##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088632_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3722592 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.63610382228297 31.0 31.0 34.0 30.0 34.0 2 31.822368124145758 31.0 31.0 34.0 30.0 34.0 3 31.900846238319968 31.0 31.0 34.0 30.0 34.0 4 35.59482022203884 37.0 35.0 37.0 33.0 37.0 5 35.49588405068297 37.0 35.0 37.0 33.0 37.0 6 35.534057452441736 37.0 35.0 37.0 33.0 37.0 7 35.40837862435636 37.0 35.0 37.0 33.0 37.0 8 35.43054919797818 37.0 35.0 37.0 33.0 37.0 9 37.03252330634139 39.0 37.0 39.0 33.0 39.0 10 36.881941131340746 39.0 37.0 39.0 33.0 39.0 11 36.930031279280676 39.0 37.0 39.0 33.0 39.0 12 36.83074857518632 39.0 37.0 39.0 32.0 39.0 13 36.87893704171717 39.0 37.0 39.0 33.0 39.0 14 37.910317864541696 40.0 37.0 41.0 33.0 41.0 15 37.86885374491752 40.0 37.0 41.0 33.0 41.0 16 37.764297564707604 40.0 37.0 41.0 32.0 41.0 17 37.77882453946068 40.0 37.0 41.0 32.0 41.0 18 37.748176807987555 40.0 37.0 41.0 32.0 41.0 19 37.772387358055894 40.0 37.0 41.0 32.0 41.0 20 37.65077021602153 39.0 37.0 41.0 32.0 41.0 21 37.54485691690091 39.0 37.0 41.0 32.0 41.0 22 37.3908537384704 39.0 36.0 41.0 32.0 41.0 23 37.2543794753763 39.0 36.0 41.0 31.0 41.0 24 37.12287030112352 39.0 36.0 41.0 31.0 41.0 25 36.91406176126742 39.0 36.0 40.0 30.0 41.0 26 37.070065158900036 39.0 36.0 41.0 31.0 41.0 27 37.00276581478712 39.0 36.0 41.0 31.0 41.0 28 36.88403107297281 39.0 36.0 41.0 30.0 41.0 29 36.7432033916153 39.0 35.0 40.0 30.0 41.0 30 36.62666711796512 39.0 35.0 40.0 30.0 41.0 31 36.45120631001195 39.0 35.0 40.0 30.0 41.0 32 36.32336044347594 38.0 35.0 40.0 30.0 41.0 33 36.128084410002494 38.0 35.0 40.0 30.0 41.0 34 35.99575000429808 38.0 35.0 40.0 29.0 41.0 35 35.80834429343855 38.0 35.0 40.0 28.0 41.0 36 35.66687512356982 38.0 35.0 40.0 27.0 41.0 37 35.510705981208794 38.0 34.0 40.0 27.0 41.0 38 35.426107669065 38.0 34.0 40.0 26.0 41.0 39 35.29424390317284 38.0 34.0 40.0 25.0 41.0 40 35.117054192347695 38.0 34.0 40.0 24.0 41.0 41 34.98909926201958 38.0 34.0 40.0 24.0 41.0 42 34.78186247646801 38.0 33.0 40.0 23.0 41.0 43 34.42864353654658 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 2.0 12 5.0 13 4.0 14 16.0 15 28.0 16 66.0 17 125.0 18 338.0 19 702.0 20 1429.0 21 2925.0 22 5313.0 23 8892.0 24 14537.0 25 21737.0 26 31562.0 27 44104.0 28 59963.0 29 77845.0 30 98357.0 31 121315.0 32 149341.0 33 184762.0 34 227734.0 35 283927.0 36 369920.0 37 521046.0 38 732775.0 39 763819.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.54607864627658 21.24946811254094 13.705907066903922 23.498546174278566 2 19.37297990217569 22.96848539942062 34.54611732900087 23.112417369402824 3 20.196787614651296 24.6007889126716 31.689451865796737 23.512971606880367 4 14.344118291770897 16.4069551538283 35.82205624468113 33.42687030971968 5 13.359481780436857 38.076936715063056 34.62060843627236 13.94297306822773 6 32.91910582733751 36.74305430194875 13.901953262672889 16.435886608040846 7 26.653793915637277 32.17142786531535 21.794384128048414 19.38039409099896 8 26.815240563564313 34.48798579054594 19.110017965976393 19.586755679913352 9 24.77061681752929 14.456351918233318 21.541307776946816 39.23172348729057 10 16.831068244921816 27.040459980572678 33.516377835658595 22.61209393884691 11 33.669362637646024 22.29650737980418 23.135922497012835 20.89820748553696 12 20.98543165622233 26.7495605212712 30.72539241474757 21.539615407758895 13 31.107867851217648 20.626434484359287 26.090691647110397 22.17500601731267 14 20.79217921276358 22.464025066405345 27.330661001796596 29.413134719034478 15 23.569437639150355 29.00108311628027 24.941008845449623 22.488470399119752 16 22.455590083468724 27.676656480215932 