##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088627_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1269713 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.72470786705342 31.0 31.0 34.0 30.0 34.0 2 31.91478231694879 31.0 31.0 34.0 30.0 34.0 3 31.98734123380638 33.0 31.0 34.0 30.0 34.0 4 35.670839788204106 37.0 35.0 37.0 33.0 37.0 5 35.58454075842336 37.0 35.0 37.0 33.0 37.0 6 35.61903280505122 37.0 35.0 37.0 33.0 37.0 7 35.4942353114444 37.0 35.0 37.0 33.0 37.0 8 35.51649152209988 37.0 35.0 37.0 33.0 37.0 9 37.128912596783685 39.0 37.0 39.0 33.0 39.0 10 36.991158631911304 39.0 37.0 39.0 33.0 39.0 11 37.04282227558511 39.0 37.0 39.0 33.0 39.0 12 36.94132217280598 39.0 37.0 39.0 33.0 39.0 13 36.98613466192754 39.0 37.0 39.0 33.0 39.0 14 38.0252159346246 40.0 37.0 41.0 33.0 41.0 15 37.983478943666796 40.0 37.0 41.0 33.0 41.0 16 37.88674842267505 40.0 37.0 41.0 33.0 41.0 17 37.919183311504256 40.0 37.0 41.0 33.0 41.0 18 37.896239543896925 40.0 37.0 41.0 33.0 41.0 19 37.92138459636154 40.0 37.0 41.0 32.0 41.0 20 37.798709629656464 40.0 37.0 41.0 32.0 41.0 21 37.705770516644314 40.0 37.0 41.0 32.0 41.0 22 37.553813342070214 39.0 36.0 41.0 32.0 41.0 23 37.4246471446697 39.0 36.0 41.0 32.0 41.0 24 37.28324274855814 39.0 36.0 41.0 31.0 41.0 25 37.08539488845117 39.0 36.0 41.0 31.0 41.0 26 37.247256663513724 39.0 36.0 41.0 31.0 41.0 27 37.18463463790636 39.0 36.0 41.0 31.0 41.0 28 37.07088767304107 39.0 36.0 41.0 31.0 41.0 29 36.92713628985448 39.0 36.0 41.0 30.0 41.0 30 36.80423607539657 39.0 35.0 41.0 30.0 41.0 31 36.61667715460108 39.0 35.0 40.0 30.0 41.0 32 36.50202998630399 39.0 35.0 40.0 30.0 41.0 33 36.30935967419409 38.0 35.0 40.0 30.0 41.0 34 36.17679900890989 38.0 35.0 40.0 30.0 41.0 35 35.99244947480258 38.0 35.0 40.0 29.0 41.0 36 35.84807196586945 38.0 35.0 40.0 28.0 41.0 37 35.68654491211794 38.0 35.0 40.0 27.0 41.0 38 35.609965401630134 38.0 35.0 40.0 27.0 41.0 39 35.48014866351687 38.0 35.0 40.0 26.0 41.0 40 35.30024186568146 38.0 34.0 40.0 25.0 41.0 41 35.168035611197176 38.0 34.0 40.0 24.0 41.0 42 34.95317366995533 38.0 34.0 40.0 24.0 41.0 43 34.59625521673008 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 1.0 14 2.0 15 8.0 16 8.0 17 45.0 18 84.0 19 185.0 20 403.0 21 802.0 22 1512.0 23 2703.0 24 4264.0 25 6628.0 26 9792.0 27 13783.0 28 19013.0 29 24868.0 30 31702.0 31 39195.0 32 48596.0 33 60948.0 34 76075.0 35 95409.0 36 124741.0 37 178047.0 38 247023.0 39 283873.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.61609749604832 21.148558768792633 13.846908710866156 23.388435024292892 2 19.169922651811866 22.72041004541971 35.13132495296181 22.97834234980661 3 19.877011576631883 24.445996851256936 32.28501243981908 23.3919791322921 4 13.95890252364117 16.254460653706783 36.066339401108756 33.72029742154329 5 13.106977718586798 38.04938596359965 34.91922977869802 13.924406539115534 6 32.610597828013105 36.904954111677206 13.753974323331336 16.730473736978357 7 26.256563491119643 32.53002843949774 21.74389015470425 19.469517914678356 8 26.671617916804824 34.69287941448185 19.045327566150778 19.590175102562547 9 24.516879011241123 14.48941611214503 21.72687843630805 39.2668264403058 10 16.846484205485808 26.978301395669728 33.45937231484595 22.71584208399851 11 33.33005175185259 22.37482013651904 23.282820605916456 21.01230750571192 12 20.999784990781382 26.92135939381577 30.71851670416858 21.360338911234273 13 31.235562682275443 20.745711826215846 26.24002432045667 21.778701171052038 14 20.521015379065975 22.7975140838914 27.432971072990508 29.248499464052113 15 23.31259111310981 29.168402623269984 25.136704121325053 22.38230214229515 16 22.28078313760669 27.884332916178696 26.465350831250838 