##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088613_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2961774 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.69987615530422 31.0 31.0 34.0 30.0 34.0 2 31.875738999667092 31.0 31.0 34.0 30.0 34.0 3 31.948089557137042 31.0 31.0 34.0 30.0 34.0 4 35.64053840704929 37.0 35.0 37.0 33.0 37.0 5 35.550446793036876 37.0 35.0 37.0 33.0 37.0 6 35.58103116578105 37.0 35.0 37.0 33.0 37.0 7 35.45076464308215 37.0 35.0 37.0 33.0 37.0 8 35.47863071253917 37.0 35.0 37.0 33.0 37.0 9 37.0822047867258 39.0 37.0 39.0 33.0 39.0 10 36.94501065915225 39.0 37.0 39.0 33.0 39.0 11 36.99028183784448 39.0 37.0 39.0 33.0 39.0 12 36.89390513928477 39.0 37.0 39.0 33.0 39.0 13 36.94025877734088 39.0 37.0 39.0 33.0 39.0 14 37.95965998756151 40.0 37.0 41.0 33.0 41.0 15 37.92635832443664 40.0 37.0 41.0 33.0 41.0 16 37.821510351566324 40.0 37.0 41.0 32.0 41.0 17 37.86421381239757 40.0 37.0 41.0 33.0 41.0 18 37.84242045476799 40.0 37.0 41.0 32.0 41.0 19 37.86502920209307 40.0 37.0 41.0 32.0 41.0 20 37.75265769771765 40.0 37.0 41.0 32.0 41.0 21 37.65281517090771 40.0 37.0 41.0 32.0 41.0 22 37.50426129745213 39.0 36.0 41.0 32.0 41.0 23 37.37232145329117 39.0 36.0 41.0 31.0 41.0 24 37.23240868479499 39.0 36.0 41.0 31.0 41.0 25 37.03613982700908 39.0 36.0 41.0 31.0 41.0 26 37.18383846978196 39.0 36.0 41.0 31.0 41.0 27 37.10355179024463 39.0 36.0 41.0 31.0 41.0 28 36.97561967928681 39.0 36.0 41.0 31.0 41.0 29 36.82272718985311 39.0 35.0 41.0 30.0 41.0 30 36.69202984427576 39.0 35.0 40.0 30.0 41.0 31 36.499880477038424 39.0 35.0 40.0 30.0 41.0 32 36.37725667117073 38.0 35.0 40.0 30.0 41.0 33 36.17248513897414 38.0 35.0 40.0 30.0 41.0 34 36.02274920368671 38.0 35.0 40.0 29.0 41.0 35 35.840688384731585 38.0 35.0 40.0 28.0 41.0 36 35.68414875679238 38.0 35.0 40.0 27.0 41.0 37 35.51125946814308 38.0 35.0 40.0 27.0 41.0 38 35.40835053586128 38.0 34.0 40.0 26.0 41.0 39 35.25045057455431 38.0 34.0 40.0 25.0 41.0 40 35.058138804648834 38.0 34.0 40.0 24.0 41.0 41 34.908575401094076 38.0 34.0 40.0 24.0 41.0 42 34.67636997286086 38.0 33.0 40.0 23.0 41.0 43 34.30327162031944 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 2.0 12 3.0 13 5.0 14 10.0 15 14.0 16 29.0 17 93.0 18 205.0 19 459.0 20 970.0 21 2055.0 22 3780.0 23 6461.0 24 10776.0 25 16732.0 26 24686.0 27 34439.0 28 46477.0 29 61110.0 30 77655.0 31 96088.0 32 118264.0 33 146992.0 34 181437.0 35 225024.0 36 291220.0 37 413703.0 38 555642.0 39 647441.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.77341012514797 21.136487794139594 13.928915575597598 23.161186505114838 2 19.090653101823435 23.14109719377643 34.8811556857478 22.887094018652334 3 20.084516914524876 24.424483434590215 32.625480539703574 22.86551911118134 4 13.904031840376746 16.160888710617353 35.98637168129641 33.948707767709486 5 13.124465269801139 38.1732704791115 34.60399071637471 14.098273534712641 6 32.49289108487008 36.87614247407128 13.673967021116399 16.956999419942235 7 25.903968364905626 32.93137828882285 21.51723933021223 19.647414016059294 8 27.14336070206572 34.275775261718145 18.966133135073775 19.614730901142355 9 24.610891985681555 14.365782129223902 21.914973931164226 39.10835195393032 10 16.888358125906976 27.228647425495666 33.20030495236976 22.6826894962276 11 33.23940314149561 22.49800288610812 23.293168216075905 20.969425756320366 12 20.927862828156368 27.05209783055696 30.868796876466604 21.151242464820072 13 31.47691214792216 20.71609785216563 26.334960061098517 21.472029938813698 14 20.504096531335612 23.08845982171496 27.732838494766987 28.67460515218244 15 23.207780202000556 29.23690328836704 25.3671617078143 22.1881548018181 16 21.953802011902326 28.09454738950372 26.77638469376799 23.17526590482596 17 21.815168881893083 26.563471757129342 27.257481495887266 