##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088654_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4916087 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.561631028905712 31.0 31.0 34.0 30.0 34.0 2 31.764026552011792 31.0 31.0 34.0 30.0 34.0 3 31.840438543906973 31.0 31.0 34.0 30.0 34.0 4 35.55033383257864 37.0 35.0 37.0 33.0 37.0 5 35.43811551748372 37.0 35.0 37.0 33.0 37.0 6 35.487249513688425 37.0 35.0 37.0 33.0 37.0 7 35.34106332943254 37.0 35.0 37.0 32.0 37.0 8 35.37374745402187 37.0 35.0 37.0 33.0 37.0 9 36.96463894963616 39.0 37.0 39.0 33.0 39.0 10 36.78584105610824 39.0 37.0 39.0 32.0 39.0 11 36.87383298953009 39.0 37.0 39.0 33.0 39.0 12 36.7323816685913 39.0 35.0 39.0 32.0 39.0 13 36.76529402347843 39.0 37.0 39.0 32.0 39.0 14 37.743778944514204 40.0 37.0 41.0 32.0 41.0 15 37.760187116297985 40.0 37.0 41.0 32.0 41.0 16 37.65199252983114 39.0 36.0 41.0 32.0 41.0 17 37.68354567362213 39.0 37.0 41.0 32.0 41.0 18 37.6463020284222 39.0 37.0 41.0 32.0 41.0 19 37.694173028264146 40.0 37.0 41.0 32.0 41.0 20 37.57467554988347 39.0 37.0 41.0 32.0 41.0 21 37.509888453967555 39.0 36.0 41.0 32.0 41.0 22 37.37966516865954 39.0 36.0 41.0 31.0 41.0 23 37.198127291075195 39.0 36.0 41.0 31.0 41.0 24 37.038827628559055 39.0 36.0 41.0 31.0 41.0 25 37.22276965399514 39.0 36.0 41.0 31.0 41.0 26 37.09870533210661 39.0 36.0 41.0 31.0 41.0 27 36.99042612549371 39.0 36.0 41.0 31.0 41.0 28 36.81965270346111 39.0 35.0 41.0 30.0 41.0 29 36.7025662890018 39.0 35.0 41.0 30.0 41.0 30 36.49747736360239 39.0 35.0 40.0 30.0 41.0 31 36.340413829128735 38.0 35.0 40.0 30.0 41.0 32 36.16492405443598 38.0 35.0 40.0 30.0 41.0 33 36.021277288217235 38.0 35.0 40.0 29.0 41.0 34 35.83362621532125 38.0 35.0 40.0 28.0 41.0 35 35.69232562401764 38.0 35.0 40.0 27.0 41.0 36 35.49301243041468 38.0 34.0 40.0 27.0 41.0 37 35.41496356756908 38.0 34.0 40.0 26.0 41.0 38 35.22623033318979 38.0 34.0 40.0 25.0 41.0 39 35.1257117703572 38.0 34.0 40.0 25.0 41.0 40 34.95141461084802 38.0 34.0 40.0 24.0 41.0 41 34.81332897485338 38.0 33.0 40.0 23.0 41.0 42 34.53883139171459 38.0 33.0 40.0 22.0 41.0 43 34.18384682777176 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 5.0 13 8.0 14 13.0 15 30.0 16 73.0 17 147.0 18 375.0 19 869.0 20 1959.0 21 3902.0 22 7059.0 23 12121.0 24 20018.0 25 30674.0 26 44170.0 27 61740.0 28 83929.0 29 109259.0 30 137583.0 31 167671.0 32 206626.0 33 252726.0 34 309681.0 35 379500.0 36 487352.0 37 674281.0 38 898871.0 39 1025443.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.410577152113056 21.348686465475488 14.000789652420718 23.23994672999074 2 18.904588140934038 23.503042155275118 34.85164115281117 22.74072855097967 3 19.96183143219394 24.362933365499835 32.59948410188835 23.075751100417875 4 13.777624358559967 16.31346231260757 36.08215232968823 33.82676099914424 5 12.718997853374034 38.62264846004556 34.789620281333505 13.868733405246896 6 32.549464645357176 37.0754830010128 13.57673287718464 16.798319476445393 7 26.161843759070987 33.11056130617705 21.38052072715556 19.347074207596407 8 27.155988085646165 34.310458704249946 18.990205014679358 19.54334819542453 9 24.59543535336132 14.458674144700856 21.810679916771207 39.13521058516662 10 16.263544562982712 27.84832733838925 33.633700949556015 22.254427149072015 11 33.12935674246611 22.40354981512736 23.56886686504938 20.898226577357153 12 21.06150684477309 27.18405919179217 31.022905005546075 20.731528957888663 13 31.586625704549164 20.922921014213134 26.317760446468906 21.172692834768792 14 20.4203465072933 22.98761189539567 27.9883777484003 28.603663848910728 15 22.681555472879143 29.565038210267637 25.63243897026232 22.1209673465909 16 21.685987249615398 28.41170223391083 26.824749033123297 23.07756148335048 17 21.586639943516055 26.896777864183445 27.241930421491727 24.274651770808774 18 22.904415646020908 25.70361346330933 29.664487223273305 21.727483667396445 19 22.58645951546423 24.906475414287826 30.95557503355819 21.55149003668975 20 