##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088634_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1904251 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.754574370710582 31.0 31.0 34.0 30.0 34.0 2 31.939542633822956 31.0 31.0 34.0 30.0 34.0 3 32.024590245718656 33.0 31.0 34.0 30.0 34.0 4 35.699803754862145 37.0 35.0 37.0 35.0 37.0 5 35.605385529533656 37.0 35.0 37.0 33.0 37.0 6 35.63762130097346 37.0 35.0 37.0 33.0 37.0 7 35.51268819078997 37.0 35.0 37.0 33.0 37.0 8 35.533629757841794 37.0 35.0 37.0 33.0 37.0 9 37.15994897731444 39.0 37.0 39.0 33.0 39.0 10 37.01757593930632 39.0 37.0 39.0 33.0 39.0 11 37.05994745440596 39.0 37.0 39.0 33.0 39.0 12 36.96121309638278 39.0 37.0 39.0 33.0 39.0 13 36.99942917188963 39.0 37.0 39.0 33.0 39.0 14 38.06273595235082 40.0 37.0 41.0 33.0 41.0 15 38.01988603393145 40.0 37.0 41.0 33.0 41.0 16 37.926537520526445 40.0 37.0 41.0 33.0 41.0 17 37.93265908748374 40.0 37.0 41.0 33.0 41.0 18 37.90672710687824 40.0 37.0 41.0 33.0 41.0 19 37.920695328504486 40.0 37.0 41.0 32.0 41.0 20 37.796964790881034 40.0 37.0 41.0 32.0 41.0 21 37.69147187004234 40.0 37.0 41.0 32.0 41.0 22 37.54339527719823 39.0 36.0 41.0 32.0 41.0 23 37.40750667847883 39.0 36.0 41.0 32.0 41.0 24 37.26543454618115 39.0 36.0 41.0 31.0 41.0 25 37.06912534114463 39.0 36.0 41.0 31.0 41.0 26 37.239371280361674 39.0 36.0 41.0 31.0 41.0 27 37.178827265943404 39.0 36.0 41.0 31.0 41.0 28 37.05858418874403 39.0 36.0 41.0 31.0 41.0 29 36.92413815195581 39.0 36.0 41.0 30.0 41.0 30 36.81293432430914 39.0 35.0 41.0 30.0 41.0 31 36.64439246716951 39.0 35.0 40.0 30.0 41.0 32 36.523314416009235 39.0 35.0 40.0 30.0 41.0 33 36.32464312740285 39.0 35.0 40.0 30.0 41.0 34 36.195425392976034 38.0 35.0 40.0 30.0 41.0 35 36.01542968862823 38.0 35.0 40.0 29.0 41.0 36 35.87928744687544 38.0 35.0 40.0 28.0 41.0 37 35.72493542080324 38.0 35.0 40.0 27.0 41.0 38 35.65351206327317 38.0 35.0 40.0 27.0 41.0 39 35.53096151715294 38.0 35.0 40.0 26.0 41.0 40 35.36604995875019 38.0 34.0 40.0 25.0 41.0 41 35.25010726001982 38.0 34.0 40.0 25.0 41.0 42 35.044112357036965 38.0 34.0 40.0 24.0 41.0 43 34.70018710768696 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 1.0 13 2.0 14 3.0 15 15.0 16 25.0 17 72.0 18 124.0 19 270.0 20 646.0 21 1285.0 22 2365.0 23 4097.0 24 6532.0 25 10237.0 26 14743.0 27 20686.0 28 28094.0 29 37091.0 30 47022.0 31 58332.0 32 72962.0 33 90279.0 34 112840.0 35 140618.0 36 184147.0 37 262730.0 38 371130.0 39 437900.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.99015781007861 20.85035008515159 13.338892824527859 23.820599280241943 2 19.01613810364285 22.424774885243597 35.10802935117272 23.451057659940837 3 19.762730858484517 24.703518601276826 31.596044849129655 23.937705691109 4 13.929728801507785 16.130541614524553 36.22395366997313 33.715775913994534 5 13.30969499293948 37.84401321044337 34.88557968461091 13.960712112006243 6 32.86751588944945 36.92727481828813 13.97000710515578 16.235202187106637 7 26.62112295070345 32.04819112606479 22.06494837077675 19.265737552455008 8 26.74783943923359 34.75224642129635 19.089132682613794 19.410781456856267 9 24.742221482357106 14.441583593759436 21.41393125170999 39.40226367217347 10 16.762338578265155 26.755769066157768 33.58664377752723 22.89524857804985 11 33.66520484957077 22.320376883089466 23.20308614778199 20.81133211955777 12 20.999647630485686 26.547130604106282 30.93252937769233 21.520692387715695 13 31.06654532411956 20.691337433983232 25.980818705097175 22.261298536800034 14 20.868362416509168 22.241605754703556 27.189115300451466 29.700916528335814 15 23.610070311109197 28.85638500386766 24.80786408934536 22.725680595677776 16 22.68540229202978 27.625559865795 26.171339807619898 23.517698034555316 17 22.23698451517158 