##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088651_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 637050 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.599656227925596 31.0 31.0 34.0 30.0 34.0 2 31.796127462522566 31.0 31.0 34.0 30.0 34.0 3 31.880174240640454 31.0 31.0 34.0 30.0 34.0 4 35.575246840907305 37.0 35.0 37.0 33.0 37.0 5 35.47339769248882 37.0 35.0 37.0 33.0 37.0 6 35.51821678047249 37.0 35.0 37.0 33.0 37.0 7 35.37553567223923 37.0 35.0 37.0 33.0 37.0 8 35.416830704026374 37.0 35.0 37.0 33.0 37.0 9 37.00647672867122 39.0 37.0 39.0 33.0 39.0 10 36.83399105250765 39.0 37.0 39.0 32.0 39.0 11 36.92698061376658 39.0 37.0 39.0 33.0 39.0 12 36.78577034769641 39.0 37.0 39.0 32.0 39.0 13 36.82576877796092 39.0 37.0 39.0 32.0 39.0 14 37.790638097480574 40.0 37.0 41.0 32.0 41.0 15 37.80417706616435 40.0 37.0 41.0 32.0 41.0 16 37.69959971744761 39.0 37.0 41.0 32.0 41.0 17 37.73747743505219 39.0 37.0 41.0 32.0 41.0 18 37.71155168354132 39.0 37.0 41.0 32.0 41.0 19 37.767916176124324 40.0 37.0 41.0 32.0 41.0 20 37.635873165371635 39.0 37.0 41.0 32.0 41.0 21 37.5723757946786 39.0 37.0 41.0 32.0 41.0 22 37.43555136959422 39.0 36.0 41.0 32.0 41.0 23 37.24468566046621 39.0 36.0 41.0 31.0 41.0 24 37.08877011223609 39.0 36.0 41.0 31.0 41.0 25 37.28209245742092 39.0 36.0 41.0 31.0 41.0 26 37.16434502786281 39.0 36.0 41.0 31.0 41.0 27 37.04540930853151 39.0 36.0 41.0 31.0 41.0 28 36.87502864767287 39.0 35.0 41.0 30.0 41.0 29 36.760819401930775 39.0 35.0 41.0 30.0 41.0 30 36.54566831488894 39.0 35.0 40.0 30.0 41.0 31 36.38737618711247 38.0 35.0 40.0 30.0 41.0 32 36.19918687701122 38.0 35.0 40.0 30.0 41.0 33 36.04369201789498 38.0 35.0 40.0 30.0 41.0 34 35.841439447453105 38.0 35.0 40.0 28.0 41.0 35 35.70269994505926 38.0 35.0 40.0 27.0 41.0 36 35.508839180598066 38.0 34.0 40.0 27.0 41.0 37 35.41301938623342 38.0 34.0 40.0 26.0 41.0 38 35.2127399733145 38.0 34.0 40.0 25.0 41.0 39 35.10076289145279 38.0 34.0 40.0 24.0 41.0 40 34.9170944195903 38.0 34.0 40.0 24.0 41.0 41 34.76538262302802 38.0 33.0 40.0 23.0 41.0 42 34.48016953143395 38.0 33.0 40.0 22.0 41.0 43 34.12572796483793 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 4.0 15 3.0 16 8.0 17 15.0 18 51.0 19 81.0 20 204.0 21 454.0 22 885.0 23 1558.0 24 2486.0 25 3772.0 26 5610.0 27 7902.0 28 10632.0 29 13981.0 30 17630.0 31 21696.0 32 26414.0 33 32693.0 34 39860.0 35 48760.0 36 63295.0 37 88665.0 38 115725.0 39 134665.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.71132564162939 21.596421003060982 13.944117416215368 22.748135939094265 2 18.586610156188684 23.875049054234363 35.03586845616514 22.50247233341182 3 19.852601836590534 25.254218664155093 32.62930696177694 22.263872537477436 4 13.424534965858253 16.61094105643199 37.05533317635978 32.90919080134997 5 12.352719566753002 39.17651675692646 34.98124166078016 13.48952201554038 6 31.498783454987834 37.760144415665955 13.934228082568087 16.806844046778117 7 25.520131857781962 33.26881720430108 22.176281296601523 19.03476964131544 8 26.98516599952908 34.57169766894278 19.473196766344874 18.969939565183267 9 24.760850796640767 14.297778824268113 22.119770818617063 38.82159956047406 10 16.255082018679854 27.7748999293619 33.89608350992857 22.07393454202967 11 32.52994270465426 22.734793187347933 23.940350051016406 20.794914056981398 12 20.365905344949375 27.549642885173846 31.674593830939486 20.40985793893729 13 31.001805195824506 21.309944274389768 26.911388431049367 20.776862098736363 14 20.2745467388745 22.895063181853857 28.594929754336395 28.235460324935246 15 22.443293305078093 29.701436307982103 26.289145279020488 21.566125107919316 16 21.17981320147555 28.595871595636137 27.40538419276352 22.818931010124793 17 20.996939015775844 27.14151165528608 27.913978494623652 23.94757083431442 18 22.410956753786987 25.871909583235226 30.238599795934384 