##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088626_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1804527 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.684182059897136 31.0 31.0 34.0 30.0 34.0 2 31.866352235239482 31.0 31.0 34.0 30.0 34.0 3 31.948460732369202 31.0 31.0 34.0 30.0 34.0 4 35.630014402666184 37.0 35.0 37.0 33.0 37.0 5 35.53752922510996 37.0 35.0 37.0 33.0 37.0 6 35.57134085552613 37.0 35.0 37.0 33.0 37.0 7 35.434122071878114 37.0 35.0 37.0 33.0 37.0 8 35.46036773071281 37.0 35.0 37.0 33.0 37.0 9 37.062812027750205 39.0 37.0 39.0 33.0 39.0 10 36.931638595598734 39.0 37.0 39.0 33.0 39.0 11 36.96759981978657 39.0 37.0 39.0 33.0 39.0 12 36.87167828466961 39.0 37.0 39.0 33.0 39.0 13 36.92038578530551 39.0 37.0 39.0 33.0 39.0 14 37.95023571273802 40.0 37.0 41.0 33.0 41.0 15 37.907488222675525 40.0 37.0 41.0 33.0 41.0 16 37.80371698511577 40.0 37.0 41.0 32.0 41.0 17 37.83748982420324 40.0 37.0 41.0 32.0 41.0 18 37.81129403993401 40.0 37.0 41.0 32.0 41.0 19 37.829098151482356 40.0 37.0 41.0 32.0 41.0 20 37.71185357714238 40.0 37.0 41.0 32.0 41.0 21 37.61370043230165 39.0 37.0 41.0 32.0 41.0 22 37.45703112228301 39.0 36.0 41.0 32.0 41.0 23 37.31837428866401 39.0 36.0 41.0 31.0 41.0 24 37.171102455103195 39.0 36.0 41.0 31.0 41.0 25 36.97232127865086 39.0 36.0 41.0 31.0 41.0 26 37.12948767183866 39.0 36.0 41.0 31.0 41.0 27 37.05731418815014 39.0 36.0 41.0 31.0 41.0 28 36.93641879561791 39.0 36.0 41.0 31.0 41.0 29 36.78986293915248 39.0 35.0 41.0 30.0 41.0 30 36.664232233709996 39.0 35.0 40.0 30.0 41.0 31 36.47976561170877 39.0 35.0 40.0 30.0 41.0 32 36.35625845443155 38.0 35.0 40.0 30.0 41.0 33 36.14685787466743 38.0 35.0 40.0 30.0 41.0 34 36.003969461249405 38.0 35.0 40.0 29.0 41.0 35 35.81126854848944 38.0 35.0 40.0 28.0 41.0 36 35.68056837054807 38.0 35.0 40.0 27.0 41.0 37 35.505267585356165 38.0 34.0 40.0 26.0 41.0 38 35.42127050468073 38.0 34.0 40.0 26.0 41.0 39 35.28032387434491 38.0 34.0 40.0 25.0 41.0 40 35.10745253465313 38.0 34.0 40.0 24.0 41.0 41 34.980954565933345 38.0 34.0 40.0 24.0 41.0 42 34.7600839444353 38.0 33.0 40.0 23.0 41.0 43 34.403363873192255 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 3.0 14 5.0 15 12.0 16 29.0 17 50.0 18 126.0 19 280.0 20 629.0 21 1380.0 22 2467.0 23 4186.0 24 7021.0 25 10417.0 26 15269.0 27 21292.0 28 28645.0 29 38180.0 30 47670.0 31 58869.0 32 72152.0 33 88963.0 34 109386.0 35 135076.0 36 176246.0 37 250058.0 38 342689.0 39 393422.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.995381615237676 20.8762185326127 13.565770974887048 23.562628877262572 2 19.01296018291774 22.768958292117546 35.10061085259461 23.1174706723701 3 19.90022870259076 24.681924958728796 31.919998980342218 23.497847358338223 4 13.973855752781752 16.031347826882058 36.12209736956 33.87269905077619 5 13.25726907937648 37.969839187776074 34.77603826376663 13.996853469080817 6 32.872547764594266 36.85292600221554 13.798463530886487 16.476062702303707 7 26.49918787582563 32.348476913894885 21.818182825748796 19.334152384530682 8 26.744903235030566 34.54833316431397 19.222433357882704 19.48433024277276 9 24.613984717324815 14.422671425808536 21.732564821695657 39.23077903517099 10 16.750594477112283 26.85163480513176 33.615900454800624 22.781870262955334 11 33.32867837388967 22.303517763934817 23.38363460341685 20.984169258758666 12 20.99841121800893 26.705502328310963 30.944119982687983 21.35196647099212 13 31.04331495178515 20.67605527653507 26.300132943425066 21.98049682825472 14 20.723269865177965 22.523963343302704 27.478225595959493 29.274541195559834 15 23.296298697664263 28.909625624886743 25.242293409852003 22.55178226759699 16 22.279245475407127 27.868909692124305 26.430083894560735 