26.5179852866035 26.73418577698003 24.510844421244887 18 23.110398786714565 25.521793082949674 28.734709867554226 22.633098262781534 19 23.393712278475896 24.808179173858907 29.467123819286428 22.33098472837877 20 23.95860629717406 24.649429093118503 29.228394786191526 22.163569823515914 21 23.075792004310355 25.45662310273173 29.46197743889855 22.005607454059366 22 22.22753197976527 25.698870579561202 29.1396459815434 22.933951459130125 23 22.766326497924904 25.827162490659056 30.0057082811037 21.40080273031234 24 22.899292162640325 25.986805310854503 27.99588919737997 23.118013329125205 25 22.971394002156227 25.743980179083536 28.82177822146345 22.462847597296783 26 22.63708933328642 26.41432248164764 28.95133047061548 21.99725771445046 27 22.099817723608915 26.409858784372435 28.52906470838141 22.96125878363724 28 22.232100705211653 26.20626167453765 28.817104467845887 22.744533152404802 29 22.58951157174133 26.16776884979974 28.348101169436173 22.894618409022762 30 22.278628185044933 26.234776823013352 29.587486103460105 21.899108888481614 31 22.765118673956323 25.877943611425174 29.56758326502126 21.78935444959724 32 22.379035116694176 25.662845916846045 28.77656359376994 23.18155537268984 33 22.239137592680798 25.85089885734601 29.254966913500375 22.65499663647282 34 21.86949094420851 25.98953604330522 29.652918654105996 22.48805435838028 35 21.652240172120166 27.464026538518294 28.74710319175361 22.13663009760793 36 23.010884594520363 25.697400185164664 28.89004653273124 22.40166868758373 37 22.060012046731234 26.014742804388707 28.858328025034513 23.066917123845542 38 21.989853228382184 25.030996439019855 29.995625576670303 22.983524755927657 39 21.49711356328551 24.89635032356554 30.643176766088082 22.963359347060866 40 20.94792125617894 25.56879318955327 30.296268716676533 23.187016837591262 41 21.875267493623475 24.496718132221016 30.364274457516366 23.26373991663914 42 20.506855451303426 26.225744400291767 30.013217795343156 23.25418235306165 43 21.051006406193302 25.801535616890842 29.360782795965445 23.78667518095041 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 102.0 1 218.0 2 334.0 3 895.5 4 1457.0 5 1457.0 6 2207.5 7 2958.0 8 3241.5 9 3525.0 10 5266.5 11 7008.0 12 7008.0 13 12423.5 14 17839.0 15 26815.0 16 35791.0 17 33575.5 18 31360.0 19 31360.0 20 33537.0 21 35714.0 22 29055.0 23 22396.0 24 25860.5 25 29325.0 26 29325.0 27 32922.5 28 36520.0 29 40850.5 30 45181.0 31 50472.0 32 55763.0 33 55763.0 34 62393.5 35 69024.0 36 76674.0 37 84324.0 38 90141.0 39 95958.0 40 95958.0 41 100232.0 42 104506.0 43 111721.0 44 118936.0 45 123667.0 46 128398.0 47 128398.0 48 155418.0 49 182438.0 50 175353.0 51 168268.0 52 158156.0 53 148044.0 54 148044.0 55 134995.5 56 121947.0 57 105990.5 58 90034.0 59 81013.0 60 71992.0 61 71992.0 62 64640.5 63 57289.0 64 49960.0 65 42631.0 66 36802.5 67 30974.0 68 30974.0 69 26861.5 70 22749.0 71 19457.0 72 16165.0 73 13399.5 74 10634.0 75 10634.0 76 8577.5 77 6521.0 78 5144.5 79 3768.0 80 2955.0 81 2142.0 82 2142.0 83 1625.5 84 1109.0 85 822.0 86 535.0 87 417.5 88 300.0 89 300.0 90 246.5 91 193.0 92 125.5 93 58.0 94 40.0 95 22.0 96 22.0 97 16.5 98 11.0 99 9.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1904251.