21.478533867043403 19 22.4192763519347 25.178557413075897 31.352013185778194 21.050153049211207 20 23.151087041833453 24.866023075111844 31.274782199199436 20.70810768385527 21 22.029981948041755 25.609449807707403 31.774272035162078 20.58629620908877 22 20.646417078722234 25.974884232006907 31.545404599325018 21.83329408994584 23 21.430499960756613 26.45851973942391 32.13468330586296 19.97629699395652 24 21.506318185385762 26.373283101797345 30.16403735970489 21.956361353112 25 21.225649478062948 26.62899301467703 31.078094341103522 21.0672631661565 26 21.2843575857468 27.08923946315046 30.95643983988698 20.66996311121576 27 20.38788164194333 27.232556314261046 30.642178792873402 21.73738325092222 28 20.622086178478927 26.850953614315987 30.838866650969308 21.688093556235774 29 21.09755906129817 26.847186249117023 30.298720665567853 21.75653402401695 30 20.86225570991288 26.999764539675063 31.623734400753474 20.514245349658584 31 21.396122753316067 26.824268110823326 31.559218271721218 20.220390864139393 32 21.01734557727023 26.682677968762263 30.67043403186563 21.629542422101874 33 20.81798916882505 26.78031551683541 31.167726238128875 21.23396907621066 34 20.182717212149754 27.262538262302805 31.635978337650105 20.91876618789734 35 19.79326583470685 28.99505533317636 30.47829840671847 20.73338042539832 36 21.543363943175574 27.025508201867986 30.583784632289458 20.847343222666982 37 20.87858095910839 27.6025429715093 30.308296052115217 21.21058001726709 38 20.73542108154776 26.483164586767128 31.320775449336786 21.460638882348324 39 20.345969704104856 26.296366062318498 31.964994898359627 21.392669335217015 40 19.491405698139864 26.87654030295895 31.56879365826858 22.063260340632603 41 20.716898202652853 25.945844125264895 31.443371791853075 21.89388588022918 42 19.518719095832353 27.6680009418413 30.876697276508906 21.93658268581744 43 19.988226983753236 27.396122753316064 30.113020955968917 22.502629306961776 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 185.0 1 211.5 2 238.0 3 443.0 4 648.0 5 648.0 6 1048.5 7 1449.0 8 1566.0 9 1683.0 10 2531.0 11 3379.0 12 3379.0 13 6003.5 14 8628.0 15 12955.0 16 17282.0 17 16097.0 18 14912.0 19 14912.0 20 15843.5 21 16775.0 22 13694.5 23 10614.0 24 11670.0 25 12726.0 26 12726.0 27 14156.0 28 15586.0 29 16788.5 30 17991.0 31 19631.5 32 21272.0 33 21272.0 34 23312.5 35 25353.0 36 27357.0 37 29361.0 38 31025.5 39 32690.0 40 32690.0 41 33489.0 42 34288.0 43 35884.5 44 37481.0 45 39166.0 46 40851.0 47 40851.0 48 51256.0 49 61661.0 50 57698.5 51 53736.0 52 49390.0 53 45044.0 54 45044.0 55 40396.0 56 35748.0 57 30737.0 58 25726.0 59 23025.0 60 20324.0 61 20324.0 62 18064.0 63 15804.0 64 13778.0 65 11752.0 66 10021.0 67 8290.0 68 8290.0 69 7026.0 70 5762.0 71 4919.0 72 4076.0 73 3310.0 74 2544.0 75 2544.0 76 1991.0 77 1438.0 78 1143.0 79 848.0 80 641.5 81 435.0 82 435.0 83 338.5 84 242.0 85 174.5 86 107.0 87 84.0 88 61.0 89 61.0 90 50.0 91 39.0 92 25.5 93 12.0 94 8.5 95 5.0 96 5.0 97 3.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 637050.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.6134513553498 #Duplication Level Percentage of deduplicated Percentage of total 1 88.57803080980545 59.00488346501651 2 6.967755913655011 9.282925392204177 3 1.7676177221327856 3.5324135144443964 4 0.7541972109659006 2.0095871690007003 5 0.43203674004203657 1.4389729183257052 6 0.2706602773498584 1.081776913144217 7 0.2090155586265248 0.9746273422955489 8 0.1498238704952577 0.7984228087284861 9 0.11929345131079955 0.715189366431336 >10 0.6666522627032716 8.138236930519723 >50 0.050242103680881944 2.3270465702699914 >100 0.02901300507184642 3.8690838409271247 >500 0.0033022932601978854 1.5223990145658455 >1k 0.0016511466300989427 1.8765622283992045 >5k 7.07634270042404E-4 3.427872525726957 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8260 