23.369533114963776 17 21.93062526728481 26.591836107844845 26.914979999417195 24.562558625453153 18 23.036386963038105 25.371166554961633 29.166906222114765 22.4255402598855 19 23.141607591636852 24.751420202833238 29.960707655982098 22.146264549547812 20 23.888311768092475 24.52837767274967 29.84674489431864 21.73656566483922 21 22.965504803053918 25.233261374814624 30.237620627653648 21.563613194477806 22 21.752632287768968 25.615158701218306 29.88297355386611 22.749235457146614 23 22.522176271330608 25.80772190250868 30.841300356852297 20.82880146930842 24 22.595657443847546 25.93893265643496 28.51148251612766 22.953927383589836 25 22.616843333887264 25.883172023914064 29.47036062480261 22.029624017396056 26 22.348830011191506 26.478109620047995 29.51816670381417 21.654893664946332 27 21.47753074907479 26.656181357519376 29.131622658033745 22.734665235372088 28 21.80957428962293 26.25483081609781 29.39191770108678 22.543677193192476 29 22.087117324938784 26.3093313213301 28.909603981372168 22.69394737235895 30 22.03112041855128 26.267904636717116 30.235179131031977 21.465795813699632 31 22.431210832684236 25.892622978578622 30.32078902870176 21.355377160035378 32 22.098852260313944 25.792836648911997 29.285988250888195 22.822322839885864 33 21.785710629094922 25.975948895537808 29.91542183154776 22.32291864381951 34 21.293000859249293 26.39509873491096 30.235966710587352 22.07593369525239 35 21.037037503750845 28.028853764590895 29.315680000126015 21.618428731532244 36 22.7185198544868 25.887818743290808 29.418852921880774 21.974808480341622 37 21.798075628114386 26.38832555073469 29.33064401167823 22.48295480947269 38 21.77247929256454 25.12118880408407 30.66653645351351 22.439795449837877 39 21.1700596906545 25.18584908558076 31.16846090415708 22.47563031960766 40 20.397759178649032 25.76826416678415 30.851381375161157 22.98259527940566 41 21.454297152191085 24.710229792086874 30.953687959405002 22.881785096317042 42 20.20180938527053 26.64554903352175 30.430498860766175 22.72214272044155 43 20.606073971047 26.319176065772343 29.664105195426053 23.4106447677546 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 78.0 1 155.0 2 232.0 3 606.0 4 980.0 5 980.0 6 1554.5 7 2129.0 8 2353.0 9 2577.0 10 3761.0 11 4945.0 12 4945.0 13 9180.5 14 13416.0 15 20677.0 16 27938.0 17 25629.5 18 23321.0 19 23321.0 20 25511.0 21 27701.0 22 21918.0 23 16135.0 24 18308.0 25 20481.0 26 20481.0 27 22586.5 28 24692.0 29 27260.5 30 29829.0 31 32949.0 32 36069.0 33 36069.0 34 40429.5 35 44790.0 36 49278.0 37 53766.0 38 57837.0 39 61908.0 40 61908.0 41 64962.0 42 68016.0 43 73276.5 44 78537.0 45 82830.0 46 87123.0 47 87123.0 48 108036.0 49 128949.0 50 122587.0 51 116225.0 52 108598.0 53 100971.0 54 100971.0 55 90557.0 56 80143.0 57 69025.5 58 57908.0 59 51783.0 60 45658.0 61 45658.0 62 40504.0 63 35350.0 64 30608.5 65 25867.0 66 22104.0 67 18341.0 68 18341.0 69 15811.0 70 13281.0 71 11227.0 72 9173.0 73 7439.0 74 5705.0 75 5705.0 76 4562.5 77 3420.0 78 2633.0 79 1846.0 80 1446.0 81 1046.0 82 1046.0 83 791.5 84 537.0 85 414.5 86 292.0 87 234.5 88 177.0 89 177.0 90 141.5 91 106.0 92 69.0 93 32.0 94 25.5 95 19.0 96 19.0 97 10.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1269713.