23.42176093790783 17 22.0458325090176 26.40320704539195 27.018770015632903 24.532190429957545 18 23.097243765263695 25.331845962958717 29.181829919973488 22.389080351804104 19 23.145234180480536 24.72786497514307 30.007531059385645 22.11936978499075 20 23.92377614743365 24.52332384054104 29.776556405085653 21.77634360693966 21 22.91852657233724 25.285130119970496 30.07070550897825 21.72563779871401 22 21.88074769731902 25.65248400273313 29.80869779172049 22.65807050822736 23 22.519807129513715 25.744585700297083 30.654902919158317 21.08070425103088 24 22.64770768184682 25.835966987470954 28.53645304281953 22.979872287862694 25 22.658292172962778 25.817513398247847 29.309619639938887 22.214574788850484 26 22.413795969802614 26.408526999041854 29.431424412048145 21.74625261910739 27 21.65027178867371 26.58148090884758 29.037858674322965 22.730388628155744 28 21.912224089747617 26.153834218052708 29.36326250590875 22.570679186290924 29 22.26350727919283 26.18292771457562 28.908849798312797 22.64471520791875 30 22.083183016934633 26.261397030911702 30.1257891957283 21.52963075642537 31 22.491600291932457 25.85375558248782 30.161255553394323 21.4933885721854 32 22.04810457255558 25.81330176827501 29.257528427116913 22.8810652320525 33 21.877090229184713 25.855528900371123 29.784758000295923 22.482622870148244 34 21.404722678020335 26.226651083635765 30.17084255320092 22.197783685142976 35 21.16743057876108 27.856385634573495 29.185044058636972 21.79113972802845 36 22.75344176063866 25.813080103539598 29.243785213521328 22.189692922300413 37 21.907347465568538 26.157048356716196 29.314828761221083 22.620775416494183 38 21.839850553635383 25.052603812522616 30.318083353698782 22.78946228014322 39 21.23304334044323 25.044568465863907 31.095627829342536 22.626760364350325 40 20.62562654922869 25.7151042904872 30.65091295392089 23.008356206363217 41 21.541212738850678 24.699713553745664 30.702339172536625 23.056734534867033 42 20.282157041706775 26.42742391773578 30.32124207617841 22.96917696437903 43 20.68486644976772 26.15328005621418 29.607537044333505 23.5543164496846 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 95.0 1 221.5 2 348.0 3 950.0 4 1552.0 5 1552.0 6 2397.0 7 3242.0 8 3525.5 9 3809.0 10 5633.0 11 7457.0 12 7457.0 13 13302.5 14 19148.0 15 29187.0 16 39226.0 17 36277.0 18 33328.0 19 33328.0 20 35812.0 21 38296.0 22 30910.0 23 23524.0 24 26260.5 25 28997.0 26 28997.0 27 31810.5 28 34624.0 29 38293.0 30 41962.0 31 46460.5 32 50959.0 33 50959.0 34 57115.0 35 63271.0 36 70135.5 37 77000.0 38 82540.5 39 88081.0 40 88081.0 41 91802.0 42 95523.0 43 102617.0 44 109711.0 45 116047.0 46 122383.0 47 122383.0 48 150654.0 49 178925.0 50 170988.5 51 163052.0 52 152541.5 53 142031.0 54 142031.0 55 127942.0 56 113853.0 57 98978.5 58 84104.0 59 75348.0 60 66592.0 61 66592.0 62 59088.0 63 51584.0 64 44854.5 65 38125.0 66 33013.5 67 27902.0 68 27902.0 69 24027.0 70 20152.0 71 16991.5 72 13831.0 73 11387.5 74 8944.0 75 8944.0 76 7195.0 77 5446.0 78 4332.0 79 3218.0 80 2643.0 81 2068.0 82 2068.0 83 1537.0 84 1006.0 85 784.5 86 563.0 87 435.5 88 308.0 89 308.0 90 246.0 91 184.0 92 123.5 93 63.0 94 46.5 95 30.0 96 30.0 97 18.0 98 6.0 99 5.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1804527.