##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088621_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3477923 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.691029099839184 31.0 31.0 34.0 30.0 34.0 2 31.863313535118518 31.0 31.0 34.0 30.0 34.0 3 31.95048107735565 31.0 31.0 34.0 30.0 34.0 4 35.63648936448564 37.0 35.0 37.0 33.0 37.0 5 35.53847080570789 37.0 35.0 37.0 33.0 37.0 6 35.56930558842159 37.0 35.0 37.0 33.0 37.0 7 35.44470909793 37.0 35.0 37.0 33.0 37.0 8 35.46708394636684 37.0 35.0 37.0 33.0 37.0 9 37.07833410917953 39.0 37.0 39.0 33.0 39.0 10 36.94706524555029 39.0 37.0 39.0 33.0 39.0 11 36.9827652883632 39.0 37.0 39.0 33.0 39.0 12 36.8921045693076 39.0 37.0 39.0 33.0 39.0 13 36.94073819345627 39.0 37.0 39.0 33.0 39.0 14 37.97919361641991 40.0 37.0 41.0 33.0 41.0 15 37.94078189770159 40.0 37.0 41.0 33.0 41.0 16 37.84418861487158 40.0 37.0 41.0 32.0 41.0 17 37.86660400474651 40.0 37.0 41.0 33.0 41.0 18 37.83892081567073 40.0 37.0 41.0 32.0 41.0 19 37.85772111688499 40.0 37.0 41.0 32.0 41.0 20 37.7426791794988 40.0 37.0 41.0 32.0 41.0 21 37.65117916641628 40.0 37.0 41.0 32.0 41.0 22 37.50115744368119 39.0 36.0 41.0 32.0 41.0 23 37.37955325635444 39.0 36.0 41.0 31.0 41.0 24 37.23787616919638 39.0 36.0 41.0 31.0 41.0 25 37.05811169482475 39.0 36.0 41.0 31.0 41.0 26 37.20996410788853 39.0 36.0 41.0 31.0 41.0 27 37.131265125766156 39.0 36.0 41.0 31.0 41.0 28 37.017004114237146 39.0 36.0 41.0 31.0 41.0 29 36.869037928671794 39.0 35.0 41.0 30.0 41.0 30 36.76050188575193 39.0 35.0 41.0 30.0 41.0 31 36.58369607377737 39.0 35.0 40.0 30.0 41.0 32 36.46350824903254 39.0 35.0 40.0 30.0 41.0 33 36.257630775609464 38.0 35.0 40.0 30.0 41.0 34 36.12017373587627 38.0 35.0 40.0 30.0 41.0 35 35.927845728614464 38.0 35.0 40.0 29.0 41.0 36 35.78315333605718 38.0 35.0 40.0 27.0 41.0 37 35.61813156875526 38.0 35.0 40.0 27.0 41.0 38 35.53638766585689 38.0 35.0 40.0 26.0 41.0 39 35.404043447770405 38.0 34.0 40.0 26.0 41.0 40 35.23376883271999 38.0 34.0 40.0 25.0 41.0 41 35.11341826716693 38.0 34.0 40.0 24.0 41.0 42 34.90638521899421 38.0 34.0 40.0 23.0 41.0 43 34.55603444929632 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 6.0 13 5.0 14 10.0 15 32.0 16 46.0 17 98.0 18 266.0 19 524.0 20 1198.0 21 2413.0 22 4352.0 23 7629.0 24 12418.0 25 19112.0 26 27864.0 27 39989.0 28 54041.0 29 71485.0 30 90406.0 31 111473.0 32 136082.0 33 168969.0 34 208819.0 35 259153.0 36 337004.0 37 477598.0 38 661512.0 39 785418.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.02887758009594 20.987324906273084 13.586471005827327 23.39732650780365 2 18.735176138172122 23.136222394802875 35.11920764203233 23.009393824992674 3 19.995612323792102 24.80937617077779 31.922443366342495 23.27256813908761 4 14.05404892517747 16.093110744544948 35.968823921633685 33.884016408643895 5 13.41165402454281 37.96064490214418 34.58912115075578 14.038579922557226 6 32.83091661316251 36.61719940320703 14.049534736680483 16.502349246949976 7 26.301991159666272 32.47616465344402 21.888408685298668 19.333435501591037 8 26.80861537187569 34.534375832932476 19.34436156292132 19.312647232270525 9 24.718229817048854 14.4770025098313 21.90373392395404 38.90103374916581 10 16.52621406511875 27.194535359178452 33.60016883640034 22.67908173930245 11 33.23431829859373 22.39365276344531 23.463256662094015 20.908772275866948 12 20.787521747893788 26.640756566490975 31.382782195005465 21.18893949060977 13 31.297386399871417 20.74220734616609 26.267976605577527 21.69242964838497 14 20.67713977566496 22.575082887113947 27.73086120653045 29.016916130690646 15 23.208679433098432 29.11059273020133 25.159700200378214 22.52102763632202 16 22.224270060032953 27.922613582876902 26.49621627620853 23.35690008088161 17 21.78093074516026 26.55616584956021 27.33516526961638 24.32773813566315 18 23.06546177129281 25.378566460499556 29.2642189030637 