##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088655_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4113070 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.535210682045285 31.0 31.0 34.0 30.0 34.0 2 31.734399609051145 31.0 31.0 34.0 30.0 34.0 3 31.816176967569238 31.0 31.0 34.0 30.0 34.0 4 35.523888239198456 37.0 35.0 37.0 33.0 37.0 5 35.40741052303997 37.0 35.0 37.0 33.0 37.0 6 35.46132937197762 37.0 35.0 37.0 33.0 37.0 7 35.315133951039 37.0 35.0 37.0 32.0 37.0 8 35.3531814435446 37.0 35.0 37.0 32.0 37.0 9 36.93486373925073 39.0 37.0 39.0 33.0 39.0 10 36.76727237805338 39.0 37.0 39.0 32.0 39.0 11 36.84969134977037 39.0 37.0 39.0 32.0 39.0 12 36.713095327820824 39.0 35.0 39.0 32.0 39.0 13 36.756712382721425 39.0 37.0 39.0 32.0 39.0 14 37.726497725543204 40.0 37.0 41.0 32.0 41.0 15 37.73711242453933 40.0 37.0 41.0 32.0 41.0 16 37.62440342615127 39.0 36.0 41.0 32.0 41.0 17 37.671728173845814 39.0 37.0 41.0 32.0 41.0 18 37.63394933711315 39.0 37.0 41.0 32.0 41.0 19 37.686942600053 40.0 37.0 41.0 32.0 41.0 20 37.564117800086066 39.0 36.0 41.0 32.0 41.0 21 37.50985516901001 39.0 36.0 41.0 32.0 41.0 22 37.385103584427206 39.0 36.0 41.0 31.0 41.0 23 37.21488231418381 39.0 36.0 41.0 31.0 41.0 24 37.06035443111836 39.0 36.0 41.0 31.0 41.0 25 37.24001317750488 39.0 36.0 41.0 31.0 41.0 26 37.114725983267974 39.0 36.0 41.0 31.0 41.0 27 36.997203791814876 39.0 36.0 41.0 31.0 41.0 28 36.829689502002154 39.0 35.0 41.0 30.0 41.0 29 36.71586065882662 39.0 35.0 40.0 30.0 41.0 30 36.52175431004092 39.0 35.0 40.0 30.0 41.0 31 36.35544812026053 38.0 35.0 40.0 30.0 41.0 32 36.18643567943167 38.0 35.0 40.0 30.0 41.0 33 36.04180016386786 38.0 35.0 40.0 30.0 41.0 34 35.855455170955025 38.0 35.0 40.0 29.0 41.0 35 35.702361739527895 38.0 35.0 40.0 27.0 41.0 36 35.493282633166956 38.0 34.0 40.0 27.0 41.0 37 35.4136919624514 38.0 34.0 40.0 26.0 41.0 38 35.21572158995592 38.0 34.0 40.0 25.0 41.0 39 35.110839591837724 38.0 34.0 40.0 25.0 41.0 40 34.93532397941197 38.0 34.0 40.0 24.0 41.0 41 34.79173609979893 38.0 33.0 40.0 23.0 41.0 42 34.517823669424544 38.0 33.0 40.0 22.0 41.0 43 34.16523424108999 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 1.0 14 8.0 15 17.0 16 39.0 17 104.0 18 307.0 19 656.0 20 1569.0 21 3017.0 22 5848.0 23 10124.0 24 16536.0 25 25232.0 26 37368.0 27 52118.0 28 70645.0 29 91479.0 30 115922.0 31 142871.0 32 174130.0 33 212744.0 34 259829.0 35 317236.0 36 406293.0 37 562754.0 38 744435.0 39 861783.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.55900580345095 21.408923261699897 14.079288706489312 22.95278222835984 2 18.715266212342605 23.934530654717765 34.790460653477815 22.559742479461814 3 20.12900339648973 24.65727546577131 32.6742554831306 22.53946565460836 4 13.755175574449256 16.38578968993963 36.163571249699125 33.69546348591198 5 12.608611086123018 38.822290892204606 34.802422521376975 13.766675500295399 6 32.24148871767317 37.17850656565534 13.558631387260611 17.021373329410878 7 25.75448509264369 33.244924107783234 21.648087681464208 19.352503118108856 8 27.173619704989214 34.42083407284583 19.220679443821766 19.184866778343185 9 24.480935165217222 14.528101880104154 22.050779587996313 38.940183366682305 10 16.076434390856463 27.92354615895183 33.84277437534494 22.157245074846767 11 32.50545213186257 22.516927744969088 23.90717882263127 21.07044130053707 12 20.71192564191711 27.322462297019012 31.58839990566657 20.377212155397306 13 31.683292528451982 21.024903539205507 26.590527270384406 20.701276661958097 14 20.143907105884413 23.26267240771492 28.3715570121588 28.22186347424187 15 22.265898708264142 29.718458475056348 26.075875197844915 21.939767618834594 16 21.254610303252804 28.687598314640887 27.13736941019725 22.92042197190906 17 21.135964133846493 27.013957943822987 27.562696477327155 24.287381445003366 18 22.736714911246345 25.80228393876107 30.074664423411225 21.386336726581362 19 22.203001650835024 25.045258164825785 31.321494649981645 