##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088617_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 594611 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.725097584807546 31.0 31.0 34.0 30.0 34.0 2 31.902833953626825 31.0 31.0 34.0 30.0 34.0 3 31.979532837434895 31.0 31.0 34.0 30.0 34.0 4 35.668541281611006 37.0 35.0 37.0 33.0 37.0 5 35.57841849545333 37.0 35.0 37.0 33.0 37.0 6 35.611359359312225 37.0 35.0 37.0 33.0 37.0 7 35.473142945556 37.0 35.0 37.0 33.0 37.0 8 35.503900869644184 37.0 35.0 37.0 33.0 37.0 9 37.11291752086658 39.0 37.0 39.0 33.0 39.0 10 36.98786769837759 39.0 37.0 39.0 33.0 39.0 11 37.027554148846896 39.0 37.0 39.0 33.0 39.0 12 36.930998585629936 39.0 37.0 39.0 33.0 39.0 13 36.9669582298343 39.0 37.0 39.0 33.0 39.0 14 38.000110996937494 40.0 37.0 41.0 33.0 41.0 15 37.95850228132342 40.0 37.0 41.0 33.0 41.0 16 37.84500286742089 40.0 37.0 41.0 32.0 41.0 17 37.88802427133033 40.0 37.0 41.0 33.0 41.0 18 37.869846000158084 40.0 37.0 41.0 33.0 41.0 19 37.88282927830127 40.0 37.0 41.0 32.0 41.0 20 37.783973051288996 40.0 37.0 41.0 32.0 41.0 21 37.671077393455555 40.0 37.0 41.0 32.0 41.0 22 37.52502224143179 39.0 36.0 41.0 32.0 41.0 23 37.3836087795214 39.0 36.0 41.0 31.0 41.0 24 37.246544379434624 39.0 36.0 41.0 31.0 41.0 25 37.05205251836915 39.0 36.0 41.0 31.0 41.0 26 37.206106176979574 39.0 36.0 41.0 31.0 41.0 27 37.12472019522007 39.0 36.0 41.0 31.0 41.0 28 36.99271288287637 39.0 36.0 41.0 31.0 41.0 29 36.853401635691235 39.0 35.0 41.0 30.0 41.0 30 36.72287091897056 39.0 35.0 41.0 30.0 41.0 31 36.53537186496718 39.0 35.0 40.0 30.0 41.0 32 36.41869390240006 38.0 35.0 40.0 30.0 41.0 33 36.19891660261919 38.0 35.0 40.0 30.0 41.0 34 36.05431954672887 38.0 35.0 40.0 29.0 41.0 35 35.87136464007561 38.0 35.0 40.0 29.0 41.0 36 35.70474814626706 38.0 35.0 40.0 27.0 41.0 37 35.53346978108377 38.0 35.0 40.0 27.0 41.0 38 35.44584610779148 38.0 34.0 40.0 26.0 41.0 39 35.2968613093266 38.0 34.0 40.0 25.0 41.0 40 35.10816987913106 38.0 34.0 40.0 24.0 41.0 41 34.96763934740528 38.0 34.0 40.0 24.0 41.0 42 34.72818699956778 38.0 33.0 40.0 23.0 41.0 43 34.36237304725274 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 3.0 15 2.0 16 11.0 17 14.0 18 46.0 19 103.0 20 198.0 21 391.0 22 703.0 23 1241.0 24 2012.0 25 3277.0 26 4808.0 27 6679.0 28 9312.0 29 12312.0 30 15174.0 31 19056.0 32 23515.0 33 28975.0 34 36332.0 35 45408.0 36 58685.0 37 83109.0 38 112545.0 39 130700.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.060944045771095 20.837656888284947 13.770851867859829 23.330547198084126 2 19.242664531937688 22.706946221983785 35.12077644039549 22.929612805683046 3 20.031751851210284 24.339778443385676 32.33475330930642 23.293716396097615 4 14.041448947294954 16.111037300016314 35.647002830421904 34.20051092226682 5 13.25370704544652 37.73744515321782 34.72186017413065 14.286987627205013 6 32.74762828134696 36.33198847649976 13.618819698929215 17.30156354322406 7 26.007759694993872 32.73686494195365 21.513056435215628 19.742318927836855 8 26.699976959726612 34.50928422111262 19.013439038295626 19.77729978086514 9 24.431098651050856 14.511504159862499 21.800975763986877 39.25642142509977 10 17.117745887647555 26.70182690868484 33.176816439655504 23.0036107640121 11 33.163530442591885 22.356296805810857 23.163042728775622 21.317130022821644 12 21.085381871509274 26.854531786327527 30.635995634120462 21.424090708042737 13 31.472845271950906 20.60944045771101 26.214449446781174 21.703264823556914 14 20.779803939045863 22.88319590454936 27.26824764425818 29.068752512146595 15 23.288671080757 28.897548144921636 25.30276096473156 22.5110198095898 16 22.18004712324528 27.89521216391893 26.57064870982878 23.354092003007008 17 21.893473211898197 26.42080284421243 26.884971855549257 24.800752088340108 18 23.210973224511488 