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.52134329394056 #Duplication Level Percentage of deduplicated Percentage of total 1 82.57196963630008 43.36790763724952 2 9.700015325563857 10.189156697408478 3 2.850436099370514 4.491261987374389 4 1.325984592541402 2.785699679493715 5 0.7543623973035499 1.9810063218409861 6 0.48002784354419054 1.5127024296860656 7 0.3574807938540741 1.3142760046500157 8 0.2513911344360425 1.0562720058214843 9 0.21170012158221208 1.0006897284889484 >10 1.2861200734427782 12.826752668050545 >50 0.12513714292711117 4.566873377520988 >100 0.07695760812530575 7.380442943843615 >500 0.005110461683981752 1.7643899365475884 >1k 0.002705538538578574 2.5130912411658133 >5k 3.0061539317539714E-4 1.1764967885623585 >10k+ 3.0061539317539714E-4 2.0729805522954416 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13527 1.0653588645623067 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12732 1.0027462899096096 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9745 0.767496276717652 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5158 0.40623353466492035 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3007 0.23682517230271724 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2936 0.23123335745952037 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2811 0.22138861301727242 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2678 0.21091380493072054 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2651 0.208787340131195 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2157 0.16988091009543102 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1620 0.12758788797153373 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1519 0.11963333446219737 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1497 0.11790065944036172 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1411 0.11112747526409511 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1304 0.10270037402153084 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1294 0.10191279446615101 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.5751591107596757E-4 0.0 10 0.0 0.0 0.0 2.3627386661395134E-4 0.0 11 0.0 0.0 0.0 6.300636443038703E-4 0.0 12 0.0 0.0 0.0 0.001496401155221692 0.0 13 0.0 0.0 0.0 0.0015751591107596755 0.0 14 7.875795553798379E-5 0.0 0.0 0.0017326750218356432 0.0 15 1.5751591107596757E-4 0.0 0.0 0.002126464799525562 0.0 16 1.5751591107596757E-4 0.0 0.0 0.0030715602659813672 0.0 17 1.5751591107596757E-4 0.0 0.0 0.004095413687975157 0.0 18 1.5751591107596757E-4 0.0 0.0 0.004725477332279027 0.0 19 1.5751591107596757E-4 0.0 0.0 0.005434298932120881 0.0 20 1.5751591107596757E-4 0.0 0.0 0.00937219670902007 0.0 21 1.5751591107596757E-4 0.0 0.0 0.016145380885286675 0.0 22 1.5751591107596757E-4 0.0 0.0 0.026856462838452468 0.0 23 1.5751591107596757E-4 0.0 0.0 0.03339337314810512 0.0 24 1.5751591107596757E-4 0.0 0.0 0.04394693919019495 0.0 25 1.5751591107596757E-4 0.0 0.0 0.05016881767769567 7.875795553798379E-5 26 2.3627386661395134E-4 0.0 0.0 0.06001356211994364 7.875795553798379E-5 27 3.1503182215193514E-4 0.0 0.0 0.11207257073055092 7.875795553798379E-5 28 3.1503182215193514E-4 0.0 0.0 0.2340686438588878 7.875795553798379E-5 29 3.1503182215193514E-4 0.0 0.0 0.3874891412468802 7.875795553798379E-5 30 3.1503182215193514E-4 0.0 0.0 0.5941500165785496 7.875795553798379E-5 31 3.1503182215193514E-4 0.0 0.0 0.8956354703779515 7.875795553798379E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4480 0.0 22.877232 1 TTATACC 115 5.456968E-12 22.521738 4 AGTACCG 140 9.458745E-11 18.5 5 TCGGGTA 155 2.1827873E-11 17.903227 25 CGTAAGG 125 8.580173E-9 17.76 3 TTAACGG 205 0.0 17.146343 35 CCGTTTA 240 0.0 16.958332 27 ACCTAAG 90 4.4465458E-5 16.444445 1 CTAATAC 315 0.0 16.444445 3 CTATCCT 160 6.2937033E-10 16.1875 4 TCTAACG 80 3.3829155E-4 16.1875 2 AGTTCCG 160 6.2937033E-10 16.1875 32 CGGGTAA 195 1.8189894E-12 16.128206 26 CGTTTAC 255 0.0 15.960784 28 GTATTGG 595 0.0 15.857142 1 GTATTAG 350 0.0 15.857142 1 ATTACAC 70 0.002592694 15.857142 3 TCTAATA 280 0.0 15.857142 2 TACCGTG 140 3.473542E-8 15.857142 7 GTAAGGT 130 2.589386E-7 15.653846 4 >>END_MODULE