26.36259896330299 23.50515447301235 17 22.1490832194342 26.53833672881691 27.009540664139397 24.303039387609495 18 22.98594635135948 25.489712544377678 29.000196637181837 22.524144467081 19 23.213126767585596 24.87841804849954 29.773072096001922 22.13538308791294 20 23.84198966741453 24.67036409039723 29.63212191935082 21.85552432283742 21 22.95943256741539 25.415678108156897 29.840766863518752 21.784122460908957 22 22.04885735530512 25.72446832744496 29.4668875880032 22.759786729246716 23 22.570563736235396 25.881831798918604 30.334804351376675 21.212800113469324 24 22.703723642021473 26.11188655646388 28.17539499359586 23.008994807918786 25 22.852571541549544 25.89330230119229 29.085513534655423 22.168612622602744 26 22.450808468937772 26.53336707326508 29.221735822781547 21.7940886350156 27 21.825222855472745 26.502420893828816 28.805198098529196 22.867158152169242 28 21.970444249598128 26.22876748244234 29.277772047003808 22.52301622095572 29 22.328716120380637 26.259310716833863 28.720982584177907 22.690990578607597 30 22.17763859160499 26.293158100592272 29.939300358459914 21.589902949342825 31 22.662462069439787 25.935826434914166 29.758592937394155 21.643118558251885 32 22.070535798712296 25.913422690426458 29.06055780488434 22.955483705976913 33 21.975091549114165 25.931770121463753 29.565931480001034 22.52720684942105 34 21.58976863432791 26.160374276847957 29.95208714787976 22.297769940944374 35 21.43493028513466 27.62687933568868 28.99450168054947 21.94368869862719 36 22.900629453885895 25.834526050665772 29.014326576750822 22.25051791869751 37 21.909868177871765 26.07916741883075 29.142006429928397 22.868957973369096 38 21.853214104580896 25.0489175284318 30.327981148619028 22.769887218368275 39 21.233968159819824 25.054827389088036 30.905267082720854 22.805937368371286 40 20.68435111879035 25.70499265028238 30.584684005123314 23.025972225803955 41 21.489086099148118 24.678584169309985 30.733263274621553 23.09906645692034 42 20.42359194883565 26.32907393558037 30.17891834506709 23.068415770516886 43 20.732973154189338 25.93426838074116 29.68600910333445 23.64674936173505 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 199.0 1 434.5 2 670.0 3 1745.0 4 2820.0 5 2820.0 6 4576.5 7 6333.0 8 7003.5 9 7674.0 10 11107.0 11 14540.0 12 14540.0 13 26438.0 14 38336.0 15 58413.5 16 78491.0 17 72042.5 18 65594.0 19 65594.0 20 70884.5 21 76175.0 22 61330.0 23 46485.0 24 52258.0 25 58031.0 26 58031.0 27 63865.5 28 69700.0 29 77602.5 30 85505.0 31 95497.0 32 105489.0 33 105489.0 34 119071.0 35 132653.0 36 146386.5 37 160120.0 38 173149.5 39 186179.0 40 186179.0 41 194714.0 42 203249.0 43 219275.0 44 235301.0 45 245888.0 46 256475.0 47 256475.0 48 309253.0 49 362031.0 50 345694.5 51 329358.0 52 308609.5 53 287861.0 54 287861.0 55 260739.0 56 233617.0 57 203791.0 58 173965.0 59 155988.5 60 138012.0 61 138012.0 62 123311.0 63 108610.0 64 94682.5 65 80755.0 66 69483.5 67 58212.0 68 58212.0 69 50532.0 70 42852.0 71 36375.0 72 29898.0 73 24735.5 74 19573.0 75 19573.0 76 15705.5 77 11838.0 78 9450.0 79 7062.0 80 5626.5 81 4191.0 82 4191.0 83 3154.5 84 2118.0 85 1638.5 86 1159.0 87 925.0 88 691.0 89 691.0 90 591.5 91 492.0 92 330.0 93 168.0 94 121.5 95 75.0 96 75.0 97 49.5 98 24.0 99 17.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3722592.