##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088612_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3126338 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.726624568424782 31.0 31.0 34.0 30.0 34.0 2 31.89919835923051 31.0 31.0 34.0 30.0 34.0 3 31.97525123643061 31.0 31.0 34.0 30.0 34.0 4 35.65374537238136 37.0 35.0 37.0 33.0 37.0 5 35.56334567791455 37.0 35.0 37.0 33.0 37.0 6 35.60271250261488 37.0 35.0 37.0 33.0 37.0 7 35.477321709936675 37.0 35.0 37.0 33.0 37.0 8 35.500307388388585 37.0 35.0 37.0 33.0 37.0 9 37.11269031051665 39.0 37.0 39.0 33.0 39.0 10 36.98614641155243 39.0 37.0 39.0 33.0 39.0 11 37.02476283754348 39.0 37.0 39.0 33.0 39.0 12 36.928985925386186 39.0 37.0 39.0 33.0 39.0 13 36.975475140563816 39.0 37.0 39.0 33.0 39.0 14 38.01372020555679 40.0 37.0 41.0 33.0 41.0 15 37.97638323175549 40.0 37.0 41.0 33.0 41.0 16 37.87340876130476 40.0 37.0 41.0 32.0 41.0 17 37.90693520662193 40.0 37.0 41.0 33.0 41.0 18 37.88515733103714 40.0 37.0 41.0 33.0 41.0 19 37.90205089788756 40.0 37.0 41.0 32.0 41.0 20 37.793517207672366 40.0 37.0 41.0 32.0 41.0 21 37.69231349905225 40.0 37.0 41.0 32.0 41.0 22 37.54756363515397 39.0 36.0 41.0 32.0 41.0 23 37.42940814460881 39.0 36.0 41.0 32.0 41.0 24 37.29049770050455 39.0 36.0 41.0 31.0 41.0 25 37.09495550385147 39.0 36.0 41.0 31.0 41.0 26 37.253382711658176 39.0 36.0 41.0 31.0 41.0 27 37.18153187531227 39.0 36.0 41.0 31.0 41.0 28 37.06605779669377 39.0 36.0 41.0 31.0 41.0 29 36.917978798197765 39.0 35.0 41.0 31.0 41.0 30 36.786859578203 39.0 35.0 41.0 30.0 41.0 31 36.60700794347892 39.0 35.0 40.0 30.0 41.0 32 36.48791397475257 39.0 35.0 40.0 30.0 41.0 33 36.290133056630474 38.0 35.0 40.0 30.0 41.0 34 36.1469185353599 38.0 35.0 40.0 30.0 41.0 35 35.9463858354407 38.0 35.0 40.0 29.0 41.0 36 35.7880072468172 38.0 35.0 40.0 28.0 41.0 37 35.62272921226048 38.0 35.0 40.0 27.0 41.0 38 35.52751781797106 38.0 35.0 40.0 26.0 41.0 39 35.38864031976069 38.0 34.0 40.0 25.0 41.0 40 35.197706070169 38.0 34.0 40.0 25.0 41.0 41 35.057029342316795 38.0 34.0 40.0 24.0 41.0 42 34.826524195400495 38.0 34.0 40.0 23.0 41.0 43 34.46898352001607 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 5.0 14 16.0 15 24.0 16 42.0 17 99.0 18 192.0 19 481.0 20 1017.0 21 2042.0 22 3916.0 23 6641.0 24 11125.0 25 17098.0 26 24905.0 27 35151.0 28 48352.0 29 62686.0 30 79638.0 31 97991.0 32 121938.0 33 151103.0 34 186854.0 35 232224.0 36 304630.0 37 433220.0 38 594376.0 39 710571.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.894670377930986 21.1053315412473 13.822593718273584 23.17740436254813 2 18.910079460378245 23.029979483984135 35.29148159923847 22.76845945639915 3 19.933993061530774 24.74297404823151 32.27056703401872 23.052465856219 4 13.858674270024546 16.083993477352738 36.16531545853328 33.89201679408944 5 13.11537652038903 38.11072251304881 34.739525924580136 14.034375041982026 6 32.46837034255413 36.74618675267997 13.771127753940874 17.014315150825023 7 26.04196987018038 32.75666290720965 21.679293793569347 19.52207342904062 8 26.807178238565378 34.55330165836196 19.074648998284893 19.564871104787773 9 24.36169729568588 14.618540925517332 22.082737055302402 38.93702472349439 10 16.82454040478029 27.05273710008323 33.37838071251413 22.744341782622353 11 32.932107788729176 22.376947086335512 23.592714543341124 21.098230581594184 12 20.957394881807407 26.987804901453394 30.90791846562976 21.146881751109444 13 31.313152960428464 20.705214855207593 26.468923065900103 21.51270911846384 14 20.49077866820542 22.884569742619 27.739387104017542 28.885264485158036 15 23.113079903708428 29.14377780009711 25.499354196507223 22.243788099687237 16 21.992599648534483 28.07070124855342 26.69369082933451 23.243008273577583 17 21.7459212663506 26.528513551637733 27.16529690647652 24.560268275535147 18 23.00352680996105 25.259169034186325 29.477011122917613 22.260293032935017 19 22.874206179882023 24.77963035346786 30.46462026818597 21.881543198464147 20 23.815115320224493 24.296925028579764 30.304176963591267 21.583782687604476 21 22.65945012983241 25.25625828045464 30.681903236310344 21.402388353402607 22 21.541144943381042 25.69402284717775 30.224371133255584 22.54046107618562 23 22.260932759029895 25.813299777567238 31.198705962055286 20.72706150134758 24 22.41542661094226 25.921989241086536 28.906343459984175 22.75624068798703 25 22.355612221071425 25.931265269462227 29.800584581705497 21.91253792776085 26 22.148980692426733 26.632724932492902 29.875080685453714 21.34321368962665 27 21.30044800018424 26.72887576455265 29.44691201015373 22.523764225109378 28 21.434598562279575 26.411955457151464 29.797449923840606 22.35599605672835 29 21.936239779575978 26.302274418185114 29.176691707678444 22.584794094560472 30 21.655815845887425 26.44825991303563 30.79084859026759 21.10507565080935 31 22.284570638235532 