##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088635_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 721927 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.774003465724373 31.0 31.0 34.0 30.0 34.0 2 31.96413349272156 31.0 31.0 34.0 30.0 34.0 3 32.04432442615389 33.0 31.0 34.0 30.0 34.0 4 35.720193315944684 37.0 35.0 37.0 35.0 37.0 5 35.63157909317701 37.0 35.0 37.0 33.0 37.0 6 35.662936834333664 37.0 35.0 37.0 33.0 37.0 7 35.539866219160665 37.0 35.0 37.0 33.0 37.0 8 35.55582074087823 37.0 35.0 37.0 33.0 37.0 9 37.182172158680864 39.0 37.0 39.0 33.0 39.0 10 37.045850896281756 39.0 37.0 39.0 33.0 39.0 11 37.095526278972805 39.0 37.0 39.0 33.0 39.0 12 36.99788898323515 39.0 37.0 39.0 33.0 39.0 13 37.0344162221388 39.0 37.0 39.0 33.0 39.0 14 38.09320609978571 40.0 37.0 41.0 33.0 41.0 15 38.05915002486401 40.0 37.0 41.0 33.0 41.0 16 37.96133542588101 40.0 37.0 41.0 33.0 41.0 17 37.977115414716444 40.0 37.0 41.0 33.0 41.0 18 37.948124948921425 40.0 37.0 41.0 33.0 41.0 19 37.97254985614889 40.0 37.0 41.0 33.0 41.0 20 37.859772525476956 40.0 37.0 41.0 32.0 41.0 21 37.75277001691307 40.0 37.0 41.0 32.0 41.0 22 37.60517060589228 39.0 37.0 41.0 32.0 41.0 23 37.48108742296659 39.0 36.0 41.0 32.0 41.0 24 37.3393431745869 39.0 36.0 41.0 31.0 41.0 25 37.147790566082165 39.0 36.0 41.0 31.0 41.0 26 37.309222400602835 39.0 36.0 41.0 31.0 41.0 27 37.24560377988356 39.0 36.0 41.0 31.0 41.0 28 37.13092459486901 39.0 36.0 41.0 31.0 41.0 29 36.99425980743205 39.0 36.0 41.0 31.0 41.0 30 36.874785123703646 39.0 35.0 41.0 30.0 41.0 31 36.70203912583959 39.0 35.0 41.0 30.0 41.0 32 36.58690837162206 39.0 35.0 40.0 30.0 41.0 33 36.388366136742356 39.0 35.0 40.0 30.0 41.0 34 36.253118390086534 38.0 35.0 40.0 30.0 41.0 35 36.07220536148392 38.0 35.0 40.0 29.0 41.0 36 35.93867108447253 38.0 35.0 40.0 29.0 41.0 37 35.781887919415674 38.0 35.0 40.0 27.0 41.0 38 35.705657220189856 38.0 35.0 40.0 27.0 41.0 39 35.58464082933593 38.0 35.0 40.0 26.0 41.0 40 35.417133588299095 38.0 35.0 40.0 25.0 41.0 41 35.286772762343006 38.0 34.0 40.0 25.0 41.0 42 35.079678416238764 38.0 34.0 40.0 24.0 41.0 43 34.71671373975485 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 0.0 14 2.0 15 5.0 16 4.0 17 22.0 18 55.0 19 94.0 20 225.0 21 408.0 22 805.0 23 1441.0 24 2330.0 25 3650.0 26 5242.0 27 7557.0 28 10357.0 29 13748.0 30 17502.0 31 21990.0 32 27004.0 33 34001.0 34 42390.0 35 53415.0 36 70238.0 37 100650.0 38 140406.0 39 168384.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.7412009801545 21.022070098500265 13.60483816230727 23.63189075903796 2 18.954963590501535 22.45753379496819 35.352466385105416 23.235036229424857 3 19.80172510516991 24.448455314734037 32.0157024186656 23.734117161430447 4 13.895172226554761 16.203992924492365 36.19382569151728 33.707009157435586 5 13.20978436877967 38.00204175768464 34.88995424745161 13.898219626084076 6 32.72366873658971 36.875612077121374 13.978560159129664 16.422159027159257 7 26.34560003989323 32.307560182677754 22.02244825307822 19.3243915243508 8 26.55102247180117 34.72220875517885 19.181163746472983 19.545605026547005 9 24.678533979197343 14.58236082041536 21.572402749862523 39.166702450524774 10 16.70196571121457 26.872800158464777 33.773913428920096 22.651320701400557 11 33.41154992125242 22.514741795223063 23.221184413382517 20.852523870141994 12 20.99963015651167 26.793013698060886 30.858660224648755 21.34869592077869 13 30.8630928057823 20.884521565199808 26.034211215261376 22.21817441375652 14 20.657490300265817 22.768230028797927 27.414821720201626 29.15945795073463 15 23.336154486533957 29.14602168917356 24.99934203873799 22.518481785554496 