1.2966015226434346 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7372 1.1572090102817674 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6184 0.9707244329330508 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3335 0.5235067891060357 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1770 0.2778431834235931 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1598 0.250843732831018 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1483 0.23279177458598227 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1341 0.2105015304921121 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1250 0.19621693744604035 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1166 0.18303115924966645 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 904 0.14190408916097638 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 833 0.13075896711404128 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 828 0.1299740993642571 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 825 0.12950317871438663 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 775 0.12165450121654502 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 753 0.1182010831174947 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 714 0.11207911466917825 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 699 0.10972451141982575 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 1.5697354995683227E-4 0.0 0.0 0.0 0.0 6 1.5697354995683227E-4 0.0 0.0 0.0 0.0 7 1.5697354995683227E-4 0.0 0.0 0.0 0.0 8 1.5697354995683227E-4 0.0 0.0 0.0 0.0 9 1.5697354995683227E-4 0.0 0.0 1.5697354995683227E-4 0.0 10 1.5697354995683227E-4 0.0 0.0 1.5697354995683227E-4 0.0 11 1.5697354995683227E-4 0.0 0.0 1.5697354995683227E-4 0.0 12 1.5697354995683227E-4 0.0 0.0 7.848677497841614E-4 0.0 13 1.5697354995683227E-4 0.0 0.0 0.0012557883996546582 0.0 14 4.709206498704968E-4 0.0 0.0 0.0015697354995683227 0.0 15 4.709206498704968E-4 0.0 0.0 0.0023546032493524842 0.0 16 4.709206498704968E-4 0.0 0.0 0.0031394709991366455 0.0 17 4.709206498704968E-4 3.1394709991366455E-4 0.0 0.004395259398791303 0.0 18 4.709206498704968E-4 6.278941998273291E-4 0.0 0.004866180048661801 0.0 19 4.709206498704968E-4 6.278941998273291E-4 0.0 0.005964994898359627 0.0 20 4.709206498704968E-4 6.278941998273291E-4 0.0 0.01036025429715093 0.0 21 4.709206498704968E-4 6.278941998273291E-4 0.0 0.01789498469507888 0.0 22 4.709206498704968E-4 6.278941998273291E-4 0.0 0.02762734479240248 0.0 23 4.709206498704968E-4 6.278941998273291E-4 0.0 0.03484812809041676 0.0 24 4.709206498704968E-4 7.848677497841614E-4 0.0 0.044580488187740366 0.0 25 4.709206498704968E-4 7.848677497841614E-4 0.0 0.05007456243622949 0.0 26 4.709206498704968E-4 7.848677497841614E-4 0.0 0.06121968448316459 0.0 27 4.709206498704968E-4 7.848677497841614E-4 0.0 0.10423043717133663 0.0 28 4.709206498704968E-4 7.848677497841614E-4 0.0 0.20265285299427047 0.0 29 4.709206498704968E-4 7.848677497841614E-4 0.0 0.3120634173141826 0.0 30 4.709206498704968E-4 7.848677497841614E-4 0.0 0.473589200219763 0.0 31 4.709206498704968E-4 7.848677497841614E-4 0.0 0.6828349423122204 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGACCG 25 0.005494527 29.6 5 AGTCGTG 35 8.865036E-4 26.428572 20 GGTATCA 2040 0.0 26.02696 1 TCTATAC 40 0.0019302479 23.125 3 CCGTTTA 65 2.6797297E-6 22.76923 27 CGCCGTT 60 3.722931E-5 21.583332 25 GCTAGTG 45 0.0038239644 20.555555 2 TAGGACA 45 0.0038239644 20.555555 4 GTATTGG 245 0.0 18.877552 1 GACCGGC 50 0.0070315236 18.5 7 GCCCGTG 70 1.2181147E-4 18.5 24 CTAATAC 130 6.9485395E-10 18.5 3 TTGGACC 280 0.0 17.839287 4 CGTTTAC 75 2.0654444E-4 17.266666 28 GCCGTTT 75 2.0654444E-4 17.266666 26 TAATACT 145 2.9704097E-9 16.586205 4 CGAGGCT 90 4.4409535E-5 16.444445 33 TTACGGC 90 4.4409535E-5 16.444445 18 GTATCAA 3245 0.0 16.362095 2 TATACTA 170 8.54925E-11 16.32353 5 >>END_MODULE