##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088653_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4480468 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50659886422579 31.0 31.0 34.0 30.0 34.0 2 31.712803662474546 31.0 31.0 34.0 30.0 34.0 3 31.793416223483796 31.0 31.0 34.0 30.0 34.0 4 35.51271675191074 37.0 35.0 37.0 33.0 37.0 5 35.39587784133265 37.0 35.0 37.0 33.0 37.0 6 35.44078966750795 37.0 35.0 37.0 33.0 37.0 7 35.30023760910691 37.0 35.0 37.0 32.0 37.0 8 35.33074826111915 37.0 35.0 37.0 32.0 37.0 9 36.914372561080675 39.0 37.0 39.0 33.0 39.0 10 36.72449105763059 39.0 35.0 39.0 32.0 39.0 11 36.816206699835824 39.0 37.0 39.0 32.0 39.0 12 36.67490717487548 39.0 35.0 39.0 32.0 39.0 13 36.71272108181556 39.0 35.0 39.0 32.0 39.0 14 37.69245757362847 39.0 37.0 41.0 32.0 41.0 15 37.70474914674092 39.0 37.0 41.0 32.0 41.0 16 37.59107686964844 39.0 36.0 41.0 32.0 41.0 17 37.617194007411726 39.0 36.0 41.0 32.0 41.0 18 37.5747031336905 39.0 36.0 41.0 32.0 41.0 19 37.62902491436162 39.0 37.0 41.0 32.0 41.0 20 37.502279449378946 39.0 36.0 41.0 32.0 41.0 21 37.44011808587853 39.0 36.0 41.0 32.0 41.0 22 37.31159669034574 39.0 36.0 41.0 31.0 41.0 23 37.130077706168194 39.0 36.0 41.0 31.0 41.0 24 36.97144360812308 39.0 36.0 40.0 31.0 41.0 25 37.15931840155984 39.0 36.0 41.0 31.0 41.0 26 37.029921874232784 39.0 36.0 41.0 31.0 41.0 27 36.918076415231624 39.0 36.0 41.0 31.0 41.0 28 36.75004887882248 39.0 35.0 41.0 30.0 41.0 29 36.63945128053587 39.0 35.0 40.0 30.0 41.0 30 36.439648715268135 39.0 35.0 40.0 30.0 41.0 31 36.29061406085257 38.0 35.0 40.0 30.0 41.0 32 36.11688868216445 38.0 35.0 40.0 30.0 41.0 33 35.984789981760834 38.0 35.0 40.0 29.0 41.0 34 35.800379335373 38.0 35.0 40.0 28.0 41.0 35 35.65867360284685 38.0 35.0 40.0 27.0 41.0 36 35.467462997169044 38.0 34.0 40.0 26.0 41.0 37 35.39978993265882 38.0 34.0 40.0 26.0 41.0 38 35.20413180051727 38.0 34.0 40.0 25.0 41.0 39 35.113228127061724 38.0 34.0 40.0 25.0 41.0 40 34.94973783988637 38.0 34.0 40.0 24.0 41.0 41 34.81988020001482 38.0 33.0 40.0 24.0 41.0 42 34.55882041786706 38.0 33.0 40.0 23.0 41.0 43 34.21229590301727 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 1.0 13 5.0 14 8.0 15 19.0 16 57.0 17 164.0 18 360.0 19 780.0 20 1707.0 21 3583.0 22 6500.0 23 11467.0 24 18653.0 25 28643.0 26 41404.0 27 57510.0 28 78183.0 29 101235.0 30 127003.0 31 155918.0 32 191264.0 33 233466.0 34 285465.0 35 349001.0 36 446345.0 37 612178.0 38 825370.0 39 904178.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.416633262418124 21.432515531859618 13.792197600786347 23.358653604935913 2 19.005001263260894 23.554414404923772 34.55781851360171 22.88276581821363 3 20.099306590293693 24.631355474472755 32.22922248300847 23.04011545222508 4 13.871586628896804 16.42707859982484 36.18657693794488 33.51475783333348 5 12.78627589796423 38.656162704431765 34.85600164982765 13.701559747776349 6 32.59442986759419 37.19412793484966 13.738564810640316 16.472877386915833 7 26.215587300255237 32.84402432960128 21.689676167757472 19.250712202386 8 27.060253527086903 34.424685099860106 19.168890392700046 19.346170980352944 9 24.658607091937718 14.316205360689999 21.780470254446634 39.24471729292565 10 16.203285013976217 27.778615983865972 33.89607960596973 22.12201939618808 11 33.1453990967015 22.390785962537844 23.53546549155133 20.928349449209325 12 20.814097991549097 27.087817611910186 31.28780297058254 20.810281425958184 13 31.261689627065742 20.965622341237566 26.344301532786307 21.42838649891038 14 20.413782667346357 22.836364415503024 28.011136336650544 28.738716580500075 15 22.7058423361131 29.514818541277382 25.595294955794795 22.18404416681472 16 21.802700075081443 28.363711112321305 26.720088169360878 23.113500643236375 17 21.53511642087389 26.914442866236293 27.344822014128884 24.205618698760933 18 22.692584792481497 25.907048103010666 29.550350543737842 