25.099939288038737 29.095829037807913 22.59325844964187 19 23.072563407000544 24.733649394309893 30.118514457351107 22.075272741338456 20 24.11156201281174 24.136284057980763 30.012226480842095 21.7399274483654 21 22.98275679393755 24.951775194202597 30.425101452882643 21.640366558977213 22 21.75909964665975 25.369863658761776 30.0473755110484 22.82366118353007 23 22.488147713379 25.65845569624511 31.16777187102156 20.685624719354333 24 22.587372248411146 25.64718782531773 28.793951003260954 22.97148892301017 25 22.529519299172062 25.76171648354975 29.581692905109392 22.1270713121688 26 22.138339183096175 26.526418112009363 29.64122762612868 21.694015078765783 27 21.332265968843497 26.586457364562715 29.28620560332722 22.795071063266573 28 21.74194557450165 26.139274248205968 29.538303193180077 22.580476984112302 29 22.02465141075426 26.166687128223327 28.926138265185138 22.88252319583728 30 21.855969701199605 26.259184576134647 30.55358881689037 21.331256905775373 31 22.444589824271667 25.686541284974545 30.59277409936917 21.27609479138462 32 22.112271720502985 25.691250245959125 29.425288129550243 22.771189903987647 33 21.6933423700537 25.82125120456904 30.060325153755983 22.425081271621277 34 21.269367704263793 26.206208765058165 30.53626656755425 21.98815696312379 35 20.83092980116412 28.09231581655906 29.40409780511965 21.672656577157166 36 22.721745813649598 25.808637916217492 29.417383802183277 22.052232467949633 37 21.757922406413606 26.402471531808192 29.372816850007823 22.466789211770386 38 21.68493351115267 25.140638165119718 30.6428908984193 22.531537425308308 39 21.0472056520986 24.973806404523295 31.44206884837314 22.53691909500497 40 20.296126375058652 25.75028043544435 30.937369137133352 23.016224052363647 41 21.43367680718991 24.69009150520256 30.906088182021524 22.970143505586005 42 20.205478876105552 26.617906496852562 30.390961485744462 22.78565314129742 43 20.57277783290252 26.429884411825544 29.59598796524114 23.401349790030793 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 27.0 1 58.5 2 90.0 3 309.0 4 528.0 5 528.0 6 786.5 7 1045.0 8 1159.5 9 1274.0 10 1880.5 11 2487.0 12 2487.0 13 4545.5 14 6604.0 15 10251.5 16 13899.0 17 12864.0 18 11829.0 19 11829.0 20 12732.0 21 13635.0 22 10760.0 23 7885.0 24 8608.0 25 9331.0 26 9331.0 27 10151.0 28 10971.0 29 11831.5 30 12692.0 31 14145.5 32 15599.0 33 15599.0 34 17595.0 35 19591.0 36 21724.0 37 23857.0 38 25705.5 39 27554.0 40 27554.0 41 28908.5 42 30263.0 43 32778.0 44 35293.0 45 37896.5 46 40500.0 47 40500.0 48 51660.0 49 62820.0 50 60177.5 51 57535.0 52 53110.5 53 48686.0 54 48686.0 55 43575.5 56 38465.0 57 32943.5 58 27422.0 59 24195.5 60 20969.0 61 20969.0 62 18659.5 63 16350.0 64 14100.5 65 11851.0 66 10229.5 67 8608.0 68 8608.0 69 7424.0 70 6240.0 71 5208.5 72 4177.0 73 3469.0 74 2761.0 75 2761.0 76 2218.5 77 1676.0 78 1312.5 79 949.0 80 740.0 81 531.0 82 531.0 83 409.0 84 287.0 85 211.0 86 135.0 87 112.5 88 90.0 89 90.0 90 76.5 91 63.0 92 45.0 93 27.0 94 18.0 95 9.0 96 9.0 97 6.0 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 594611.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.85465638078664 #Duplication Level Percentage of deduplicated Percentage of total 1 85.51507309927165 50.32960242635484 2 8.049650736146793 9.475188561225316 3 2.296369881924026 4.054561809714785 4 1.108601522751867 2.6098544673911186 5 0.6330687161949243 1.8629520878539005 6 0.45274574392869943 1.5987717112072337 7 0.28972122465661804 1.1936010186370163 8 0.23929108925657033 1.1266715866543675 9 0.19041023688351957 1.008587615684736 >10 1.0831107739303594 11.960921601891254 >50 0.09158515055873352 3.636877357772649 >100 0.04350293933765042 4.758377801422712 >500 0.0040068496758359955 1.569899150740142 >1k 0.0022896283861919974 2.6290757451450792 >5k 5.724070965479993E-4 