22.291752865143938 19 22.904446130636014 24.97392840497044 30.142616728432458 21.979008735961088 20 23.773815579010808 24.647641710296632 29.858682897809985 21.719859812882575 21 22.8461067136909 25.30366543480117 30.184682064554046 21.66554578695388 22 21.817648061788603 25.6363352495153 29.97625306828242 22.569763620413678 23 22.388448507916937 25.789731400033872 30.641535192124724 21.180284899924466 24 22.505242352979064 25.821071944375994 28.908086809282434 22.765598893362505 25 22.51450075231683 25.958596553172686 29.442888758606788 22.084013935903698 26 22.321281983528678 26.38137762106867 29.54867028395971 21.74867011144295 27 21.49130386152885 26.57479765940764 29.416953739343853 22.516944739719655 28 21.813248884463516 26.299949711365088 29.427160980849777 22.45964042332162 29 21.862272396484915 26.281087879173864 29.130374651767738 22.726265072573486 30 21.867332888048413 26.50323195769429 30.264327301093207 21.365107853164087 31 22.506478723076963 25.97771716050068 30.147217175308366 21.368586941113993 32 22.069637539416483 26.008137615467625 29.275116211601006 22.647108633514886 33 21.86776417994303 25.94663539129532 29.867768780389902 22.317831648371744 34 21.279280766135418 26.346097944089042 30.146814636206727 22.22780665356881 35 20.996497047231927 27.86286527907605 29.460571726286062 21.680065947405964 36 22.470278956722158 26.042468450279088 29.515259538523424 21.971993054475327 37 21.834698468022438 26.357771578036658 29.43664940253134 22.370880551409563 38 21.55300735525197 25.329801723614924 30.582735730492022 22.534455190641083 39 21.143826358432893 25.123327917265563 31.19640659094523 22.536439133356318 40 20.380382199375894 25.732743364358555 30.962416361719335 22.924458074546216 41 21.337303902357814 24.873322382352917 30.94573974179417 22.843633973495102 42 20.11197487695961 26.44348365389343 30.562234989101256 22.882306480045706 43 20.295388943343482 26.41677230922019 29.938213123177253 23.349625624259076 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 236.0 1 461.5 2 687.0 3 2007.5 4 3328.0 5 3328.0 6 5155.0 7 6982.0 8 7451.0 9 7920.0 10 11447.5 11 14975.0 12 14975.0 13 26428.0 14 37881.0 15 57987.0 16 78093.0 17 72511.5 18 66930.0 19 66930.0 20 71953.0 21 76976.0 22 62946.0 23 48916.0 24 54902.5 25 60889.0 26 60889.0 27 67246.0 28 73603.0 29 80856.5 30 88110.0 31 95004.5 32 101899.0 33 101899.0 34 111631.0 35 121363.0 36 132901.0 37 144439.0 38 154098.5 39 163758.0 40 163758.0 41 171056.5 42 178355.0 43 189095.0 44 199835.0 45 215468.0 46 231101.0 47 231101.0 48 285823.5 49 340546.0 50 325656.5 51 310767.0 52 292153.0 53 273539.0 54 273539.0 55 246894.0 56 220249.0 57 193012.0 58 165775.0 59 148383.0 60 130991.0 61 130991.0 62 116144.0 63 101297.0 64 87838.0 65 74379.0 66 63511.5 67 52644.0 68 52644.0 69 45267.0 70 37890.0 71 31772.0 72 25654.0 73 20876.5 74 16099.0 75 16099.0 76 12993.0 77 9887.0 78 7675.5 79 5464.0 80 4246.0 81 3028.0 82 3028.0 83 2341.5 84 1655.0 85 1228.5 86 802.0 87 635.5 88 469.0 89 469.0 90 389.0 91 309.0 92 212.5 93 116.0 94 85.5 95 55.0 96 55.0 97 39.5 98 24.0 99 16.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3477923.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.66061933832236 #Duplication Level Percentage of deduplicated Percentage of total 1 78.2573061942278 38.863062933540824 2 12.172482221106137 12.089860119696972 3 4.021879517045452 5.9918708316177 4 1.7642296186840407 3.5045094207544696 5 0.9416236637696499 2.338080716321052 6 0.5776378802581629 1.7211512932137636 7 0.3738703028091985 1.2996641552797643 8 0.2630293392116707 1.0449759911520995 9 0.2025461077722244 0.9052708640881726 >10 1.2114189486053146 11.420836729422168 >50 0.12207033187077773 4.206716517897573 >100 0.08319773684189195 7.586748006152234 >500 0.004992665671507122 1.732314284176963 >1k 0.0031349296064130745 2.9870291127832953 >5k 