16 22.307518627229623 27.95989068146779 26.427879827184743 23.30471086411784 17 22.017323081142553 26.68081398811791 27.059661156875976 24.242201773863563 18 22.876551230249042 25.589152365820922 29.068174483015596 22.466121920914443 19 23.005788673924094 25.16210087723551 29.84096730001787 21.991143148822527 20 23.810302149663332 24.764138202339016 29.662555909392502 21.76300373860515 21 22.746067123130178 25.574607958976465 29.971035852655465 21.7082890652379 22 21.85775016033477 25.969661752504063 29.506861497076574 22.665726590084592 23 22.366250327249155 26.090588106553707 30.429946518138262 21.113215048058876 24 22.599376391241773 26.341998567722218 28.296628329457135 22.76199671157887 25 22.550756516933152 26.1508435063379 29.248386609726467 22.05001336700248 26 22.258483198439734 26.863519441716406 29.260853244164576 21.617144115679285 27 21.649834401539213 26.820163257503875 28.87701942163127 22.652982919325638 28 21.79610957894635 26.452259023419266 29.200736362540813 22.550895035093575 29 22.16816935784366 26.533846219908664 28.752076040929346 22.545908381318334 30 21.972443197165365 26.661837000139904 30.02976755267499 21.335952250019737 31 22.395339140938074 26.362083700983618 29.897759745791475 21.344817412286837 32 21.93587440281358 26.225920349287396 29.05169082192521 22.786514425973817 33 21.812039167395042 26.233538848110683 29.60908789946906 22.34533408502522 34 21.43277644415571 26.457938267996628 30.005942429082168 22.103342858765497 35 21.090498069749433 27.887861238047613 29.195334154284296 21.826306537918654 36 22.68456505990218 26.10513251339817 29.056538957540027 22.153763469159625 37 21.838773172356763 26.43577536232888 29.12275063822242 22.602700827091937 38 21.694021694714287 25.414480965526987 30.25347438175882 22.638022957999908 39 21.152000132977435 25.389547696650773 30.930135595427238 22.528316574944558 40 20.489052217190935 25.96619879849348 30.623733424570627 22.921015559744962 41 21.311988608266486 24.918724469371554 30.7489538415934 23.020333080768555 42 20.301498627977622 26.596179392099202 30.284086895212397 22.818235084710782 43 20.53711801885786 26.331748223850887 29.70494246648207 23.426191290809182 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 46.0 1 84.5 2 123.0 3 366.5 4 610.0 5 610.0 6 924.5 7 1239.0 8 1362.0 9 1485.0 10 2172.5 11 2860.0 12 2860.0 13 5078.0 14 7296.0 15 11178.5 16 15061.0 17 14053.0 18 13045.0 19 13045.0 20 13987.0 21 14929.0 22 12194.5 23 9460.0 24 10756.0 25 12052.0 26 12052.0 27 13341.0 28 14630.0 29 15961.0 30 17292.0 31 19561.0 32 21830.0 33 21830.0 34 24175.5 35 26521.0 36 29227.5 37 31934.0 38 33991.0 39 36048.0 40 36048.0 41 37793.5 42 39539.0 43 42120.5 44 44702.0 45 46659.5 46 48617.0 47 48617.0 48 59498.5 49 70380.0 50 67419.0 51 64458.0 52 60279.0 53 56100.0 54 56100.0 55 50469.5 56 44839.0 57 39072.0 58 33305.0 59 29683.0 60 26061.0 61 26061.0 62 22985.5 63 19910.0 64 17566.5 65 15223.0 66 13035.5 67 10848.0 68 10848.0 69 9219.0 70 7590.0 71 6553.5 72 5517.0 73 4540.0 74 3563.0 75 3563.0 76 2843.0 77 2123.0 78 1682.0 79 1241.0 80 957.5 81 674.0 82 674.0 83 517.5 84 361.0 85 277.0 86 193.0 87 152.5 88 112.0 89 112.0 90 93.5 91 75.0 92 48.5 93 22.0 94 16.5 95 11.0 96 11.0 97 6.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 721927.