##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088637_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 715250 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.548325760223698 31.0 31.0 34.0 30.0 34.0 2 31.72955609926599 31.0 31.0 34.0 30.0 34.0 3 31.774438308283816 31.0 31.0 34.0 30.0 34.0 4 35.50507235232436 37.0 35.0 37.0 33.0 37.0 5 35.42144425026215 37.0 35.0 37.0 33.0 37.0 6 35.4637119888151 37.0 35.0 37.0 33.0 37.0 7 35.325796574624256 37.0 35.0 37.0 32.0 37.0 8 35.36553093324012 37.0 35.0 37.0 33.0 37.0 9 36.94473680531283 39.0 37.0 39.0 33.0 39.0 10 36.82585669346383 39.0 37.0 39.0 32.0 39.0 11 36.85676197133869 39.0 37.0 39.0 32.0 39.0 12 36.7476392869626 39.0 37.0 39.0 32.0 39.0 13 36.79670464872422 39.0 37.0 39.0 32.0 39.0 14 37.71069556099266 40.0 37.0 41.0 32.0 41.0 15 37.67958476057323 39.0 37.0 41.0 32.0 41.0 16 37.56673890248165 39.0 36.0 41.0 32.0 41.0 17 37.68016218105557 39.0 37.0 41.0 32.0 41.0 18 37.69392380286613 39.0 37.0 41.0 32.0 41.0 19 37.755665851101014 40.0 37.0 41.0 32.0 41.0 20 37.64359314924852 39.0 37.0 41.0 32.0 41.0 21 37.54917441454037 39.0 36.0 41.0 32.0 41.0 22 37.40455505068158 39.0 36.0 41.0 32.0 41.0 23 37.27228102062216 39.0 36.0 41.0 31.0 41.0 24 37.120588605382736 39.0 36.0 41.0 31.0 41.0 25 36.923630898287314 39.0 36.0 41.0 31.0 41.0 26 37.02996714435512 39.0 36.0 41.0 31.0 41.0 27 36.93846207619713 39.0 35.0 41.0 31.0 41.0 28 36.791605732261445 39.0 35.0 41.0 30.0 41.0 29 36.61992590003495 39.0 35.0 40.0 30.0 41.0 30 36.47100034952814 39.0 35.0 40.0 30.0 41.0 31 36.22275847605732 38.0 35.0 40.0 30.0 41.0 32 36.08376092275428 38.0 35.0 40.0 30.0 41.0 33 35.85640685075148 38.0 35.0 40.0 29.0 41.0 34 35.69363579168123 38.0 35.0 40.0 28.0 41.0 35 35.47722894092974 38.0 34.0 40.0 27.0 41.0 36 35.31525900034953 38.0 34.0 40.0 26.0 41.0 37 35.12373296050332 38.0 34.0 40.0 25.0 41.0 38 35.00314155889549 38.0 34.0 40.0 24.0 41.0 39 34.8422341838518 38.0 34.0 40.0 24.0 41.0 40 34.60526529185599 38.0 33.0 40.0 23.0 41.0 41 34.452078294302694 38.0 33.0 40.0 22.0 41.0 42 34.17318280321566 38.0 33.0 40.0 20.0 41.0 43 33.78633205173016 38.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 0.0 14 6.0 15 4.0 16 18.0 17 20.0 18 60.0 19 103.0 20 283.0 21 585.0 22 1100.0 23 1903.0 24 3158.0 25 4706.0 26 6757.0 27 9528.0 28 13090.0 29 16562.0 30 20841.0 31 24549.0 32 30262.0 33 37033.0 34 44875.0 35 55324.0 36 72088.0 37 102706.0 38 130185.0 39 139503.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.621950367004544 22.36602586508214 16.948199930094372 21.063823837818944 2 18.417756029360362 23.491506466270533 37.166165676336945 20.924571828032157 3 18.90024466969591 25.364557846906678 34.090457881859486 21.644739601537925 4 14.003495281370151 17.5698007689619 35.25480601188396 33.17189793778399 5 12.633904229290458 38.479972037749036 34.47116392869626 14.414959804264244 6 30.383921705697308 38.160782943026916 13.76903180706047 17.686263544215308 7 23.89234533379937 33.96001398112548 21.906606081789583 20.241034603285566 8 25.563928696260046 35.42411744145404 19.17818944425026 19.833764418035653 9 23.23439356868228 15.550786438308284 22.917022020272633 38.29779797273681 10 17.860048933939183 27.43795875567983 32.54861936385879 22.153372946522197 11 31.792520097867875 23.571758126529186 23.364837469416287 21.270884306186648 12 21.274938832576023 28.769521146452288 30.027403005941977 19.92813701502971 13 31.78217406501223 21.37140859839217 26.830059419783293 20.016357916812304 14 20.00880810905278 24.11981824536875 28.84208318769661 27.02929045788186 15 22.468926948619362 29.86927647675638 26.437329605033206 21.224466969591052 16 20.593918210415936 28.061516952114644 28.030618664802514 23.3139461726669 17 21.445508563439354 26.660747990213213 27.96183152743796 23.93191191890947 18 22.472841663753933 24.671094023068857 