21.85001656076999 19 22.52005817249448 24.989643938981374 30.77278980677911 21.71750808174503 20 23.48928727981095 24.820777650906113 30.461304488727514 21.228630580555425 21 22.313093185801126 25.695217553166323 30.936478064345064 21.05521119668749 22 21.24813747135344 25.949789173809524 30.524913915242784 22.277159439594257 23 22.062449726233957 26.156464012241575 31.18832675515147 20.592759506372996 24 22.141994988023573 26.122315793796542 29.1287874391693 22.606901779010585 25 22.006875174646932 26.42652508621867 30.149104959571186 21.417494779563206 26 21.772011316674956 26.979949415998504 30.00338357510867 21.24465569221787 27 20.8284268518378 27.027957793694767 29.833021907532874 22.31059344693456 28 21.213185765415577 26.590860597598287 30.05469517916432 22.141258457821817 29 21.612630644834425 26.443710790926307 29.532227436955242 22.411431127284025 30 21.624392808965492 26.744929324347368 30.78464124729827 20.846036619388865 31 22.215938156460442 26.578607413332715 30.53625201653042 20.66920241367643 32 21.746701460650986 26.37525812035707 29.72071221131364 22.157328207678304 33 21.356519006496644 26.43759535834203 30.274158860190497 21.931726774970826 34 20.785284037292534 26.8524627338037 30.762456064857513 21.599797164046254 35 20.49009166006765 28.538090217361223 29.72287716372486 21.248940958846262 36 22.320346892333568 26.52780914850859 29.63775212767952 21.514091831478318 37 21.48056854774992 26.951648800973473 29.773206727511504 21.794575923765105 38 21.27255456349649 25.887585850406698 30.810732271718045 22.029127314378766 39 20.80452309892627 25.70081964651907 31.492223580215278 22.00243367433938 40 19.91548650721309 26.237727844501958 31.172413238974144 22.674372409310813 41 21.184483406644127 25.24488513253526 31.114338948520558 22.456292512300056 42 19.94093027781919 26.994724658227664 30.60044173956828 22.463903324384862 43 20.25379937988621 26.78273787470416 29.949549913089434 23.013912832320198 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1399.0 1 1309.0 2 1219.0 3 2386.0 4 3553.0 5 3553.0 6 5693.0 7 7833.0 8 8506.0 9 9179.0 10 13843.5 11 18508.0 12 18508.0 13 35129.0 14 51750.0 15 78801.0 16 105852.0 17 98112.0 18 90372.0 19 90372.0 20 97334.5 21 104297.0 22 85455.0 23 66613.0 24 74859.0 25 83105.0 26 83105.0 27 92450.0 28 101795.0 29 110194.0 30 118593.0 31 129760.0 32 140927.0 33 140927.0 34 156590.5 35 172254.0 36 187196.0 37 202138.0 38 214013.0 39 225888.0 40 225888.0 41 233464.0 42 241040.0 43 253777.5 44 266515.0 45 280883.5 46 295252.0 47 295252.0 48 369755.0 49 444258.0 50 417149.0 51 390040.0 52 357880.5 53 325721.0 54 325721.0 55 294448.0 56 263175.0 57 228798.5 58 194422.0 59 175665.5 60 156909.0 61 156909.0 62 139292.0 63 121675.0 64 106100.0 65 90525.0 66 77372.5 67 64220.0 68 64220.0 69 55005.0 70 45790.0 71 38224.0 72 30658.0 73 25092.0 74 19526.0 75 19526.0 76 15513.5 77 11501.0 78 9018.5 79 6536.0 80 5062.0 81 3588.0 82 3588.0 83 2707.5 84 1827.0 85 1410.5 86 994.0 87 752.5 88 511.0 89 511.0 90 417.5 91 324.0 92 218.5 93 113.0 94 82.0 95 51.0 96 51.0 97 34.0 98 17.0 99 11.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4480468.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.18842213765481 #Duplication Level Percentage of deduplicated Percentage of total 1 76.83410624145671 36.256802398912775 2 12.786457592420874 12.067455170327552 3 4.378229664195238 6.198052488289426 4 1.9974987374503088 3.7703525456895077 5 1.0252101051734437 2.418902361135697 6 0.6033301810830267 1.708211956400015 7 0.41373628857376865 1.3666493847219894 8 0.28643368577316264 1.0813082942966699 9 0.21357966613672227 0.9070638701111127 >10 1.2402801809698507 11.065054781837887 >50 0.12658281076293246 4.178380732312711 >100 0.08271340564720508 7.5534416704301135 >500 0.007010132831376753 2.22729266182703 >1k 0.00412082112461658 3.8220698223905982 >5k 3.789260804245106E-4 1.2138465150168003 >10k+ 