##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088624_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3957692 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.650564773610476 31.0 31.0 34.0 30.0 34.0 2 31.826678023454075 31.0 31.0 34.0 30.0 34.0 3 31.902117951573796 31.0 31.0 34.0 30.0 34.0 4 35.59634099874371 37.0 35.0 37.0 33.0 37.0 5 35.50056901850877 37.0 35.0 37.0 33.0 37.0 6 35.538698059374 37.0 35.0 37.0 33.0 37.0 7 35.40771591119268 37.0 35.0 37.0 33.0 37.0 8 35.434840811260706 37.0 35.0 37.0 33.0 37.0 9 37.0310200995934 39.0 37.0 39.0 33.0 39.0 10 36.883570272775145 39.0 37.0 39.0 33.0 39.0 11 36.92959027635298 39.0 37.0 39.0 33.0 39.0 12 36.833805915164696 39.0 37.0 39.0 32.0 39.0 13 36.88371909688778 39.0 37.0 39.0 33.0 39.0 14 37.897323743232164 40.0 37.0 41.0 33.0 41.0 15 37.85528787990577 40.0 37.0 41.0 32.0 41.0 16 37.75416303239363 40.0 37.0 41.0 32.0 41.0 17 37.788047932987205 40.0 37.0 41.0 32.0 41.0 18 37.765006220797375 40.0 37.0 41.0 32.0 41.0 19 37.790734852535266 40.0 37.0 41.0 32.0 41.0 20 37.67432736049192 40.0 37.0 41.0 32.0 41.0 21 37.57405326134525 39.0 37.0 41.0 32.0 41.0 22 37.419528604044984 39.0 36.0 41.0 32.0 41.0 23 37.28877689319937 39.0 36.0 41.0 31.0 41.0 24 37.14933931190199 39.0 36.0 41.0 31.0 41.0 25 36.941075505622976 39.0 36.0 41.0 30.0 41.0 26 37.08986222272981 39.0 36.0 41.0 31.0 41.0 27 37.01024864997074 39.0 36.0 41.0 31.0 41.0 28 36.88759458795682 39.0 35.0 41.0 30.0 41.0 29 36.74037949390706 39.0 35.0 41.0 30.0 41.0 30 36.61490282720333 39.0 35.0 40.0 30.0 41.0 31 36.42984598094041 39.0 35.0 40.0 30.0 41.0 32 36.30331112173459 38.0 35.0 40.0 30.0 41.0 33 36.10057553745971 38.0 35.0 40.0 30.0 41.0 34 35.958697392318555 38.0 35.0 40.0 29.0 41.0 35 35.77042579361911 38.0 35.0 40.0 28.0 41.0 36 35.62511332362397 38.0 35.0 40.0 27.0 41.0 37 35.45893060905194 38.0 34.0 40.0 26.0 41.0 38 35.367122302594545 38.0 34.0 40.0 26.0 41.0 39 35.22370361311593 38.0 34.0 40.0 25.0 41.0 40 35.0349875634587 38.0 34.0 40.0 24.0 41.0 41 34.900813403367415 38.0 34.0 40.0 24.0 41.0 42 34.68220619492371 38.0 33.0 40.0 23.0 41.0 43 34.31158791538098 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 6.0 12 5.0 13 5.0 14 13.0 15 33.0 16 53.0 17 142.0 18 337.0 19 735.0 20 1511.0 21 3011.0 22 5744.0 23 9504.0 24 15285.0 25 23554.0 26 34269.0 27 47841.0 28 64634.0 29 84389.0 30 105719.0 31 130496.0 32 159770.0 33 196763.0 34 243091.0 35 300137.0 36 391130.0 37 554229.0 38 754417.0 39 830869.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.77027924355913 21.114781039050033 13.797587078529608 23.317352638861237 2 19.182670101665313 23.192431346350347 34.720008530224185 22.904890021760156 3 20.090749861282788 24.61053058196545 32.110861582963004 23.187857973788763 4 13.96955599374585 16.35574471181689 35.9862263157416 33.688472978695664 5 13.19812153143802 38.23147430371034 34.590033787369 13.980370377482634 6 32.60796949333096 36.97773854054333 13.812671627807319 16.601620338318394 7 26.409659973540133 32.51185286778254 21.63313870811574 19.44534845056159 8 27.066911725318697 34.36636807513065 18.979066587293804 19.58765361225684 9 24.77267053626204 14.40268722275508 21.642209651483743 39.182432589499136 10 16.869276335803796 27.178870917696475 33.236290241888454 22.715562504611274 11 33.424581801716755 22.481107675887866 23.234551854970018 20.859758667425357 12 21.17193556244397 26.987976830940863 30.70870598318414 21.131381623431032 13 31.291469876887845 20.734458366138647 26.125959271211606 21.848112485761902 14 20.66254776773938 22.731986218230222 27.6386085627684 28.966857451261994 15 23.389616978784606 29.13104405294803 25.20216328102338 22.27717568724398 16 22.1953603261699 27.860177093113865 26.55055016913898 