31.08060118839567 21.775463124781545 19 22.73974134917861 24.230548759175115 32.50625655365257 20.523453337993708 20 23.09262495630898 23.873610625655363 32.51506466270534 20.518699755330307 21 22.09325410695561 24.765047186298496 33.04397063963649 20.0977280671094 22 20.36672492135617 25.449702901083537 32.51198881509961 21.671583362460677 23 21.623068857042995 25.441034603285566 33.711988815099616 19.223907724571827 24 21.507305138063614 25.736176162181057 31.095421181405104 21.66109751835023 25 21.459210066410346 25.686822789234533 32.037189793778396 20.81677735057672 26 20.93226144704649 26.679063264592802 32.30968192939532 20.0789933589654 27 19.871094023068856 26.514365606431316 31.98671793079343 21.627822439706396 28 20.390073400908772 26.41468018175463 31.85207969241524 21.343166724921357 29 20.63698007689619 26.127368053128276 31.140999650471862 22.09465221950367 30 20.76700454386578 26.1511359664453 32.93981125480601 20.14204823488291 31 21.398531981824537 25.582243970639635 32.999650471862985 20.01957357567284 32 20.71723173715484 25.606151695211466 31.928276826284517 21.74833974134918 33 20.296819293953163 25.679133170220204 32.4883607130374 21.535686822789234 34 19.89947570779448 25.98504019573576 33.06144704648724 21.054037049982526 35 19.46564138413142 28.09884655714785 31.767074449493183 20.668437609227546 36 21.42649423278574 25.661377140859837 31.856693463823838 21.055435162530582 37 20.32883607130374 26.544145403705 31.784690667598742 21.342327857392522 38 20.466410346032855 25.048724222299896 33.1440754980776 21.340789933589654 39 19.613282069206573 25.186578119538623 33.929255505068156 21.270884306186648 40 18.491017126878713 26.32506116742398 33.350297098916464 21.833624606780848 41 19.989933589653965 25.23914715134568 33.06550157287661 21.70541768612373 42 18.83998601887452 27.362041244320167 32.08500524292205 21.71296749388326 43 19.15442153093324 27.44592799720377 30.910031457532334 22.489619014330653 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 59.0 1 122.0 2 185.0 3 468.0 4 751.0 5 751.0 6 1149.0 7 1547.0 8 1805.5 9 2064.0 10 3016.5 11 3969.0 12 3969.0 13 7058.0 14 10147.0 15 17525.0 16 24903.0 17 22480.0 18 20057.0 19 20057.0 20 20853.5 21 21650.0 22 16393.5 23 11137.0 24 11931.5 25 12726.0 26 12726.0 27 13702.0 28 14678.0 29 15922.0 30 17166.0 31 18827.5 32 20489.0 33 20489.0 34 22614.5 35 24740.0 36 27465.0 37 30190.0 38 32335.0 39 34480.0 40 34480.0 41 35788.5 42 37097.0 43 40311.0 44 43525.0 45 46998.5 46 50472.0 47 50472.0 48 65037.5 49 79603.0 50 73363.5 51 67124.0 52 60753.0 53 54382.0 54 54382.0 55 47249.0 56 40116.0 57 33694.0 58 27272.0 59 23586.5 60 19901.0 61 19901.0 62 17414.0 63 14927.0 64 12659.5 65 10392.0 66 8750.0 67 7108.0 68 7108.0 69 5983.0 70 4858.0 71 4068.5 72 3279.0 73 2598.5 74 1918.0 75 1918.0 76 1513.5 77 1109.0 78 858.5 79 608.0 80 448.0 81 288.0 82 288.0 83 220.5 84 153.0 85 114.0 86 75.0 87 60.0 88 45.0 89 45.0 90 39.0 91 33.0 92 22.5 93 12.0 94 11.0 95 10.0 96 10.0 97 7.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 715250.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.038283873696116 #Duplication Level Percentage of deduplicated Percentage of total 1 85.65621079225126 46.287146343368256 2 7.643514049442689 8.26084763992737 3 2.295930801796994 3.7220448126560606 4 1.0955807973739022 2.368132245402451 5 0.652556554386717 1.7631518164795215 6 0.4438873684140156 1.4392146973382702 7 0.3049194198721708 1.1534125518758571 8 0.27008312137135443 1.1675862705727336 9 0.19906385642253613 0.9681362264118322 >10 1.255127388609293 12.928114213787484 >50 0.1144860654625922 4.344357579132103 >100 0.059833170723761465 6.1023646205264646 >500 0.0051803611016121584 1.918553875256841 >1k 0.002849198605886687 2.8934373465608383 >5k 2.590180550806079E-4 1.2822552018113313 >10k+ 5.180361101612158E-4 