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.52238752670709 #Duplication Level Percentage of deduplicated Percentage of total 1 77.34049619234872 34.43383542983564 2 12.014818935465707 10.698568494160453 3 4.117205813643238 5.499234982867069 4 1.8729009452538785 3.3354408673491687 5 1.0369648527522568 2.3084075512905367 6 0.6703934359047958 1.7908509809228392 7 0.4615746872418621 1.4385284968530567 8 0.3330925661477619 1.1864061049836778 9 0.2539434418472568 1.0175551495010438 >10 1.6163699147707082 13.744877114009322 >50 0.16194750499311966 5.021090648733948 >100 0.10575955245032308 9.067991274464053 >500 0.009385351514654205 2.907484711783782 >1k 0.004541299116965227 3.5051298521243273 >5k 3.633039293572181E-4 1.0536228552025095 >10k+ 2.4220261957147874E-4 2.990975485918502 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37319 1.0025004083176454 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 33192 0.8916367950073497 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25750 0.6917223268088472 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14686 0.39451006180639725 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7356 0.1976042499419759 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6977 0.187423171811469 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6837 0.1836623513938675 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6574 0.17659738160937327 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6200 0.16655061849378067 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5139 0.13804897232895788 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4129 0.11091733931626135 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3820 0.1026166713945552 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3771 0.10130038424839467 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 2.6863002982867852E-5 0.0 4 0.0 0.0 0.0 2.6863002982867852E-5 0.0 5 2.6863002982867852E-5 0.0 0.0 2.6863002982867852E-5 0.0 6 5.3726005965735705E-5 0.0 0.0 2.6863002982867852E-5 0.0 7 5.3726005965735705E-5 0.0 0.0 2.6863002982867852E-5 0.0 8 5.3726005965735705E-5 0.0 0.0 2.6863002982867852E-5 0.0 9 8.058900894860356E-5 0.0 0.0 1.6117801789720712E-4 0.0 10 1.6117801789720712E-4 0.0 0.0 2.9549303281154637E-4 0.0 11 1.6117801789720712E-4 0.0 0.0 5.641230626402249E-4 0.0 12 1.6117801789720712E-4 0.0 0.0 9.402051044003748E-4 0.0 13 1.6117801789720712E-4 0.0 0.0 0.0010476571163318463 0.0 14 1.8804102088007497E-4 0.0 0.0 0.0011819721312461855 0.0 15 2.1490402386294282E-4 0.0 0.0 0.0017460951938864104 0.0 16 2.1490402386294282E-4 0.0 0.0 0.002310218256526635 0.0 17 2.1490402386294282E-4 0.0 0.0 0.0033310123698756136 0.0 18 2.1490402386294282E-4 0.0 0.0 0.003975724441464442 0.0 19 2.686300298286785E-4 0.0 0.0 0.004942792548847685 0.0 20 2.686300298286785E-4 0.0 0.0 0.008488708942586241 0.0 21 2.9549303281154637E-4 0.0 0.0 0.014183665574954225 0.0 22 3.2235603579441424E-4 0.0 0.0 0.023075319562283484 0.0 23 3.2235603579441424E-4 0.0 0.0 0.0294955772751889 0.0 24 3.2235603579441424E-4 0.0 0.0 0.03943488837885001 0.0 25 3.2235603579441424E-4 0.0 0.0 0.0467953511961558 0.0 26 3.4921903877728206E-4 0.0 0.0 0.05853448349966905 0.0 27 3.4921903877728206E-4 0.0 0.0 0.10925183313132356 0.0 28 3.4921903877728206E-4 0.0 0.0 0.22454784193379237 0.0 29 3.4921903877728206E-4 0.0 0.0 0.3718645502918397 0.0 30 3.4921903877728206E-4 0.0 0.0 0.5751637568661836 0.0 31 3.4921903877728206E-4 0.0 0.0 0.8914756169894525 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11845 0.0 20.819334 1 TAATACT 1100 0.0 17.322727 4 CTAATAC 1025 0.0 16.604877 3 TCTAATA 1020 0.0 15.960784 2 GTATTGG 1605 0.0 15.560748 1 AATACTG 1165 0.0 15.403434 5 TCGGTAC 85 5.368158E-4 15.235294 3 GCTAGAG 900 0.0 15.005556 17 ATACTGG 995 0.0 14.874372 6 CTCTAAT 940 0.0 14.760639 1 TTGGACC 2335 0.0 14.498929 4 TGCTAGA 940 0.0 14.170214 16 TACTGGT 1045 0.0 14.16268 7 GTATCAA 17600 0.0 14.053694 2 ATTGGAC 1950 0.0 14.041027 3 GTATTAG 1000 0.0 13.875 1 CGTATAC 190 7.1413524E-9 13.631579 3 TGGACCC 2205 0.0 13.591837 5 GGTAAAC 900 0.0 13.566667 35 GATGCTA 1035 0.0 13.227053 14 >>END_MODULE