21.430245534357546 20 23.443778005236965 24.692115621664595 31.029766087131993 20.834340285966444 21 22.084574296085403 25.666302785996837 31.62508782977192 20.62403508814584 22 20.712338958490857 25.870359609731903 31.270681024149845 22.146620407627392 23 21.701721585093374 26.142808170053026 32.020996481946575 20.134473762907028 24 21.703423476867645 26.117377044397493 29.749992098359616 22.429207380375242 25 21.54872151458643 26.598331659806423 30.681826470252147 21.171120355355004 26 21.415123010306168 27.100851675269322 30.66595025127216 20.818075063152342 27 20.27222974566443 27.177898747164527 30.57640643120589 21.973465075965155 28 20.837500942118663 26.670807936650725 30.561332532633774 21.93035858859684 29 20.944744436637354 26.602124447189084 30.113418930385333 22.339712185788233 30 21.17270068343111 26.885124736510686 31.54954814773393 20.392626432324274 31 21.869236361160883 26.642726722375258 31.2256052048713 20.26243171159256 32 21.515267184852192 26.53560479155473 30.224746965162275 21.724381058430808 33 21.067864150136028 26.434366543725247 30.90465272898346 21.593116577155264 34 20.23746252799004 27.1042797715575 31.430537287233136 21.227720413219323 35 19.851984041117703 28.9711334842344 30.318642765622762 20.85823970902513 36 21.902423250759163 26.63120248378948 30.355987133698186 21.110387131753168 37 21.139076164519448 27.33145801068302 30.244561847962714 21.28490397683482 38 20.885372726454936 25.96996890400601 31.491999893023948 21.65265847651511 39 20.423041669604455 25.737125796546135 32.22318122472995 21.616651309119465 40 19.378347560338142 26.23184142258702 31.87570354990311 22.514107467171723 41 20.80810683990304 25.37301820781071 31.733133644698487 22.085741307587764 42 19.45186928498664 27.267855883804554 31.19531153128928 22.084963299919526 43 19.814980051397132 27.28660100606117 30.37169316350074 22.52672577904096 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1521.0 1 1339.0 2 1157.0 3 2355.5 4 3554.0 5 3554.0 6 5711.0 7 7868.0 8 8565.0 9 9262.0 10 14359.5 11 19457.0 12 19457.0 13 36377.0 14 53297.0 15 81526.0 16 109755.0 17 101826.0 18 93897.0 19 93897.0 20 99626.0 21 105355.0 22 86539.5 23 67724.0 24 74820.5 25 81917.0 26 81917.0 27 90385.5 28 98854.0 29 106232.0 30 113610.0 31 122904.5 32 132199.0 33 132199.0 34 143896.0 35 155593.0 36 166849.5 37 178106.0 38 187204.0 39 196302.0 40 196302.0 41 202995.0 42 209688.0 43 218826.0 44 227964.0 45 249136.0 46 270308.0 47 270308.0 48 353403.5 49 436499.0 50 402675.0 51 368851.0 52 336422.0 53 303993.0 54 303993.0 55 270367.5 56 236742.0 57 202944.5 58 169147.0 59 151180.5 60 133214.0 61 133214.0 62 116289.5 63 99365.0 64 86459.5 65 73554.0 66 63058.5 67 52563.0 68 52563.0 69 44982.0 70 37401.0 71 31490.0 72 25579.0 73 20894.5 74 16210.0 75 16210.0 76 13189.0 77 10168.0 78 7956.5 79 5745.0 80 4554.5 81 3364.0 82 3364.0 83 2510.0 84 1656.0 85 1259.0 86 862.0 87 625.5 88 389.0 89 389.0 90 310.0 91 231.0 92 158.5 93 86.0 94 63.5 95 41.0 96 41.0 97 30.0 98 19.0 99 11.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4113070.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.48761929552579 #Duplication Level Percentage of deduplicated Percentage of total 1 76.6852772770211 36.41601252903013 2 12.867814550393172 12.221237570689967 3 4.361249614068882 6.213160839769855 4 2.027470926484341 3.8511906995854135 5 1.0637983729860296 2.525862607178016 6 0.6108272328147949 1.7404038652349088 7 0.4041842405575711 1.3435623138594404 8 0.2923101454647219 1.1104890323238783 9 0.21116138337817325 0.9024796245401334 >10 1.279682298813136 11.465078556767146 >50 0.11614664578417741 3.8279231080846765 >100 0.07000986977632162 6.238200703097941 >500 0.005239179270487108 1.692935840944897 >1k 0.003955066653197142 3.990177977095425 >5k 4.1091601591658624E-4 1.2138568897904713 >10k+ 4.622805179061595E-4 5.247427842007714 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 52691 1.281062563972896 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 