325 >500 0.006728286710564042 2.2463825471597807 >1k 0.003957815653364992 4.009188420392266 >5k 2.4736347833531185E-4 1.004186170581478 >10k+ 2.4736347833531185E-4 3.3001792934616123 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39606 0.9559294003441308 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 39359 0.9499678146781962 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 29280 0.7067013291439719 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16837 0.4063774002321398 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 11620 0.2804600220168358 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 8924 0.21538943515303297 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 8831 0.213144789537924 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8594 0.20742456361554965 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7864 0.18980530233566237 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 7383 0.1781958986704216 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 4988 0.12039024008777771 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4981 0.12022128826728565 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4872 0.11759046706248057 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4735 0.11428383857570719 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4622 0.11155647347347807 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4611 0.11129097775556196 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4496 0.10851534070462081 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4328 0.10446049701281113 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4147 0.10009188565437332 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.4135974356009967E-5 0.0 0.0 4.827194871201993E-5 0.0 3 2.4135974356009967E-5 0.0 0.0 7.24079230680299E-5 0.0 4 2.4135974356009967E-5 0.0 0.0 7.24079230680299E-5 0.0 5 4.827194871201993E-5 0.0 0.0 7.24079230680299E-5 0.0 6 9.654389742403987E-5 0.0 0.0 7.24079230680299E-5 0.0 7 9.654389742403987E-5 0.0 0.0 7.24079230680299E-5 0.0 8 1.2067987178004983E-4 0.0 0.0 7.24079230680299E-5 0.0 9 1.2067987178004983E-4 0.0 0.0 1.6895182049206977E-4 0.0 10 1.2067987178004983E-4 0.0 0.0 2.896316922721196E-4 0.0 11 1.2067987178004983E-4 0.0 0.0 4.585835127641894E-4 0.0 12 1.2067987178004983E-4 0.0 0.0 7.723511793923189E-4 0.0 13 1.2067987178004983E-4 0.0 0.0 8.930310511723687E-4 0.0 14 1.448158461360598E-4 0.0 0.0 0.0010378468973084286 0.0 15 1.448158461360598E-4 0.0 0.0 0.0012067987178004983 0.0 16 1.448158461360598E-4 0.0 0.0 0.0016412462562086776 0.0 17 1.448158461360598E-4 0.0 0.0 0.0026066852304490766 0.0 18 1.448158461360598E-4 0.0 0.0 0.0033549004354853852 0.0 19 1.9308779484807973E-4 0.0 0.0 0.004272067461013764 0.0 20 1.9308779484807973E-4 0.0 0.0 0.0068546167171068305 0.0 21 1.9308779484807973E-4 0.0 0.0 0.011416315870392714 0.0 22 1.9308779484807973E-4 0.0 0.0 0.018150252715719496 0.0 23 1.9308779484807973E-4 0.0 0.0 0.022615407971581337 0.0 24 2.172237692040897E-4 0.0 0.0 0.031521582508949014 0.0 25 2.172237692040897E-4 0.0 0.0 0.038110703508139734 0.0 26 2.172237692040897E-4 0.0 0.0 0.05032350653228078 0.0 27 2.172237692040897E-4 0.0 0.0 0.10528112014091548 0.0 28 2.172237692040897E-4 0.0 0.0 0.2143033163070125 0.0 29 2.172237692040897E-4 2.4135974356009967E-5 0.0 0.34840278982900386 0.0 30 2.4135974356009966E-4 2.4135974356009967E-5 0.0 0.5346359679599768 0.0 31 2.4135974356009966E-4 2.4135974356009967E-5 0.0 0.7805574106733623 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13115 0.0 22.005337 1 GTATTGG 1435 0.0 19.59582 1 TGGACCC 2120 0.0 17.103773 5 ACCGATC 120 1.0430995E-7 16.958334 8 TTGGACC 2135 0.0 16.637003 4 ATTGGAC 1725 0.0 16.194204 3 GGACCCT 2200 0.0 16.145454 6 CTAATAC 1085 0.0 15.5161295 3 GTATCAA 19350 0.0 14.933849 2 GACCCTC 2200 0.0 14.799999 7 TAATACT 1150 0.0 14.639131 4 GTATTAG 1065 0.0 14.41784 1 CGAACTA 570 0.0 13.956141 24 TTAACGG 515 0.0 13.291262 35 TATACTG 655 0.0 13.274809 5 TCTAATA 1050 0.0 12.861904 2 TATTGGA 2180 0.0 12.644495 2 CCCTCGC 2515 0.0 12.50497 9 GGGTAAG 555 0.0 12.333334 1 CGTACAC 120 5.1264383E-4 12.333334 3 >>END_MODULE