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.95038016046088 #Duplication Level Percentage of deduplicated Percentage of total 1 85.6512319868362 51.34823918822657 2 8.10602332601049 9.71918359967785 3 2.2779185171103 4.096862432259474 4 1.0449447317617289 2.505793356631459 5 0.6052045304941699 1.8141120838979365 6 0.4233275715232718 1.5227189307134903 7 0.2958373170663129 1.2414891736643379 8 0.22811714613354778 1.0940567705460478 9 0.16589670362825762 0.8951013404893219 >10 1.0619323600438562 11.857831682947783 >50 0.08826857313798943 3.6235884703015095 >100 0.046444794986788045 5.190173243932299 >500 0.0025417549494359485 1.0359013403088917 >1k 0.001617480422368331 1.4628400847368142 >5k 6.932058953007132E-4 2.5921083016662183 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7148 0.9901278107066227 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6411 0.8880399264745604 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5153 0.7137840806618951 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2709 0.37524569658705104 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1407 0.1948950517157552 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1403 0.1943409790740615 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1373 0.19018543426135884 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1328 0.18395211704230482 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1259 0.1743943639730887 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1081 0.14973813141771952 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 776 0.10749009248857572 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 765 0.10596639272391806 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 756 0.10471972928010725 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 745 0.10319602951544962 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 725 0.10042566630698117 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 2.770363208468446E-4 0.0 10 1.385181604234223E-4 0.0 0.0 4.1555448127026696E-4 0.0 11 1.385181604234223E-4 0.0 0.0 9.696271229639562E-4 0.0 12 1.385181604234223E-4 0.0 0.0 0.0019392542459279124 0.0 13 1.385181604234223E-4 0.0 0.0 0.0019392542459279124 0.0 14 1.385181604234223E-4 0.0 0.0 0.002077772406351335 0.0 15 1.385181604234223E-4 0.0 0.0 0.002493326887621602 0.0 16 1.385181604234223E-4 0.0 0.0 0.003047399529315291 0.0 17 1.385181604234223E-4 0.0 0.0 0.004571099293972937 0.0 18 1.385181604234223E-4 0.0 0.0 0.004986653775243204 0.0 19 1.385181604234223E-4 0.0 0.0 0.006094799058630582 0.0 20 1.385181604234223E-4 0.0 0.0 0.008865162267099028 0.0 21 1.385181604234223E-4 0.0 0.0 0.015375515806999876 0.0 22 1.385181604234223E-4 0.0 0.0 0.023409569111558372 0.0 23 1.385181604234223E-4 0.0 0.0 0.030058440811882643 0.0 24 1.385181604234223E-4 0.0 0.0 0.03961619388109878 0.0 25 1.385181604234223E-4 0.0 0.0 0.04668062006269332 0.0 26 1.385181604234223E-4 0.0 0.0 0.0583161455382608 0.0 27 1.385181604234223E-4 0.0 0.0 0.1098449012157739 0.0 28 1.385181604234223E-4 0.0 0.0 0.21650388474180907 0.0 29 1.385181604234223E-4 0.0 0.0 0.36707312512206913 0.0 30 1.385181604234223E-4 0.0 0.0 0.5657081671692568 0.0 31 1.385181604234223E-4 0.0 0.0 0.867539238731894 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGTCG 55 1.9013882E-5 23.545454 21 ATTAGAC 60 3.7238147E-5 21.583334 3 GGTATCA 2390 0.0 21.364017 1 GACAGTA 45 0.0038244491 20.555557 7 GACCGTC 45 0.0038244491 20.555557 22 ACCGTCG 45 0.0038244491 20.555557 23 GGCGTCG 55 5.1405473E-4 20.181818 8 GTCGTCA 65 6.8975874E-5 19.923077 24 TAGTGTC 65 6.8975874E-5 19.923077 19 GTATAGA 75 9.257945E-6 19.733334 1 TACCCGA 145 7.2759576E-12 19.13793 11 TTCGCTA 155 1.8189894E-12 19.096775 26 GGGCGTC 70 1.2184004E-4 18.5 7 TATACTG 80 1.6153132E-5 18.5 5 TCTATAC 60 9.232278E-4 18.5 3 GGCTAAC 50 0.0070324107 18.499998 1 CGAAATT 115 6.395021E-8 17.695652 13 TTACCCG 160 3.45608E-11 17.34375 10 TGTGCGC 75 2.0659246E-4 17.266666 10 TCCTACA 75 2.0659246E-4 17.266666 2 >>END_MODULE