24.363877865090313 18 22.951548632677575 25.17660024026141 29.585680744040566 22.286170383020444 19 22.90529257127654 24.924319006109176 30.4934812716973 21.676907150916986 20 23.829164548004 24.436435730747856 30.249708451758977 21.484691269489165 21 22.749845194130273 25.16738279152967 30.70710324285378 21.37566877148628 22 21.590101067805982 25.679744639530227 30.418627484743944 22.311526807919847 23 22.326787931827344 25.76631437780195 31.234456106374086 20.67244158399662 24 22.40478172878822 25.86628824481544 29.059408314071227 22.669521712325114 25 22.308353034363865 25.913219577185835 30.0106287650577 21.7677986233926 26 22.059414391509954 26.555773668078658 29.97683145304132 21.40798048737007 27 21.255909465070598 26.69092915259571 29.605770055378972 22.447391326954723 28 21.512681251169063 26.461843476240926 29.740925539896025 22.284549732693986 29 21.755508691750283 26.45080279589192 29.25692507260851 22.536763439749286 30 21.651922125050728 26.558542279053025 30.82196683474161 20.96756876115463 31 22.186838023427853 26.097028335045145 30.670807428250775 21.045326213276233 32 21.867806253954555 26.04567397782545 29.655841397756884 22.43067837046311 33 21.560017746121073 26.098378876983862 30.253186097251174 22.088417279643892 34 20.925533143312084 26.565565097134353 30.556821688623103 21.952080070930464 35 20.659510144933407 28.247057337933278 29.794575818411534 21.298856698721778 36 22.460660401502615 26.150678613560657 29.688153113640674 21.700507871296054 37 21.588851816512673 26.565294988746608 29.694635714946514 22.151217479794205 38 21.356524839504974 25.3778985162271 30.96441524572773 22.3011613985402 39 20.832075641152905 25.3254974890049 31.630570056999623 22.211856812842573 40 20.065946962867525 25.935402228529252 31.23519890444038 22.763451904162842 41 21.098098639531578 24.891568364095303 31.389059394808648 22.621273601564468 42 19.958578878739566 26.639237159891337 30.786278764011026 22.615905197358067 43 20.175610968291302 26.512218690555052 30.121271913387044 23.1908984277666 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 155.0 1 352.0 2 549.0 3 1573.5 4 2598.0 5 2598.0 6 3953.0 7 5308.0 8 5916.0 9 6524.0 10 9694.5 11 12865.0 12 12865.0 13 23835.5 14 34806.0 15 54747.0 16 74688.0 17 68194.0 18 61700.0 19 61700.0 20 67037.5 21 72375.0 22 57994.0 23 43613.0 24 48922.0 25 54231.0 26 54231.0 27 57462.5 28 60694.0 29 65108.5 30 69523.0 31 75907.0 32 82291.0 33 82291.0 34 91646.0 35 101001.0 36 111535.0 37 122069.0 38 130223.5 39 138378.0 40 138378.0 41 143994.0 42 149610.0 43 161350.0 44 173090.0 45 183984.0 46 194878.0 47 194878.0 48 247542.5 49 300207.0 50 285834.0 51 271461.0 52 252742.5 53 234024.0 54 234024.0 55 209935.5 56 185847.0 57 161753.0 58 137659.0 59 121928.0 60 106197.0 61 106197.0 62 93690.5 63 81184.0 64 70798.0 65 60412.0 66 51657.0 67 42902.0 68 42902.0 69 36800.0 70 30698.0 71 25336.5 72 19975.0 73 16638.5 74 13302.0 75 13302.0 76 10478.5 77 7655.0 78 6017.5 79 4380.0 80 3348.5 81 2317.0 82 2317.0 83 1785.0 84 1253.0 85 940.5 86 628.0 87 488.0 88 348.0 89 348.0 90 295.0 91 242.0 92 164.0 93 86.0 94 59.0 95 32.0 96 32.0 97 23.0 98 14.0 99 9.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2961774.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.84688779983992 #Duplication Level Percentage of deduplicated Percentage of total 1 78.26228014757439 35.88081976885482 2 12.128839821251415 11.12139116854288 3 4.043299943969094 5.5611815661675035 4 1.7428656305653798 3.1961986005891294 5 0.921130822398144 2.1115490731730993 6 0.5553456865354429 1.527652282842931 7 0.34868901462468455 1.119041429137426 8 0.25767714219500265 0.9450956021438146 9 0.19420348723373887 0.8013262940588582 >10 1.2604035700966174 11.293506099894582 >50 0.15687923795314512 5.055942035487566 >100 0.1150968430978529 10.264050832087872 >500 0.008047017350239731 2.5423725429777866 >1k 0.004503376682238916 3.6560694057981893 >5k 4.429550834989098E-4 1.2932205730224335 >10k+ 2.9530338899927324E-4 3.630582725221193 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 36553 1.2341589871475676 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31834 1.0748288019274934 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25309 0.8545216481743713 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13569 0.4581375891610906 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6864 0.23175299668374427 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6831 0.23063879958430317 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6540 0.22081360698014096 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6301 0.21274411889631012 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6128 0.20690302501136143 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5544 0.18718511270610114 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3912 0.13208300160646963 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3627 0.12246039029311488 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3577 0.12077221286971929 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3551 0.11989436060955361 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3430 0.11580897124493632 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3275 0.11057562123241005 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3264 0.11020422219926301 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 3.3763548467911463E-5 0.0 0.0 0.0 0.0 6 3.3763548467911463E-5 0.0 0.0 0.0 0.0 7 6.752709693582293E-5 0.0 0.0 0.0 0.0 8 6.752709693582293E-5 0.0 0.0 0.0 0.0 9 1.0129064540373438E-4 0.0 0.0 1.6881774233955732E-4 0.0 10 1.3505419387164585E-4 0.0 0.0 3.3763548467911463E-4 0.0 11 2.0258129080746875E-4 0.0 0.0 4.3892613008284897E-4 0.0 12 2.0258129080746875E-4 0.0 0.0 8.10325163229875E-4 0.0 13 2.3634483927538022E-4 0.0 0.0 9.116158086336095E-4 0.0 14 2.701083877432917E-4 0.0 0.0 0.0011479606479089896 0.0 15 2.701083877432917E-4 0.0 0.0 0.0014518325841201929 0.0 16 3.0387193621120317E-4 0.0 0.0 0.0021608671019463337 0.0 17 3.0387193621120317E-4 0.0 0.0 0.002869901619772474 0.0 18 3.0387193621120317E-4 0.0 0.0 0.003308827749855323 0.0 19 3.3763548467911463E-4 0.0 0.0 0.004254207106956844 0.0 20 3.3763548467911463E-4 0.0 0.0 0.0070228180813255835 0.0 21 3.3763548467911463E-4 0.0 0.0 0.012661330675466797 0.0 22 3.3763548467911463E-4 0.0 0.0 0.02103469069550884 0.0 23 3.3763548467911463E-4 0.0 0.0 0.025829114577952266 0.0 24 3.713990331470261E-4 0.0 0.0 0.034134947501058485 3.3763548467911463E-5 25 3.713990331470261E-4 0.0 0.0 0.0397734600951997 3.3763548467911463E-5 26 3.713990331470261E-4 0.0 0.0 0.04990252463557314 3.3763548467911463E-5 27 4.051625816149375E-4 0.0 0.0 0.10655775896472858 3.3763548467911463E-5 28 4.051625816149375E-4 0.0 0.0 0.22824158764308147 3.3763548467911463E-5 29 4.051625816149375E-4 0.0 0.0 0.38433047221023614 3.3763548467911463E-5 30 4.051625816149375E-4 0.0 0.0 0.6003158917594658 3.3763548467911463E-5 31 4.051625816149375E-4 0.0 0.0 0.9004400740907308 3.3763548467911463E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11345 0.0 22.111942 1 TATACCG 210 0.0 18.500002 5 ACCGTTA 655 0.0 18.35878 8 GACCGTT 705 0.0 17.056738 7 GGACCGT 860 0.0 16.994186 6 GTATTAG 480 0.0 16.1875 1 CGTTATT 435 0.0 16.160921 10 TGTTACG 435 0.0 16.160921 16 GTATTGG 1450 0.0 15.310344 1 GTATCAA 16900 0.0 14.821893 2 ATTGGAC 1540 0.0 14.775973 3 TTGGACC 2000 0.0 14.5225 4 CTAATAC 510 0.0 14.509804 3 ATACACA 1110 0.0 14.5 37 CCGTTAT 815 0.0 14.300614 9 CGCCGTT 790 0.0 14.28481 25 CCGTTTA 795 0.0 14.194969 27 TAGTACT 540 0.0 14.046297 4 CGTTTAC 810 0.0 13.932098 28 AGTTCCG 390 0.0 13.756409 32 >>END_MODULE