##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088638_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2642364 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.60383164469392 31.0 31.0 34.0 30.0 34.0 2 31.781647418750786 31.0 31.0 34.0 30.0 34.0 3 31.857100687111995 31.0 31.0 34.0 30.0 34.0 4 35.56082318711578 37.0 35.0 37.0 33.0 37.0 5 35.46747457958101 37.0 35.0 37.0 33.0 37.0 6 35.51009096400042 37.0 35.0 37.0 33.0 37.0 7 35.36864943664083 37.0 35.0 37.0 33.0 37.0 8 35.398765650758186 37.0 35.0 37.0 33.0 37.0 9 36.98653024337298 39.0 37.0 39.0 33.0 39.0 10 36.85028141467262 39.0 37.0 39.0 32.0 39.0 11 36.90078543304405 39.0 37.0 39.0 33.0 39.0 12 36.79617758946156 39.0 37.0 39.0 32.0 39.0 13 36.84312683642375 39.0 37.0 39.0 32.0 39.0 14 37.83528461635112 40.0 37.0 41.0 32.0 41.0 15 37.798698816665684 40.0 37.0 41.0 32.0 41.0 16 37.69726767394651 39.0 37.0 41.0 32.0 41.0 17 37.75612746767667 39.0 37.0 41.0 32.0 41.0 18 37.7404585439402 39.0 37.0 41.0 32.0 41.0 19 37.7738316901078 40.0 37.0 41.0 32.0 41.0 20 37.66011647146267 39.0 37.0 41.0 32.0 41.0 21 37.55986230511769 39.0 37.0 41.0 32.0 41.0 22 37.42182757561032 39.0 36.0 41.0 32.0 41.0 23 37.29177433540572 39.0 36.0 41.0 31.0 41.0 24 37.1511309569764 39.0 36.0 41.0 31.0 41.0 25 36.94982977364209 39.0 36.0 41.0 31.0 41.0 26 37.08079545437343 39.0 36.0 41.0 31.0 41.0 27 36.9995163421845 39.0 36.0 41.0 31.0 41.0 28 36.875057713471726 39.0 35.0 41.0 30.0 41.0 29 36.728933636698045 39.0 35.0 40.0 30.0 41.0 30 36.592344960800254 39.0 35.0 40.0 30.0 41.0 31 36.39582018223076 38.0 35.0 40.0 30.0 41.0 32 36.2787810460633 38.0 35.0 40.0 30.0 41.0 33 36.0687108210678 38.0 35.0 40.0 30.0 41.0 34 35.92790811561163 38.0 35.0 40.0 29.0 41.0 35 35.74413290523183 38.0 35.0 40.0 28.0 41.0 36 35.59336752998451 38.0 35.0 40.0 27.0 41.0 37 35.4149746212104 38.0 34.0 40.0 26.0 41.0 38 35.320710545556935 38.0 34.0 40.0 25.0 41.0 39 35.17072704593311 38.0 34.0 40.0 25.0 41.0 40 34.97983964359187 38.0 34.0 40.0 24.0 41.0 41 34.843031088828035 38.0 34.0 40.0 23.0 41.0 42 34.60981757244649 38.0 33.0 40.0 23.0 41.0 43 34.23416758629772 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 2.0 14 10.0 15 9.0 16 31.0 17 70.0 18 186.0 19 420.0 20 993.0 21 1938.0 22 3641.0 23 6219.0 24 9998.0 25 15500.0 26 23071.0 27 32417.0 28 43620.0 29 56988.0 30 72707.0 31 88597.0 32 108130.0 33 134387.0 34 164282.0 35 203328.0 36 263105.0 37 371933.0 38 497235.0 39 543544.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.247080266004225 21.513765703741043 14.468975508294847 22.77017852195988 2 18.890281581190177 23.363473011288377 35.225426928311165 22.520818479210284 3 19.910769295978902 24.70121451851448 32.51845695748201 22.869559228024603 4 13.88362844785957 16.34767200885268 36.05827963142095 33.71041991186679 5 12.875251100908125 38.550139193540325 34.607608944112165 13.967000761439378 6 32.24737394242428 37.18999350581525 13.662387165432166 16.9002453863283 7 25.73827829928049 32.981943441554606 21.738299492424208 19.541478766740692 8 26.839829788780044 34.63440313295216 19.0645951882481 19.461171890019692 9 24.448826883805562 14.57395725948431 22.02751021433837 38.949705642371754 10 16.841775016613912 27.31149077114281 33.180515629186594 22.66621858305669 11 33.04783141156934 22.567178481087392 23.44839696574734 20.936593141595935 12 20.988137894703378 27.262443781401807 30.86300751902463 20.886410804870184 13 31.224464154068098 20.922136389990175 26.50565932626996 21.347740129671763 14 20.44994557903453 22.858054378579183 28.004430880832466 28.68756916155382 15 22.928029597738995 29.369647785089413 25.72268620068999 21.979636416481604 16 21.67116264072626 28.183437255427336 26.871543814553938 23.273856289292468 17 21.699470625545914 26.61264685713248 27.32712071463281 24.360761802688806 18 22.687373881872443 25.419889159858368 29.813152162230487 22.0795847960387 19 22.81082394401377 24.736713034237525 30.828644350286332 21.623818671462374 20 23.609805462078654 24.363940774246093 