45961 1.117437826246575 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 38317 0.9315912444962036 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20675 0.502665891900697 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 14248 0.34640791428300516 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 11527 0.2802529497431359 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10850 0.26379322501197405 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 10621 0.25822560763614527 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10241 0.24898676657581806 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 9500 0.23097102650818002 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 6181 0.15027704366811165 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 6153 0.14959628695840332 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5915 0.1438098549258826 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5876 0.14286165808021745 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5694 0.13843673946711338 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 5295 0.1287359563537698 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5151 0.12523492184669846 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4930 0.1198618063879292 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4594 0.11169272587142937 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.431273963244E-5 0.0 5 2.431273963244E-5 0.0 0.0 2.431273963244E-5 0.0 6 7.293821889732E-5 0.0 0.0 2.431273963244E-5 0.0 7 7.293821889732E-5 0.0 0.0 2.431273963244E-5 0.0 8 1.4587643779464E-4 0.0 0.0 2.431273963244E-5 0.0 9 1.4587643779464E-4 0.0 0.0 1.7018917742708E-4 0.0 10 1.9450191705952E-4 0.0 2.431273963244E-5 2.1881465669196002E-4 0.0 11 2.1881465669196002E-4 0.0 2.431273963244E-5 5.3488027191368E-4 0.0 12 2.4312739632440002E-4 0.0 2.431273963244E-5 0.0010211350645624802 0.0 13 2.4312739632440002E-4 0.0 2.431273963244E-5 0.0013372006797842 0.0 14 2.6744013595684E-4 0.0 2.431273963244E-5 0.00153170259684372 0.0 15 2.9175287558928E-4 0.0 2.431273963244E-5 0.00213952108765472 0.0 16 3.1606561522172E-4 0.0 2.431273963244E-5 0.0029418414955252404 0.0 17 3.1606561522172E-4 0.0 2.431273963244E-5 0.00396297656008772 0.0 18 3.1606561522172E-4 0.0 2.431273963244E-5 0.004789609707590681 0.0 19 3.646910944866E-4 0.0 2.431273963244E-5 0.00622406134590464 0.0 20 3.8900383411904E-4 0.0 2.431273963244E-5 0.010600354479743841 0.0 21 4.3762931338392003E-4 0.0 2.431273963244E-5 0.018647871298081483 0.0 22 4.3762931338392003E-4 0.0 2.431273963244E-5 0.029637229611944364 0.0 23 4.3762931338392003E-4 0.0 2.431273963244E-5 0.036469109448660005 0.0 24 4.3762931338392003E-4 0.0 2.431273963244E-5 0.047847471596641926 0.0 25 4.3762931338392003E-4 0.0 2.431273963244E-5 0.05652711964542301 0.0 26 4.3762931338392003E-4 0.0 2.431273963244E-5 0.0700206901414272 0.0 27 4.3762931338392003E-4 0.0 2.431273963244E-5 0.12739875567398562 0.0 28 4.3762931338392003E-4 0.0 2.431273963244E-5 0.24728487480154726 0.0 29 4.3762931338392003E-4 0.0 2.431273963244E-5 0.3980238605226753 0.0 30 4.3762931338392003E-4 0.0 2.431273963244E-5 0.6261989219731247 0.0 31 4.3762931338392003E-4 0.0 2.431273963244E-5 0.8959001427157817 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 15340 0.0 22.202414 1 GTATTGG 1670 0.0 19.27545 1 ATTGGAC 1710 0.0 18.283627 3 TTGGACC 2155 0.0 17.426914 4 GGACCCT 2320 0.0 15.868534 6 TGGACCC 2370 0.0 15.6118145 5 TATTGGA 2085 0.0 15.172662 2 TAGGTCG 245 0.0 15.10204 21 CTCGCGT 100 1.0944532E-4 14.799999 21 CAATGCG 200 6.184564E-11 14.799999 19 GACCCTC 2480 0.0 14.5463705 7 GTATCAA 23570 0.0 14.442087 2 ATATCGT 120 3.3044267E-5 13.875001 26 ATACGAC 160 1.7867933E-7 13.875 19 TTAACGG 220 2.8558134E-10 13.454545 35 CGACGAG 255 1.6370905E-11 13.058824 24 ATAAACG 315 0.0 12.920635 3 TAAGCCG 245 1.1459633E-10 12.836734 10 ACCCTCG 2760 0.0 12.802536 8 TCTAACG 160 2.6996076E-6 12.71875 2 >>END_MODULE