23.393912411577254 17 22.065284514307834 26.49059098080396 27.097106091125838 24.347018413762363 18 22.80937981025305 25.35452480890378 29.41039878798047 22.42569659286271 19 23.057706360171533 24.818606399891653 30.243990689523088 21.879696550413726 20 23.72769280681771 24.558682181433017 30.04316657284094 21.670458438908334 21 22.729813234582174 25.361043759847913 30.362241427579505 21.546901577990404 22 21.82913677971909 25.811634659796667 29.96450961823204 22.3947189422522 23 22.38948862114586 25.917327573747528 30.710373621797753 20.98281018330886 24 22.475852087529802 26.09167161062559 28.627821467663477 22.804654834181136 25 22.517164044094386 25.934660908428448 29.606826402863085 21.941348644614084 26 22.18426800266418 26.62377466462777 29.674087826945605 21.517869505762448 27 21.542050265659885 26.616068152852723 29.248789445970026 22.593092135517367 28 21.748104703448373 26.367236257899805 29.538554288711705 22.346104749940114 29 22.085548850188445 26.36468426547594 29.03616552273396 22.51360136160166 30 21.862716957256907 26.51080478218113 30.42571276390381 21.200765496658153 31 22.316087254895027 26.17373964421688 30.21493335004341 21.295239750844686 32 21.90281608573886 26.039039925289792 29.434402677115855 22.623741311855493 33 21.68966155021664 26.11443740442662 29.897677737428786 22.29822330792795 34 21.224845187548702 26.383912644035966 30.36901305104086 22.02222911737447 35 20.98558958099822 27.96377282517184 29.438394902887843 21.612242690942093 36 22.551729644449342 26.099403389652352 29.482789464162444 21.86607750173586 37 21.6348568812328 26.42572994563498 29.48195564485564 22.45745752827658 38 21.53411634861935 25.262501478134226 30.699660307067855 22.503721866178573 39 21.022126026987443 25.2426919527846 31.315574835030112 22.419607185197837 40 20.282048224065946 25.910808622803394 30.96544652792587 22.84169662520479 41 21.179414668953523 24.868686092803582 31.120183177468082 22.831716060774816 42 20.022225074614195 26.586859209862716 30.5600587413068 22.830856974216285 43 20.34850109609338 26.210175021199223 30.077580569685562 23.363743313021832 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 205.0 1 477.0 2 749.0 3 2113.0 4 3477.0 5 3477.0 6 5365.5 7 7254.0 8 7991.0 9 8728.0 10 12847.0 11 16966.0 12 16966.0 13 31033.5 14 45101.0 15 69999.5 16 94898.0 17 86359.5 18 77821.0 19 77821.0 20 83030.0 21 88239.0 22 70038.5 23 51838.0 24 57931.0 25 64024.0 26 64024.0 27 70468.0 28 76912.0 29 85218.0 30 93524.0 31 103195.5 32 112867.0 33 112867.0 34 125982.5 35 139098.0 36 154225.0 37 169352.0 38 182573.5 39 195795.0 40 195795.0 41 202899.0 42 210003.0 43 226934.5 44 243866.0 45 254880.0 46 265894.0 47 265894.0 48 326190.0 49 386486.0 50 370146.0 51 353806.0 52 329454.5 53 305103.0 54 305103.0 55 275804.0 56 246505.0 57 214343.0 58 182181.0 59 162225.0 60 142269.0 61 142269.0 62 126526.5 63 110784.0 64 96774.5 65 82765.0 66 71390.5 67 60016.0 68 60016.0 69 51676.0 70 43336.0 71 37018.0 72 30700.0 73 25259.5 74 19819.0 75 19819.0 76 15947.5 77 12076.0 78 9442.0 79 6808.0 80 5360.5 81 3913.0 82 3913.0 83 2996.5 84 2080.0 85 1616.5 86 1153.0 87 882.0 88 611.0 89 611.0 90 497.5 91 384.0 92 282.5 93 181.0 94 125.0 95 69.0 96 69.0 97 47.0 98 25.0 99 18.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3957692.