23.622100259820463 24.584491690240633 30.57297399334064 21.22043405659827 21 22.316264948118288 25.50917019979508 31.224447411121893 20.950117440964735 22 21.165085158175597 25.787989512797477 30.781717247884345 22.265208081142585 23 22.180526910935466 25.965325674667678 31.362443341625156 20.4917040727717 24 22.01354451212926 25.963983143504173 29.30249200227742 22.719980342089148 25 21.9538628994971 26.327910795720257 30.28996435579761 21.428261948985035 26 21.70061270274509 26.905626365033818 30.22745529116958 21.166305641051512 27 20.664585472144818 26.963823056833615 30.07159962791545 22.299991843106113 28 21.281173421056216 26.478396334320365 30.02802838924535 22.212401855378065 29 21.376208354327332 26.468469740262933 29.64003688299251 22.51528502241722 30 21.55378861277272 26.703473718020042 31.029088785450703 20.713648883756534 31 22.262177215334063 26.492350521868307 30.596264874889318 20.649207387908312 32 21.785944797152695 26.38612782890132 29.794651721989464 22.033275651956526 33 21.432045445900368 26.30848477661197 30.399990887061197 21.85947889042647 34 20.732403637283067 26.788215912370955 31.011615538943882 21.467764911402096 35 20.37602263751638 28.611841084179346 29.86519563221725 21.14694064608702 36 22.30161915360733 26.45600047354736 29.826831787151043 21.41554858569427 37 21.42020676200401 27.0757209951736 29.885760768676388 21.618311474146 38 21.317198007276925 25.787826781747352 30.972641452439714 21.922333758536006 39 20.820054649154905 25.544686251484155 31.744291750735897 21.890967348625033 40 19.769117186087225 26.127568531639085 31.39590491380645 22.70740936846724 41 21.122388598899896 25.192861721120885 31.34791959540179 22.33683008457743 42 19.810125410717912 27.017768399948984 30.867151049198277 22.304955140134826 43 20.19522844083109 26.85196580125616 30.13622419619506 22.816581561717683 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1548.0 1 1501.0 2 1454.0 3 2607.5 4 3761.0 5 3761.0 6 6131.5 7 8502.0 8 9393.5 9 10285.0 10 15754.0 11 21223.0 12 21223.0 13 39940.5 14 58658.0 15 91060.0 16 123462.0 17 113933.5 18 104405.0 19 104405.0 20 111048.5 21 117692.0 22 95616.0 23 73540.0 24 82183.5 25 90827.0 26 90827.0 27 100031.0 28 109235.0 29 117943.0 30 126651.0 31 139461.0 32 152271.0 33 152271.0 34 166702.0 35 181133.0 36 197941.0 37 214749.0 38 227487.5 39 240226.0 40 240226.0 41 248100.0 42 255974.0 43 270556.0 44 285138.0 45 305418.0 46 325698.0 47 325698.0 48 417557.0 49 509416.0 50 475737.5 51 442059.0 52 404164.5 53 366270.0 54 366270.0 55 329273.0 56 292276.0 57 250577.0 58 208878.0 59 186352.0 60 163826.0 61 163826.0 62 145134.0 63 126442.0 64 110531.0 65 94620.0 66 82061.5 67 69503.0 68 69503.0 69 59484.0 70 49465.0 71 41998.5 72 34532.0 73 28569.0 74 22606.0 75 22606.0 76 18031.0 77 13456.0 78 10480.5 79 7505.0 80 5916.5 81 4328.0 82 4328.0 83 3267.5 84 2207.0 85 1667.5 86 1128.0 87 854.0 88 580.0 89 580.0 90 459.0 91 338.0 92 229.5 93 121.0 94 91.5 95 62.0 96 62.0 97 44.0 98 26.0 99 18.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4916087.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.22830032171379 #Duplication Level Percentage of deduplicated Percentage of total 1 74.85164889318204 32.3570955792995 2 13.122447510072256 11.345222038426575 3 4.757972805648839 6.170372320954056 4 2.3019560435374142 3.9803858870967765 5 1.226504385130815 2.6509849953166893 6 0.7652908687257487 1.9849334104045147 7 0.5043188275940823 1.5260592015992114 8 0.3717779098693059 1.285706171264752 9 0.26757857603630664 1.0410270340098593 >10 1.5765924928131971 12.956675535772682 >50 0.14783068352369833 4.455368754820858 >100 0.09295884975380368 7.691411577210309 >500 0.007788329307516921 2.2968460372070822 >1k 0.004436987005961625 3.9420905301558546 >5k 4.248179048260999E-4 1.1351088852386526 >10k+ 4.720198942512221E-4 5.180712041222518 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 60547 1.231609611465379 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 53208 