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.56989926656964 #Duplication Level Percentage of deduplicated Percentage of total 1 81.1745151918888 41.86161571458332 2 10.505800789317055 10.835661768394566 3 3.222383662068478 4.985340025533336 4 1.3972556674509375 2.882253360803535 5 0.8232300656808692 2.1226945780186965 6 0.517357684213123 1.6008050195793901 7 0.35987114347831656 1.2990963032685412 8 0.2575276419396528 1.0624539642548085 9 0.21046787424728697 0.9768426366403473 >10 1.3216917076477925 12.955385260308638 >50 0.12247228136054818 4.385548814572643 >100 0.07814371775647083 7.619901443313516 >500 0.006324390361987949 2.1504737659081705 >1k 0.002550157404027399 2.511235729866053 >5k 1.0200629616109596E-4 0.35255565506645203 >10k+ 3.0601888848328783E-4 2.398135959888006 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 17040 0.8948400184639524 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15879 0.8338711650932572 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12669 0.665300950347407 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6702 0.3519494016282517 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3683 0.19340937723020757 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3673 0.1928842363743015 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3643 0.19130881380658327 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3204 0.16825513023230657 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3027 0.15896013708276904 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2687 0.14110534798196245 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1953 0.10256000915845652 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 5.251408559060754E-5 0.0 5 5.251408559060754E-5 0.0 0.0 5.251408559060754E-5 0.0 6 1.0502817118121507E-4 0.0 0.0 5.251408559060754E-5 0.0 7 1.0502817118121507E-4 0.0 0.0 5.251408559060754E-5 0.0 8 1.0502817118121507E-4 0.0 0.0 5.251408559060754E-5 0.0 9 1.0502817118121507E-4 0.0 0.0 2.625704279530377E-4 0.0 10 2.1005634236243015E-4 0.0 0.0 3.675985991342528E-4 0.0 11 2.625704279530377E-4 5.251408559060754E-5 0.0 6.826831126778981E-4 0.0 12 2.625704279530377E-4 5.251408559060754E-5 0.0 0.0013653662253557961 0.0 13 3.1508451354364525E-4 5.251408559060754E-5 0.0 0.0015754225677182263 0.0 14 3.1508451354364525E-4 5.251408559060754E-5 0.0 0.0018379929956712639 0.0 15 3.675985991342528E-4 5.251408559060754E-5 0.0 0.002153077509214909 0.0 16 4.201126847248603E-4 5.251408559060754E-5 0.0 0.00299330287866463 0.0 17 4.7262677031546785E-4 5.251408559060754E-5 0.0 0.003991070504886173 0.0 18 4.7262677031546785E-4 5.251408559060754E-5 0.0 0.004883809959926501 0.0 19 4.7262677031546785E-4 5.251408559060754E-5 0.0 0.006091633928510475 0.0 20 4.7262677031546785E-4 5.251408559060754E-5 0.0 0.009925162176624825 0.0 21 4.7262677031546785E-4 5.251408559060754E-5 0.0 0.015229084821276186 0.0 22 4.7262677031546785E-4 1.0502817118121507E-4 0.0 0.02520676108349162 0.0 23 4.7262677031546785E-4 1.0502817118121507E-4 0.0 0.031455937268773916 0.0 24 4.7262677031546785E-4 1.0502817118121507E-4 0.0 0.04232635298602968 0.0 25 4.7262677031546785E-4 1.0502817118121507E-4 0.0 0.049468268626352306 0.0 26 4.7262677031546785E-4 1.0502817118121507E-4 0.0 0.06002359983006442 0.0 27 6.301690270872905E-4 1.0502817118121507E-4 0.0 0.10760136137515484 0.0 28 6.301690270872905E-4 1.0502817118121507E-4 0.0 0.2291714695174113 0.0 29 6.301690270872905E-4 1.0502817118121507E-4 0.0 0.3727974936077229 0.0 30 6.826831126778981E-4 1.0502817118121507E-4 0.0 0.5676247511488769 0.0 31 7.351971982685056E-4 1.0502817118121507E-4 0.0 0.8768276871063742 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5240 0.0 21.571564 1 TTAGTAC 70 1.21973135E-4 18.5 3 CTAATAC 495 0.0 17.565657 3 GTATTAG 485 0.0 17.546392 1 CGGGTAA 220 0.0 16.818182 26 ATTAGAG 420 0.0 16.738094 3 TTAACGG 355 0.0 16.676056 35 TCTAATA 505 0.0 16.48515 2 GTTCCGA 215 0.0 16.348837 33 ACGTTCG 210 0.0 15.857142 22 TCGGGTA 245 0.0 15.857142 25 ACAGCGT 105 9.3494655E-6 15.857142 8 TAACGGC 380 0.0 15.578948 36 GTACCGT 155 7.215931E-9 15.516129 6 TAGCGAA 275 0.0 15.472727 10 TACTGGT 480 0.0 15.416667 7 ACCGTCC 85 5.36645E-4 15.235293 8 TAATACT 550 0.0 15.136363 4 GGTAAAC 410 0.0 14.890244 35 TTCGTTA 200 6.184564E-11 14.8 30 >>END_MODULE