##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088625_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2809823 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.676021229807002 31.0 31.0 34.0 30.0 34.0 2 31.83862257515865 31.0 31.0 34.0 30.0 34.0 3 31.91421203399645 31.0 31.0 34.0 30.0 34.0 4 35.594094361103885 37.0 35.0 37.0 33.0 37.0 5 35.51578480210319 37.0 35.0 37.0 33.0 37.0 6 35.5665278560251 37.0 35.0 37.0 33.0 37.0 7 35.415210851359674 37.0 35.0 37.0 33.0 37.0 8 35.46432070632207 37.0 35.0 37.0 33.0 37.0 9 37.0458164090763 39.0 37.0 39.0 33.0 39.0 10 36.92553445537317 39.0 37.0 39.0 33.0 39.0 11 36.96900552098833 39.0 37.0 39.0 33.0 39.0 12 36.87703140019852 39.0 37.0 39.0 32.0 39.0 13 36.92328769463415 39.0 37.0 39.0 33.0 39.0 14 37.89921180088568 40.0 37.0 41.0 33.0 41.0 15 37.87466470307916 40.0 37.0 41.0 32.0 41.0 16 37.77242054036856 40.0 37.0 41.0 32.0 41.0 17 37.84986954694299 40.0 37.0 41.0 32.0 41.0 18 37.8400564733081 40.0 37.0 41.0 32.0 41.0 19 37.878627586150444 40.0 37.0 41.0 32.0 41.0 20 37.773236250112554 40.0 37.0 41.0 32.0 41.0 21 37.68001614336561 40.0 37.0 41.0 32.0 41.0 22 37.53394003821593 39.0 36.0 41.0 32.0 41.0 23 37.38283479066119 39.0 36.0 41.0 31.0 41.0 24 37.23126581282878 39.0 36.0 41.0 31.0 41.0 25 37.04287850159957 39.0 36.0 41.0 31.0 41.0 26 37.16438615528451 39.0 36.0 41.0 31.0 41.0 27 37.08510144589179 39.0 36.0 41.0 31.0 41.0 28 36.94149382363231 39.0 35.0 41.0 31.0 41.0 29 36.774014590954664 39.0 35.0 41.0 30.0 41.0 30 36.62061951945016 39.0 35.0 40.0 30.0 41.0 31 36.389438765359955 38.0 35.0 40.0 30.0 41.0 32 36.25625315188893 38.0 35.0 40.0 30.0 41.0 33 36.02028561941446 38.0 35.0 40.0 30.0 41.0 34 35.85022472945805 38.0 35.0 40.0 29.0 41.0 35 35.63099383840192 38.0 35.0 40.0 27.0 41.0 36 35.464922879483865 38.0 35.0 40.0 27.0 41.0 37 35.27404501991762 38.0 34.0 40.0 26.0 41.0 38 35.13923190179595 38.0 34.0 40.0 25.0 41.0 39 34.95773256891982 38.0 34.0 40.0 24.0 41.0 40 34.74322012454165 38.0 33.0 40.0 23.0 41.0 41 34.57054554681914 38.0 33.0 40.0 22.0 41.0 42 34.294194687708085 38.0 33.0 40.0 21.0 41.0 43 33.912818351903304 38.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 7.0 14 4.0 15 15.0 16 38.0 17 71.0 18 220.0 19 518.0 20 1010.0 21 2021.0 22 3811.0 23 6588.0 24 10813.0 25 16615.0 26 24876.0 27 34818.0 28 47632.0 29 62060.0 30 77399.0 31 93727.0 32 114459.0 33 140893.0 34 174056.0 35 213615.0 36 276683.0 37 400638.0 38 511968.0 39 595266.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.242909962656014 20.97484432293422 14.398380253845172 22.383865460564596 2 18.685269499181977 23.728576497523154 35.28827260649514 22.297881396799728 3 20.171519700707126 24.815228574895997 32.93702129991818 22.076230424478695 4 13.81830812830559 15.9870568359644 35.77791198947407 34.41672304625594 5 12.946651799775289 38.447475161246814 34.38177422563628 14.224098813341623 6 32.292140821681656 36.514684376916264 13.466471019704802 17.72670378169728 7 25.38273763151629 33.33758033869037 21.580434070046405 19.69924795974693 8 27.260151262196942 34.19991223646472 19.050345875879017 19.48959062545933 9 24.128993178573882 14.661848806846553 22.483444686729378 38.72571332785019 10 16.82664708773471 27.423862641881712 33.01496215242028 22.7345281179633 11 32.37178996684133 22.47031218692423 23.896095946257113 21.26180189997733 12 20.90370105163208 27.39770441056252 31.219724516455305 20.478870021350097 13 32.066646190881066 20.655073291093426 26.875287162216267 20.402993355809247 14 20.219494252840835 23.366560811837616 28.496670430842087 27.91727450447946 15 22.4814160891985 29.42971852675418 26.090362275488527 21.998503108558793 16 21.104425438897753 28.324880250464172 27.41023189005144 23.160462420586637 17 21.326254358370615 26.474870481165542 27.69971631665055 24.499158843813294 18 23.061132320434417 24.871139570001386 30.288064408327497 21.7796637012367 19 22.429491110294137 24.469406080027106 31.699114143488753 21.401988666190004 20 23.637076072051514 24.07799352485904 