3.4832551182367494E-4 1.1299669817623008 >10k+ 2.3221700788244993E-4 3.1779420421405935 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37367 1.0744056150754344 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 32398 0.9315329867855039 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26377 0.7584124202864756 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14088 0.40506934742373535 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7413 0.21314445431943146 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7088 0.2037997966027425 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7088 0.2037997966027425 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6393 0.18381660548551534 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5868 0.1687213891739409 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5344 0.15365492565534083 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4226 0.12150930310993084 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3977 0.11434985765929838 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3728 0.10719041220866592 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3482 0.10011722513695673 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.8752792974427555E-5 0.0 5 0.0 0.0 0.0 2.8752792974427555E-5 0.0 6 0.0 0.0 5.750558594885511E-5 2.8752792974427555E-5 0.0 7 2.8752792974427555E-5 0.0 5.750558594885511E-5 2.8752792974427555E-5 0.0 8 2.8752792974427555E-5 0.0 5.750558594885511E-5 2.8752792974427555E-5 0.0 9 2.8752792974427555E-5 0.0 5.750558594885511E-5 1.1501117189771022E-4 0.0 10 2.8752792974427555E-5 0.0 5.750558594885511E-5 1.7251675784656531E-4 0.0 11 2.8752792974427555E-5 0.0 5.750558594885511E-5 3.737863086675582E-4 0.0 12 2.8752792974427555E-5 0.0 5.750558594885511E-5 9.200893751816817E-4 0.0 13 5.750558594885511E-5 0.0 5.750558594885511E-5 0.001035100547079392 0.0 14 5.750558594885511E-5 0.0 8.625837892328266E-5 0.0012076173049259573 0.0 15 1.1501117189771022E-4 0.0 8.625837892328266E-5 0.0014376396487213777 0.0 16 1.1501117189771022E-4 0.0 1.1501117189771022E-4 0.0020414483011843565 0.0 17 1.1501117189771022E-4 0.0 1.1501117189771022E-4 0.0028752792974427554 0.0 18 1.1501117189771022E-4 0.0 1.1501117189771022E-4 0.003622851914777872 0.0 19 1.1501117189771022E-4 0.0 1.1501117189771022E-4 0.004485435704010698 0.0 20 1.1501117189771022E-4 0.0 1.4376396487213777E-4 0.007907018067967578 0.0 21 1.1501117189771022E-4 0.0 1.4376396487213777E-4 0.013197531975262248 0.0 22 1.1501117189771022E-4 0.0 1.4376396487213777E-4 0.022254661762206928 0.0 23 1.1501117189771022E-4 0.0 1.4376396487213777E-4 0.029184084869043968 0.0 24 1.1501117189771022E-4 0.0 1.4376396487213777E-4 0.04103023557450812 0.0 25 2.3002234379542044E-4 0.0 1.4376396487213777E-4 0.04896600643545013 0.0 26 2.3002234379542044E-4 0.0 1.4376396487213777E-4 0.06170349372312153 0.0 27 2.3002234379542044E-4 0.0 1.4376396487213777E-4 0.11403357693657967 0.0 28 2.3002234379542044E-4 0.0 1.4376396487213777E-4 0.23424900436266127 0.0 29 2.3002234379542044E-4 0.0 1.4376396487213777E-4 0.38804769398287425 0.0 30 2.3002234379542044E-4 0.0 1.4376396487213777E-4 0.5975405435945534 0.0 31 2.3002234379542044E-4 0.0 1.4376396487213777E-4 0.9154314227198245 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11755 0.0 19.98724 1 GTATTGG 1820 0.0 16.365385 1 TTGGACC 2275 0.0 15.287911 4 ATTGGAC 2000 0.0 15.2625 3 ACCGTTA 490 0.0 15.10204 8 TATACTG 560 0.0 14.866071 5 TCGGGTA 380 0.0 14.605264 25 AAGACCG 385 0.0 14.415584 5 GTCTATA 270 0.0 14.388889 1 CGGGTAA 405 0.0 14.160494 26 ATTAGAC 280 0.0 13.875 3 TTCGCTA 430 0.0 13.767442 26 TATTGGA 2310 0.0 13.694805 2 CTGTGCG 370 0.0 13.5 9 TGGACCC 2550 0.0 13.494118 5 GACCGTT 580 0.0 13.396551 7 CGCTACC 500 0.0 13.32 28 GTATCAA 17665 0.0 13.310785 2 CGTTCGC 520 0.0 13.163462 23 TGCGACG 225 4.0745363E-10 13.155556 22 >>END_MODULE