30.71495827221382 21.311295491461436 21 22.37295845689693 25.301472469349417 31.1263323296866 21.199236744067054 22 21.2904807967411 25.70788884498881 30.666441111065694 22.335189247204397 23 22.08363420028429 25.909110175585198 31.625582243778677 20.381673380351835 24 22.210565993178836 25.991271452381277 29.16642067481997 22.631741879619916 25 22.135670937085123 26.02586169051652 30.285607887482573 21.55285948491578 26 21.8025601317608 26.75816049567736 30.300480932982737 21.138798439579105 27 20.94128590913288 26.80724533031785 29.839908506170985 22.411560254378276 28 21.153860709576726 26.383004007017956 30.249995837061057 22.213139446344258 29 21.75582168088878 26.250357634300194 29.661507649967984 22.332313034843043 30 21.42199182247412 26.386712807168127 31.230443648187762 20.960851722169995 31 21.94951187648636 26.163768504263608 31.05771952690848 20.829000092341555 32 21.58586023727238 25.8591170633569 30.12363171765888 22.43139098171183 33 21.326963279850922 25.96712640650569 30.666895249859593 22.039015063783793 34 20.734690602808698 26.32956700893594 31.15180194704439 21.783940441210977 35 20.380878637462516 28.096961660089224 30.051423649429072 21.47073605301919 36 22.276529652992547 25.875693129334188 30.154399620945487 21.693377596727778 37 21.277121547220595 26.28615890921917 30.198943067647 22.237776475913236 38 21.080441604563184 25.094498714030316 31.52226566816684 22.30279401323966 39 20.503988095508415 25.03247092376372 32.20824231635005 22.255298664377808 40 19.650169318080323 25.821158629166913 31.698017381405442 22.830654671347325 41 20.73775603966751 24.763885672072433 31.834259019574894 22.664099268685163 42 19.624661855823046 26.75657100989871 31.042695101810345 22.576072032467895 43 19.8804555314862 26.472317969817937 30.391270846862884 23.25595565183298 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 215.0 1 418.5 2 622.0 3 1556.0 4 2490.0 5 2490.0 6 3818.0 7 5146.0 8 5731.5 9 6317.0 10 9157.5 11 11998.0 12 11998.0 13 22280.5 14 32563.0 15 51108.5 16 69654.0 17 63246.5 18 56839.0 19 56839.0 20 60027.5 21 63216.0 22 49323.0 23 35430.0 24 38889.0 25 42348.0 26 42348.0 27 45996.5 28 49645.0 29 54345.5 30 59046.0 31 65869.5 32 72693.0 33 72693.0 34 82528.5 35 92364.0 36 102710.0 37 113056.0 38 122296.5 39 131537.0 40 131537.0 41 137241.0 42 142945.0 43 155468.5 44 167992.0 45 176755.0 46 185518.0 47 185518.0 48 231808.5 49 278099.0 50 261358.0 51 244617.0 52 225073.0 53 205529.0 54 205529.0 55 182397.5 56 159266.0 57 135864.5 58 112463.0 59 99688.5 60 86914.0 61 86914.0 62 77021.0 63 67128.0 64 58071.0 65 49014.0 66 41817.5 67 34621.0 68 34621.0 69 29300.5 70 23980.0 71 20008.5 72 16037.0 73 13026.5 74 10016.0 75 10016.0 76 7929.5 77 5843.0 78 4587.0 79 3331.0 80 2598.5 81 1866.0 82 1866.0 83 1388.5 84 911.0 85 720.5 86 530.0 87 405.0 88 280.0 89 280.0 90 231.0 91 182.0 92 125.0 93 68.0 94 48.0 95 28.0 96 28.0 97 16.0 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2642364.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.08470135182264 #Duplication Level Percentage of deduplicated Percentage of total 1 79.81391578575472 36.78200472706029 2 10.990029043570523 10.129444126416091 3 3.5408561898031246 4.895379001104888 4 1.6073734613909436 2.9630130371618826 5 0.884818309080424 2.0388293762298018 6 0.5560514988214329 1.5375280355651457 7 0.3727556659943238 1.2024833481183714 8 0.30328938866272737 1.1181600719758924 9 0.2088209118272091 0.8661104421814999 >10 1.451258102942994 12.952940815885668 >50 0.1536996447823646 4.9487349324206376 >100 0.10306426525631585 9.132303422671779 >500 0.008802616000441323 2.740064833869143 >1k 0.004442441719848557 3.525009451090127 >5k 4.936046355387285E-4 1.3615589276595257 >10k+ 3.2906975702581907E-4 3.8064354505893796 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34940 1.3223007882335667 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 29183 1.1044277018609094 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 23839 