3.315603203714468E-4 4.165115346300097 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 51418 1.147603330723487 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 45274 1.0104747986147875 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 35941 0.8021706661000592 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20232 0.4515599709673186 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 12732 0.28416674329556646 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 10467 0.2336139885386973 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10285 0.22955191288052942 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 9404 0.2098887884033543 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9352 0.2087281953581635 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 8332 0.1859627163948052 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5621 0.1254556443657225 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5483 0.12237560897656227 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 5472 0.12213009890931037 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 5377 0.12000978469213484 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5267 0.1175546840196158 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4914 0.10967604277053201 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4813 0.10742181397121908 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4785 0.10679687925457787 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.2319097022900287E-5 0.0 5 2.2319097022900287E-5 0.0 0.0 2.2319097022900287E-5 0.0 6 1.1159548511450143E-4 0.0 0.0 2.2319097022900287E-5 0.0 7 1.1159548511450143E-4 0.0 0.0 2.2319097022900287E-5 0.0 8 1.1159548511450143E-4 0.0 0.0 2.2319097022900287E-5 0.0 9 1.1159548511450143E-4 0.0 0.0 2.2319097022900286E-4 0.0 10 1.56233679160302E-4 0.0 0.0 3.571055523664046E-4 0.0 11 2.0087187320610257E-4 0.0 0.0 5.579774255725071E-4 0.0 12 2.0087187320610257E-4 0.0 0.0 8.704447838931112E-4 0.0 13 2.2319097022900286E-4 0.0 0.0 9.597211719847124E-4 0.0 14 2.4551006725190316E-4 0.0 0.0 0.0011159548511450142 0.0 15 2.4551006725190316E-4 0.0 0.0 0.001473060403511419 0.0 16 2.678291642748034E-4 0.0 0.0 0.002120314217175527 0.0 17 2.678291642748034E-4 0.0 0.0 0.00312467358320604 0.0 18 2.678291642748034E-4 0.0 0.0 0.0037942464938930487 0.0 19 3.12467358320604E-4 0.0 0.0 0.004709329471831961 0.0 20 3.12467358320604E-4 0.0 0.0 0.008079513122289904 0.0 21 3.12467358320604E-4 0.0 0.0 0.01323522453457987 0.0 22 3.347864553435043E-4 0.0 0.0 0.021470971336030074 0.0 23 3.347864553435043E-4 0.0 0.0 0.027631042114350555 0.0 24 3.7942464938930487E-4 0.0 2.2319097022900287E-5 0.03738448751335798 0.0 25 3.7942464938930487E-4 0.0 2.2319097022900287E-5 0.04416949300831967 0.0 26 3.7942464938930487E-4 0.0 2.2319097022900287E-5 0.055574551587021716 0.0 27 3.7942464938930487E-4 0.0 2.2319097022900287E-5 0.10818066326999769 0.0 28 4.0174374641220513E-4 0.0 2.2319097022900287E-5 0.22156167614633115 0.0 29 4.0174374641220513E-4 0.0 2.2319097022900287E-5 0.36368968598816015 0.0 30 4.2406284343510546E-4 0.0 2.2319097022900287E-5 0.5559687068404461 0.0 31 4.2406284343510546E-4 0.0 2.2319097022900287E-5 0.7918592432754793 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 15105 0.0 21.727242 1 TCTATAC 400 0.0 16.65 3 GTATTGG 1605 0.0 15.906543 1 GTATCAA 22775 0.0 14.418221 2 CTAATAC 955 0.0 14.335078 3 TATACTG 580 0.0 14.034484 5 ATTGGAC 1855 0.0 13.962264 3 TTGGACC 2455 0.0 13.338085 4 AATACTG 1125 0.0 13.155556 5 TAATACT 1100 0.0 13.118181 4 GTATACT 395 0.0 13.113924 4 TATAGCG 85 0.009410291 13.058824 5 ACCGTCC 170 3.7383506E-7 13.058824 8 TGCGACG 185 7.398921E-8 13.0 22 CGAACTA 670 0.0 12.977612 24 TGGACCC 2430 0.0 12.942388 5 CGCGATA 115 3.5807723E-4 12.869565 14 GGACCCT 2330 0.0 12.783261 6 TAGGTCG 180 7.4764284E-7 12.333334 21 CGCACTA 240 1.1314114E-9 12.333334 29 >>END_MODULE