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.20001897841226 #Duplication Level Percentage of deduplicated Percentage of total 1 76.34192683726563 32.97972688218435 2 12.370058376493892 10.687735132572072 3 4.528666187113601 5.869153956906045 4 2.0407341578220715 3.526390173912306 5 1.1627338677478511 2.511506257677493 6 0.7028405653300857 1.8217635456634618 7 0.4546779076268452 1.374946596698114 8 0.33100911041202447 1.143967988146145 9 0.23836792070043175 0.9267748828292988 >10 1.5382713075743082 12.732063650621905 >50 0.159486551640444 4.798699100428106 >100 0.1154624484420603 9.89020201019907 >500 0.00931820495522232 2.7453933390629857 >1k 0.005860506250505256 4.439481713324233 >5k 3.5163037503031536E-4 1.1313332525910973 >10k+ 2.344202500202102E-4 3.4208615171833787 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 46847 1.1836949413951363 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 39164 0.9895666464191756 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 31916 0.8064296059420489 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17192 0.43439459159530347 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8251 0.2084800939537488 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8156 0.2060797050402103 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7932 0.20041984065460372 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7344 0.1855626966423865 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6853 0.1731564760471507 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6150 0.15539359808696582 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4821 0.12181342054914834 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4406 0.11132751108474334 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4226 0.10677940577488092 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4185 0.10574344845430116 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4081 0.10311565427526953 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.526725172145786E-5 0.0 5 0.0 0.0 0.0 2.526725172145786E-5 0.0 6 7.580175516437358E-5 0.0 0.0 5.053450344291572E-5 0.0 7 7.580175516437358E-5 0.0 0.0 5.053450344291572E-5 0.0 8 7.580175516437358E-5 0.0 0.0 5.053450344291572E-5 0.0 9 7.580175516437358E-5 0.0 0.0 1.5160351032874716E-4 0.0 10 7.580175516437358E-5 0.0 0.0 1.76870762050205E-4 0.0 11 7.580175516437358E-5 0.0 0.0 4.295432792647836E-4 0.0 12 7.580175516437358E-5 0.0 0.0 5.55879537872073E-4 0.0 13 7.580175516437358E-5 0.0 0.0 6.316812930364465E-4 0.0 14 7.580175516437358E-5 0.0 0.0 7.580175516437358E-4 0.0 15 7.580175516437358E-5 0.0 0.0 0.0010106900688583143 0.0 16 1.0106900688583144E-4 0.0 0.0 0.0015665696067303874 0.0 17 1.0106900688583144E-4 0.0 0.0 0.00247619066870287 0.0 18 1.263362586072893E-4 0.0 0.0 0.0029310011996891115 0.0 19 1.263362586072893E-4 0.0 0.0 0.0038658895133830526 0.0 20 1.263362586072893E-4 0.0 0.0 0.00636734743380738 0.0 21 1.263362586072893E-4 0.0 0.0 0.010940719995391254 0.0 22 1.76870762050205E-4 0.0 0.0 0.01841982650494278 0.0 23 1.76870762050205E-4 0.0 0.0 0.02382701837333476 0.0 24 1.76870762050205E-4 0.0 0.0 0.0327968927344523 0.0 25 1.76870762050205E-4 0.0 0.0 0.03898736940620948 0.0 26 1.76870762050205E-4 0.0 0.0 0.04863945956380638 0.0 27 2.0213801377166288E-4 0.0 0.0 0.10261030924084037 0.0 28 2.0213801377166288E-4 0.0 0.0 0.22295822919014416 0.0 29 2.2740526549312073E-4 0.0 0.0 0.3791098448287537 0.0 30 2.2740526549312073E-4 0.0 0.0 0.5967872184091132 0.0 31 2.2740526549312073E-4 0.0 0.0 0.9171254357337559 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14065 0.0 20.939922 1 ACGTTTA 185 0.0 19.0 26 GTATTGG 1665 0.0 17.0 1 ACCGTTA 720 0.0 16.70139 8 CCGTTTA 745 0.0 15.644295 27 TAATACT 1015 0.0 15.1280775 4 GACCGTT 795 0.0 14.893081 7 TGTTACG 460 0.0 14.880435 16 GGACCGT 1010 0.0 14.653464 6 CTAATAC 1125 0.0 14.635556 3 TCTAATA 1100 0.0 14.127272 2 ATTGGAC 2125 0.0 13.929411 3 CGTTTAC 845 0.0 13.7929 28 GTATCAA 21410 0.0 13.738907 2 CTCTAAT 1010 0.0 13.737623 1 TACTCCG 920 0.0 13.673913 5 CCGTTAT 870 0.0 13.609195 9 TGGACCC 2250 0.0 13.402223 5 CGCCGTT 865 0.0 13.260115 25 GTATACT 210 2.046363E-9 13.214285 4 >>END_MODULE