2.1850570583048414 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6604 1.110642083647965 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6368 1.070952269635106 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4853 0.8161638449339148 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2540 0.42717003217229416 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1491 0.2507521724286971 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1420 0.23881159278923533 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1405 0.2362889351189265 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1382 0.23242086002445297 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1361 0.22888913928602062 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1156 0.19441281779180003 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 842 0.14160518389333532 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 817 0.1374007544428206 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 781 0.13134637603407942 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 718 0.12075121381878236 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 703 0.11822855614847354 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 680 0.114360481054 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 675 0.11351959516389706 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 669 0.11251053209577354 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 638 0.10729703957713531 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 618 0.10393349601672355 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 609 0.10241990141453824 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.363543560411765E-4 0.0 0.0 0.0 0.0 8 3.363543560411765E-4 0.0 0.0 0.0 0.0 9 3.363543560411765E-4 0.0 0.0 3.363543560411765E-4 0.0 10 5.045315340617648E-4 0.0 0.0 3.363543560411765E-4 0.0 11 5.045315340617648E-4 0.0 0.0 5.045315340617648E-4 0.0 12 6.72708712082353E-4 0.0 0.0 0.0010090630681235295 0.0 13 6.72708712082353E-4 0.0 0.0 0.0010090630681235295 0.0 14 6.72708712082353E-4 0.0 0.0 0.0015135946021852943 0.0 15 6.72708712082353E-4 0.0 0.0 0.002186303314267647 0.0 16 6.72708712082353E-4 0.0 0.0 0.003363543560411765 0.0 17 6.72708712082353E-4 0.0 0.0 0.0048771381625970596 0.0 18 6.72708712082353E-4 0.0 0.0 0.005213492518638236 0.0 19 6.72708712082353E-4 0.0 0.0 0.0065589099428029415 0.0 20 6.72708712082353E-4 0.0 0.0 0.010426985037276472 0.0 21 6.72708712082353E-4 0.0 0.0 0.0171540721581 0.0 22 6.72708712082353E-4 0.0 0.0 0.02875829744152059 0.0 23 6.72708712082353E-4 0.0 0.0 0.03380361278213824 0.0 24 6.72708712082353E-4 0.0 0.0 0.04137158579306471 0.0 25 6.72708712082353E-4 0.0 0.0 0.047762318557847065 0.0 26 6.72708712082353E-4 0.0 0.0 0.06054378408741177 0.0 27 6.72708712082353E-4 0.0 0.0 0.1173876702583706 0.0 28 6.72708712082353E-4 0.0 0.0 0.22872096210800003 0.0 29 6.72708712082353E-4 0.0 0.0 0.3883211040495383 0.0 30 6.72708712082353E-4 0.0 0.0 0.6088013844345295 0.0 31 6.72708712082353E-4 0.0 0.0 0.9226199986209471 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATAGA 35 8.8643417E-4 26.42857 1 GGTATCA 2065 0.0 21.769976 1 GACCGTC 60 3.7223934E-5 21.583334 7 CGACCGC 45 0.0038236687 20.555555 10 CCGACCG 45 0.0038236687 20.555555 9 ATTAGAG 100 1.2865712E-8 20.349998 3 TTAGACC 55 5.139081E-4 20.181818 4 TGTTACG 55 5.139081E-4 20.181818 16 GTATTAG 110 3.8422513E-8 18.5 1 TGCACCG 60 9.229669E-4 18.5 5 CTATCCT 50 0.007030987 18.499998 4 TAGGTCG 50 0.007030987 18.499998 21 CATTGCG 50 0.007030987 18.499998 29 AGTTCCG 50 0.007030987 18.499998 5 ACCGTCG 50 0.007030987 18.499998 8 TAACGGC 75 2.0651534E-4 17.266666 36 TTAACGG 75 2.0651534E-4 17.266666 35 GCCTAGT 75 2.0651534E-4 17.266666 1 GGGTCGA 65 0.0015787218 17.076923 10 TGTGCGC 65 0.0015787218 17.076923 10 >>END_MODULE