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.844931398963645 #Duplication Level Percentage of deduplicated Percentage of total 1 81.1415840036488 41.2563827226877 2 10.326641816304944 10.501147894633885 3 3.261233678800899 4.974516080238646 4 1.4615492874510592 2.9724949302661323 5 0.821897881196227 2.0894670693187867 6 0.5047352247313001 1.5397936725662074 7 0.3759068819587241 1.3379071737912758 8 0.294160966834584 1.1965275343165793 9 0.21245326499437886 0.9721954515712535 >10 1.3927413959471735 13.315233444471966 >50 0.11631084719538266 4.119235137487479 >100 0.08204535177057756 7.755440556588529 >500 0.005352881989129492 1.8699533561967825 >1k 0.0029495472184999246 2.960953885585994 >5k 1.0924248957407129E-4 0.40119625413798365 >10k+ 3.277274687222138E-4 2.737554836140754 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18839 1.0439854876097725 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16856 0.9340951950289467 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13591 0.7531613547483634 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7223 0.4002710959714097 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4016 0.22255139435431 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3847 0.21318605928312517 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3739 0.20720111142698336 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3565 0.19755869543653268 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3255 0.18037967844205158 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2918 0.161704424483535 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2058 0.11404650636981326 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2034 0.1127165179573373 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1999 0.11077695152247652 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1920 0.1063990729980765 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1878 0.10407159327624359 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1849 0.10246452394450181 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1840 0.10196577828982333 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.108323677063297E-4 0.0 8 0.0 0.0 0.0 1.6624855155949453E-4 0.0 9 0.0 0.0 0.0 3.3249710311898905E-4 0.0 10 0.0 0.0 0.0 6.095780223848133E-4 0.0 11 1.108323677063297E-4 0.0 0.0 0.0012191560447696267 0.0 12 1.108323677063297E-4 0.0 0.0 0.0015516531478886157 0.0 13 1.108323677063297E-4 0.0 0.0 0.0015516531478886157 0.0 14 1.108323677063297E-4 0.0 0.0 0.0018287340671544398 0.0 15 1.108323677063297E-4 0.0 0.0 0.002549144457245583 0.0 16 1.108323677063297E-4 0.0 0.0 0.0034912195827493855 0.0 17 1.108323677063297E-4 0.0 0.0 0.004433294708253188 0.0 18 1.108323677063297E-4 0.0 0.0 0.005319953649903825 0.0 19 2.216647354126594E-4 0.0 0.0 0.006649942062379782 0.0 20 2.216647354126594E-4 0.0 0.0 0.010584491115954485 0.0 21 2.216647354126594E-4 0.0 0.0 0.017289849362187432 0.0 22 2.216647354126594E-4 0.0 0.0 0.03097764677391915 0.0 23 2.216647354126594E-4 0.0 0.0 0.03879132869721539 0.0 24 2.216647354126594E-4 0.0 0.0 0.051647883351149636 0.0 25 2.216647354126594E-4 0.0 0.0 0.06095780223848133 0.0 26 2.216647354126594E-4 0.0 0.0 0.07326019505388393 0.0 27 2.216647354126594E-4 0.0 0.0 0.12490807840503357 0.0 28 2.216647354126594E-4 0.0 0.0 0.24787659037520635 0.0 29 2.216647354126594E-4 0.0 0.0 0.4034298184510401 0.0 30 2.216647354126594E-4 0.0 0.0 0.6129584095998564 0.0 31 2.216647354126594E-4 0.0 0.0 0.9260044321863846 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATA 65 2.6842554E-6 22.76923 14 GGTATCA 6250 0.0 20.6608 1 GTCGTAC 50 0.0070363996 18.499998 1 TTAACGG 210 0.0 17.619047 35 GTGCGCG 140 1.87174E-9 17.178572 11 TTAGAGT 145 2.9831426E-9 16.586206 4 TAACGGC 230 0.0 16.086956 36 CGTAATA 70 0.0025932607 15.857143 14 TTATGCG 240 0.0 15.416667 4 ACCGTTA 250 0.0 14.800001 8 CCGTTTA 290 0.0 14.672414 27 ATTGGAC 1010 0.0 14.10396 3 GTATCAA 9230 0.0 13.950163 2 CTAATAC 375 0.0 13.813333 3 TACCCCG 230 4.0017767E-11 13.673913 5 TCTATAC 150 1.3065619E-6 13.566667 3 TTGGACC 1315 0.0 13.505703 4 CCTATGT 360 0.0 13.361112 8 TAGCGAA 305 0.0 13.344262 10 CGCAATA 125 4.8473703E-5 13.320001 28 >>END_MODULE