31.304925612752122 20.98000479033733 21 22.246027596756093 25.06976418087545 31.990164505023984 20.694043717344474 22 20.74682284257763 25.47519897160782 31.623486603960465 22.15449158185409 23 21.90219810998771 25.604495372128422 32.58603833764618 19.90726818023769 24 21.79870404648264 25.609904965544096 30.301695160157777 22.28969582781549 25 21.70474795031573 26.077087417961913 31.014551450393853 21.203613181328503 26 21.434161511241097 26.72698600588009 31.089324843593353 20.749527639285464 27 20.24750313453908 26.846495313049967 30.930631573590222 21.97536997882073 28 20.872951783795635 26.52028259431288 30.785818181429935 21.820947440461552 29 20.837611479441946 26.417251193402574 30.316713899772335 22.428423427383148 30 20.973669871732135 26.690898323488703 32.06077393487063 20.274657869908534 31 21.707381568162834 26.07989898296085 31.883147087912654 20.329572360963663 32 21.422025515486208 26.04434514202496 30.585734403910852 21.94789493857798 33 20.932492900798376 26.16816077026916 31.242394983598608 21.65695134533385 34 20.145397058818297 26.7861356391488 31.70285103367721 21.365616268355694 35 19.67106113089686 28.945488737190917 30.697129320957227 20.686320810954996 36 21.8947243296108 26.178730831087936 30.78991096592205 21.136633873379214 37 20.98281635533626 26.99533031084164 30.57263749353607 21.449215840286026 38 20.73806784270753 25.37601122917707 32.037178142537805 21.848742785577596 39 20.149454253880048 25.202619524432677 32.87990026418034 21.768025957506932 40 19.004542278997643 25.972418903254763 32.41531584017926 22.607722977568336 41 20.575175019921183 24.9878729016027 32.27633911459903 22.160612963877085 42 19.159676605964147 27.07074431378774 31.620532681240064 22.14904639900805 43 19.35417284291573 27.24328187220334 30.654671130530286 22.747874154350647 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 159.0 1 415.0 2 671.0 3 1970.0 4 3269.0 5 3269.0 6 5135.5 7 7002.0 8 7664.0 9 8326.0 10 12145.5 11 15965.0 12 15965.0 13 28811.5 14 41658.0 15 65439.0 16 89220.0 17 80641.0 18 72062.0 19 72062.0 20 76466.5 21 80871.0 22 62401.0 23 43931.0 24 48245.0 25 52559.0 26 52559.0 27 56125.5 28 59692.0 29 63146.5 30 66601.0 31 70911.0 32 75221.0 33 75221.0 34 81376.0 35 87531.0 36 97197.0 37 106863.0 38 112972.0 39 119081.0 40 119081.0 41 125094.0 42 131107.0 43 140636.0 44 150165.0 45 167883.0 46 185601.0 47 185601.0 48 250202.0 49 314803.0 50 293773.0 51 272743.0 52 249392.0 53 226041.0 54 226041.0 55 198451.0 56 170861.0 57 143818.5 58 116776.0 59 102628.5 60 88481.0 61 88481.0 62 77666.0 63 66851.0 64 57922.0 65 48993.0 66 42463.0 67 35933.0 68 35933.0 69 30958.0 70 25983.0 71 21913.5 72 17844.0 73 14734.0 74 11624.0 75 11624.0 76 9219.5 77 6815.0 78 5354.0 79 3893.0 80 3040.5 81 2188.0 82 2188.0 83 1677.5 84 1167.0 85 876.5 86 586.0 87 465.0 88 344.0 89 344.0 90 288.0 91 232.0 92 153.0 93 74.0 94 47.5 95 21.0 96 21.0 97 16.5 98 12.0 99 7.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2809823.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.82187055085697 #Duplication Level Percentage of deduplicated Percentage of total 1 78.09510383590816 35.0036863478881 2 11.683405237370495 10.473441542852493 3 4.096078596886118 5.507817139072963 4 1.8484619777492797 3.314060939394371 5 0.9850314912540956 2.207547699475434 6 0.6227913084883652 1.67488028455586 7 0.41454189195095187 1.3006380113253033 8 0.3152621017455686 1.1304509691224782 9 0.22726133490104306 0.9167650320734555 >10 1.4568944156347765 12.460094294279395 >50 0.14439694929089608 4.505550444592852 >100 0.09758277781831545 8.253206955511779 >500 0.006991271856539575 2.1113112902206996 >1k 0.005402346434597669 4.927864861778776 >5k 4.7667762658214723E-4 1.7000238199121342 >10k+ 3.177850843880982E-4 4.512660367943802 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 43844 1.5603829849780573 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 36863 1.3119331715912355 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 30238 1.0761531954148 