0.9021845589782482 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12438 0.4707148598754751 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6625 0.25072245913129304 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6432 0.24341839352943045 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6244 0.23630355242502546 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6106 0.2310809562951963 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5450 0.2062547022287618 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5056 0.19134381182910457 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3476 0.13154887063250936 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3235 0.12242824985505404 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3179 0.12030893548352914 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3081 0.1166001353333606 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3079 0.11652444553437755 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2901 0.10978805342488772 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2888 0.10929606973149801 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 3.784489949151593E-5 0.0 3.784489949151593E-5 0.0 3 0.0 3.784489949151593E-5 0.0 3.784489949151593E-5 0.0 4 0.0 3.784489949151593E-5 0.0 7.568979898303186E-5 0.0 5 0.0 3.784489949151593E-5 0.0 7.568979898303186E-5 0.0 6 0.0 3.784489949151593E-5 0.0 7.568979898303186E-5 0.0 7 0.0 3.784489949151593E-5 0.0 7.568979898303186E-5 0.0 8 7.568979898303186E-5 3.784489949151593E-5 0.0 7.568979898303186E-5 0.0 9 7.568979898303186E-5 3.784489949151593E-5 0.0 3.784489949151593E-4 0.0 10 1.1353469847454779E-4 3.784489949151593E-5 0.0 7.947428893218346E-4 0.0 11 1.1353469847454779E-4 3.784489949151593E-5 0.0 0.001097502085253962 0.0 12 1.1353469847454779E-4 3.784489949151593E-5 0.0 0.0018165551755927646 0.0 13 1.1353469847454779E-4 3.784489949151593E-5 0.0 0.0019679347735588283 0.0 14 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.002195004170507924 0.0 15 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.0029140572608467264 0.0 16 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.003860179748134625 0.0 17 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.0055632002252528415 0.0 18 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.006357943114574677 0.0 19 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.008439412586608052 0.0 20 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.01627330678135185 0.0 21 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.02724832763389147 0.0 22 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.044316377304565155 0.0 23 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.05445881036829142 0.0 24 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.0691426313709996 0.0 25 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.07833894194743797 0.0 26 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.09116836287506187 0.0 27 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.15247710005131768 0.0 28 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.3024564367361953 0.0 29 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.5043589755234328 0.0 30 1.5137959796606372E-4 3.784489949151593E-5 0.0 0.7997762609542062 0.0 31 1.5137959796606372E-4 3.784489949151593E-5 0.0 1.2226173229729136 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9840 0.0 22.278965 1 GTATTGG 1265 0.0 15.648222 1 AGTTCCG 300 0.0 14.8 32 TCTATAC 225 1.8189894E-12 14.8 3 GTATCAA 15010 0.0 14.580613 2 TAATACT 725 0.0 14.5448265 4 TAGCGAA 360 0.0 14.388888 10 ACCGTTA 470 0.0 14.170212 8 TGGACCC 1800 0.0 14.080556 5 CCGTTTA 480 0.0 13.874999 27 GTAGCGA 375 0.0 13.813333 9 GTATTAG 670 0.0 13.80597 1 ATTGGAC 1530 0.0 13.784313 3 CGTTTAC 510 0.0 13.784313 28 GGTAGCG 390 0.0 13.756411 8 AATACTG 700 0.0 13.742858 5 TTAGAGT 230 4.0017767E-11 13.673913 4 GGACCCT 1870 0.0 13.652407 6 CTAAGGT 585 0.0 13.59829 4 TTGGACC 1975 0.0 13.582277 4 >>END_MODULE