3.4012445588926266 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13363 1.8682977979727369 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10937 1.5291156938133519 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9161 1.280810905277875 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3420 0.47815449143656064 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2542 0.35540020971688224 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2365 0.3306536176162181 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2202 0.30786438308283814 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1939 0.27109402306885705 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1870 0.2614470464872422 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1481 0.20706046836770362 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1371 0.1916812303390423 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1188 0.1660957707095421 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1159 0.16204124432016778 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1135 0.1586857742048235 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 912 0.12750786438308284 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 893 0.1248514505417686 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 884 0.12359314924851451 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 827 0.11562390772457184 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 815 0.11394617266689969 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 801 0.11198881509961552 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 784 0.10961202376791332 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 731 0.1022020272631947 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 1.398112548060119E-4 0.0 9 0.0 0.0 0.0 8.388675288360713E-4 0.0 10 0.0 0.0 0.0 0.0018175463124781544 0.0 11 1.398112548060119E-4 0.0 0.0 0.0030758476057322613 0.0 12 1.398112548060119E-4 0.0 0.0 0.0047535826634044044 0.0 13 1.398112548060119E-4 0.0 0.0 0.005592450192240475 0.0 14 2.796225096120238E-4 0.0 0.0 0.006011883956658511 0.0 15 2.796225096120238E-4 0.0 0.0 0.008947920307584761 0.0 16 2.796225096120238E-4 0.0 0.0 0.01048584411045089 0.0 17 2.796225096120238E-4 0.0 0.0 0.014959804264243272 0.0 18 2.796225096120238E-4 0.0 0.0 0.018035651869975532 0.0 19 2.796225096120238E-4 0.0 0.0 0.022090178259349877 0.0 20 2.796225096120238E-4 0.0 0.0 0.03467319119189095 0.0 21 2.796225096120238E-4 0.0 0.0 0.050611674239776305 0.0 22 2.796225096120238E-4 0.0 0.0 0.08220901782593498 0.0 23 2.796225096120238E-4 0.0 0.0 0.10555749737853898 0.0 24 2.796225096120238E-4 0.0 0.0 0.13337993708493534 0.0 25 2.796225096120238E-4 0.0 0.0 0.15001747640685076 0.0 26 2.796225096120238E-4 0.0 0.0 0.1729465221950367 0.0 27 2.796225096120238E-4 0.0 0.0 0.258790632645928 0.0 28 2.796225096120238E-4 0.0 0.0 0.5152044739601538 0.0 29 2.796225096120238E-4 0.0 0.0 0.882348829080741 0.0 30 4.1943376441803563E-4 0.0 0.0 1.375183502271933 0.0 31 5.592450192240476E-4 0.0 0.0 1.9923103809856693 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTATAC 35 2.3870563E-5 31.714285 3 TGGTACG 40 0.0019304781 23.125 26 GGTATCA 3465 0.0 22.370853 1 ATCTCGT 55 5.1404844E-4 20.181818 7 CTCGTAT 60 9.232165E-4 18.5 9 TCGTATG 70 1.2183804E-4 18.5 10 GGTACGT 50 0.0070323497 18.499998 27 GACGTTT 50 0.0070323497 18.499998 23 GTACGTG 50 0.0070323497 18.499998 28 TCGCTAC 85 2.7207876E-5 17.411764 27 TCTAATA 205 0.0 17.146341 2 TTCGTTA 65 0.0015791456 17.076923 30 TCTCACG 65 0.0015791456 17.076923 17 GGTAAAC 155 4.0017767E-10 16.709679 35 TATTAAC 100 5.8715505E-6 16.65 2 TCCAGAC 90 4.442179E-5 16.444445 3 GCTCGGA 135 2.2149834E-8 16.444445 11 TAGTACT 90 4.442179E-5 16.444445 4 GTACTGC 170 8.54925E-11 16.32353 6 TGTACTG 195 1.8189894E-12 16.128206 5 >>END_MODULE