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15782 0.5616723900402267 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8510 0.3028660524168248 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 8405 0.2991291622283681 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8387 0.2984885524817755 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8290 0.29503637773624886 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7596 0.2703373130620683 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6553 0.23321753719006502 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4733 0.16844477392348203 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4568 0.16257251791305002 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4419 0.15726969278847813 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4283 0.15242953025866754 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 4039 0.14374570924930147 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3994 0.14214418488282002 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 3868 0.13765991665667196 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3795 0.1350618882399354 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3675 0.1307911565959849 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3397 0.12089729495416615 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 3304 0.11758747793010449 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 3252 0.11573682755105927 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.558943036625439E-5 0.0 2 0.0 0.0 0.0 3.558943036625439E-5 0.0 3 0.0 0.0 0.0 3.558943036625439E-5 0.0 4 0.0 0.0 0.0 3.558943036625439E-5 0.0 5 0.0 0.0 0.0 3.558943036625439E-5 0.0 6 3.558943036625439E-5 0.0 0.0 3.558943036625439E-5 0.0 7 7.117886073250877E-5 0.0 0.0 3.558943036625439E-5 0.0 8 1.0676829109876315E-4 0.0 0.0 7.117886073250877E-5 0.0 9 1.0676829109876315E-4 0.0 0.0 7.117886073250877E-5 0.0 10 1.7794715183127194E-4 0.0 0.0 2.847154429300351E-4 0.0 11 1.7794715183127194E-4 0.0 0.0 7.117886073250878E-4 0.0 12 1.7794715183127194E-4 0.0 0.0 0.0014235772146501755 0.0 13 1.7794715183127194E-4 0.0 0.0 0.0017082926575802105 0.0 14 2.491260125637807E-4 0.0 0.0 0.0019218292397777368 0.0 15 2.491260125637807E-4 0.0 0.0 0.0026336178471028245 0.0 16 2.491260125637807E-4 0.0 0.0 0.0036301218973579475 0.0 17 2.847154429300351E-4 0.0 0.0 0.005018109681641869 0.0 18 3.203048732962895E-4 0.0 0.0 0.005623129997868193 0.0 19 3.914837340287983E-4 0.0 0.0 0.007295833225082149 0.0 20 3.914837340287983E-4 0.0 0.0 0.012990142083682852 0.0 21 3.914837340287983E-4 3.558943036625439E-5 0.0 0.023382255750629133 0.0 22 3.914837340287983E-4 3.558943036625439E-5 0.0 0.03722654416310209 0.0 23 3.914837340287983E-4 3.558943036625439E-5 0.0 0.04712040580492081 0.0 24 4.270731643950526E-4 3.558943036625439E-5 0.0 0.061961198267648884 0.0 25 4.270731643950526E-4 3.558943036625439E-5 0.0 0.07267361680789146 0.0 26 4.62662594761307E-4 3.558943036625439E-5 0.0 0.0876211775617183 0.0 27 4.62662594761307E-4 3.558943036625439E-5 0.0 0.15221599367647 0.0 28 4.62662594761307E-4 3.558943036625439E-5 0.0 0.3014068857718084 0.0 29 4.62662594761307E-4 3.558943036625439E-5 0.0 0.5021668624678494 0.0 30 4.62662594761307E-4 3.558943036625439E-5 0.0 0.7856722647654318 0.0 31 4.982520251275614E-4 3.558943036625439E-5 0.0 1.1884022587899665 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTC 90 9.490577E-8 20.555557 7 GGTATCA 13950 0.0 20.064873 1 GTCGGGT 280 0.0 16.517857 24 GTATTGG 1670 0.0 16.284431 1 TCGGTTC 95 7.06548E-5 15.578948 13 TTGGACC 2175 0.0 15.14023 4 GTCTAAT 185 3.0559022E-10 15.0 1 TAGCGAA 410 0.0 14.439025 10 CGGGTAA 295 0.0 14.423729 26 TAGTACT 570 0.0 14.280703 4 GGTAGCG 415 0.0 14.26506 8 TTAACGG 130 4.449179E-6 14.230769 35 CCGTTTA 365 0.0 14.191781 27 TCGGGTA 300 0.0 14.183333 25 ACGTTTA 170 2.4409019E-8 14.147059 26 GGACCGT 580 0.0 14.034483 6 ATTGGAC 1850 0.0 13.9 3 AGTTCCG 360 0.0 13.875001 32 ACCGTTA 400 0.0 13.875001 8 TATTGGA 1920 0.0 13.7786455 2 >>END_MODULE