1.0823242143599168 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 43681 0.8885318750461495 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23174 0.47139116944024795 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 15165 0.3084770468870872 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 12797 0.2603086560510422 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 12790 0.26016626638218565 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 11572 0.2353904640011456 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10579 0.21519147240478048 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 10386 0.21126558582059266 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 7074 0.14389493107017837 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6931 0.14098611354925167 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 6851 0.1393588030480339 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6509 0.13240205065532812 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6343 0.1290253813653013 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5567 0.11324046950348926 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5512 0.11212169353390206 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 5505 0.11197930386504552 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5338 0.1085822931937535 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 2.034138126522171E-5 4 0.0 0.0 0.0 0.0 2.034138126522171E-5 5 0.0 0.0 0.0 2.034138126522171E-5 2.034138126522171E-5 6 0.0 0.0 0.0 2.034138126522171E-5 4.068276253044342E-5 7 0.0 0.0 0.0 2.034138126522171E-5 4.068276253044342E-5 8 0.0 0.0 0.0 2.034138126522171E-5 4.068276253044342E-5 9 0.0 0.0 0.0 1.8307243138699538E-4 4.068276253044342E-5 10 0.0 0.0 0.0 3.2546210024354734E-4 4.068276253044342E-5 11 2.034138126522171E-5 0.0 0.0 5.492172941609862E-4 4.068276253044342E-5 12 2.034138126522171E-5 0.0 0.0 6.916069630175381E-4 4.068276253044342E-5 13 2.034138126522171E-5 0.0 0.0 7.933138693436467E-4 4.068276253044342E-5 14 6.102414379566513E-5 0.0 0.0 9.967276819958638E-4 4.068276253044342E-5 15 6.102414379566513E-5 0.0 0.0 0.001403555307300298 4.068276253044342E-5 16 6.102414379566513E-5 0.0 0.0 0.002034138126522171 4.068276253044342E-5 17 6.102414379566513E-5 0.0 0.0 0.0028274519958658177 4.068276253044342E-5 18 6.102414379566513E-5 0.0 0.0 0.0033156451462311386 4.068276253044342E-5 19 6.102414379566513E-5 0.0 0.0 0.004108959015574785 4.068276253044342E-5 20 6.102414379566513E-5 0.0 0.0 0.00701777653650149 4.068276253044342E-5 21 6.102414379566513E-5 0.0 0.0 0.01224551152166347 4.068276253044342E-5 22 6.102414379566513E-5 0.0 0.0 0.020137967452569492 4.068276253044342E-5 23 6.102414379566513E-5 0.0 0.0 0.024450340280796495 4.068276253044342E-5 24 6.102414379566513E-5 0.0 0.0 0.031590165104889316 4.068276253044342E-5 25 6.102414379566513E-5 0.0 0.0 0.03708233804649918 4.068276253044342E-5 26 6.102414379566513E-5 0.0 0.0 0.046805518291275154 4.068276253044342E-5 27 6.102414379566513E-5 0.0 0.0 0.09957106129326027 4.068276253044342E-5 28 6.102414379566513E-5 0.0 0.0 0.21126558582059268 4.068276253044342E-5 29 6.102414379566513E-5 0.0 0.0 0.3589440138061023 4.068276253044342E-5 30 6.102414379566513E-5 0.0 0.0 0.5677279511123379 4.068276253044342E-5 31 6.102414379566513E-5 0.0 0.0 0.8219952169276094 4.068276253044342E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 16655 0.0 23.01531 1 GTATTGG 1645 0.0 19.905775 1 ATTGGAC 1835 0.0 18.046322 3 TTGGACC 2530 0.0 16.74506 4 TGGACCC 2530 0.0 15.794467 5 GGACCCT 2655 0.0 15.1902075 6 ACCGTTA 275 0.0 14.8 8 GTATCAA 25905 0.0 14.797144 2 TATTGGA 2215 0.0 14.532731 2 GTATTAG 1050 0.0 14.271429 1 ACGTTTA 225 2.7284841E-11 13.9777775 26 GACCCTC 2870 0.0 13.923345 7 TCTATAC 420 0.0 13.214287 3 TAATACT 1210 0.0 12.995869 4 ACGTTCG 430 0.0 12.906977 22 CTAGACT 360 0.0 12.847222 4 GGACCGT 485 0.0 12.587629 6 TTAACGG 530 0.0 12.566038 35 TATACTG 690 0.0 12.333334 5 ATTAGAG 810 0.0 12.333333 3 >>END_MODULE