25.996357399615782 30.65535460337302 21.063717358775666 32 21.81386017762635 25.859743892055175 29.62824237174611 22.69815355857236 33 21.547766108463 26.008991989989568 30.242283463912088 22.200958437635343 34 21.010971942253203 26.404438675536685 30.692746593618477 21.891842788591635 35 20.71266766421289 28.209521811141343 29.61333675373552 21.464473770910246 36 22.470155178358834 26.09202843710437 29.682107308934608 21.75570907560219 37 21.59453008599838 26.50516354917479 29.613784562001932 22.2865218028249 38 21.3965348596345 25.209238412481312 30.991338748401486 22.402887979482706 39 20.86124404974766 25.09984525025765 31.623164226004995 22.4157464739897 40 19.97032950371969 25.951512600365028 31.233027267045344 22.845130628869942 41 21.18750435813402 24.769202818121393 31.33563933266333 22.70765349108126 42 19.848717573083906 26.70258302205328 30.803899002603046 22.64480040225977 43 20.184285896150705 26.46949881938549 30.055675362036986 23.290539922426813 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 187.0 1 434.5 2 682.0 3 1742.0 4 2802.0 5 2802.0 6 4426.5 7 6051.0 8 6561.0 9 7071.0 10 10520.5 11 13970.0 12 13970.0 13 24911.5 14 35853.0 15 55242.5 16 74632.0 17 68628.5 18 62625.0 19 62625.0 20 67343.5 21 72062.0 22 57135.5 23 42209.0 24 47126.0 25 52043.0 26 52043.0 27 56464.5 28 60886.0 29 66831.0 30 72776.0 31 79777.0 32 86778.0 33 86778.0 34 97104.0 35 107430.0 36 119062.5 37 130695.0 38 140769.5 39 150844.0 40 150844.0 41 156754.5 42 162665.0 43 175721.5 44 188778.0 45 200826.0 46 212874.0 47 212874.0 48 269386.0 49 325898.0 50 309955.5 51 294013.0 52 273008.5 53 252004.0 54 252004.0 55 225334.0 56 198664.0 57 169290.0 58 139916.0 59 123821.0 60 107726.0 61 107726.0 62 95142.5 63 82559.0 64 70888.5 65 59218.0 66 50610.5 67 42003.0 68 42003.0 69 35850.0 70 29697.0 71 24916.0 72 20135.0 73 16671.0 74 13207.0 75 13207.0 76 10501.0 77 7795.0 78 6061.5 79 4328.0 80 3389.5 81 2451.0 82 2451.0 83 1857.0 84 1263.0 85 972.0 86 681.0 87 536.5 88 392.0 89 392.0 90 338.0 91 284.0 92 189.0 93 94.0 94 82.5 95 71.0 96 71.0 97 44.0 98 17.0 99 13.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3126338.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.772630742303086 #Duplication Level Percentage of deduplicated Percentage of total 1 78.82028593484863 36.07811843098571 2 11.610049884522867 10.628450525279675 3 3.842439403798071 5.276356799391729 4 1.6849011114660435 3.08489425649725 5 0.919957620049857 2.105444022055503 6 0.5675624557130035 1.5587296025127633 7 0.386091653917349 1.2370701495210725 8 0.2764107245462181 1.0121636822293194 9 0.21732556613363413 0.8952806600547123 >10 1.4010491989944818 12.349559394466308 >50 0.15159426515182708 4.806777304298779 >100 0.10850545116225813 9.541317781019389 >500 0.008632932754252748 2.727609261980787 >1k 0.004491932489991033 3.8882318525382584 >5k 4.2111867093665926E-4 1.3433884420865885 >10k+ 2.8074578062443954E-4 3.4666078350821556 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 35966 1.150419436414105 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 32464 1.0384033972014544 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25645 0.8202887851537486 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13831 0.4424025809109572 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7734 0.2473820808882469 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7657 0.2449191354229773 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7401 0.2367306414085745 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6942 0.22204892753118827 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6410 0.20503221340750744 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5672 0.1814263205066119 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4404 0.14086768609152306 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3971 0.1270176161374746 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3809 0.12183583476898531 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 3588 0.11476686142061415 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3527 0.11281569683124473 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3524 0.11271973791701345 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3523 0.1126877516122697 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3487 0.1115362446414943 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3414 0.10920124439519976 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.198630474376091E-5 0.0 0.0 0.0 0.0 2 3.198630474376091E-5 0.0 0.0 0.0 0.0 3 3.198630474376091E-5 0.0 0.0 0.0 0.0 4 3.198630474376091E-5 0.0 0.0 0.0 0.0 5 3.198630474376091E-5 0.0 0.0 0.0 0.0 6 1.5993152371880455E-4 0.0 0.0 0.0 0.0 7 1.5993152371880455E-4 0.0 0.0 0.0 0.0 8 1.5993152371880455E-4 0.0 0.0 6.397260948752182E-5 0.0 9 1.9191782846256548E-4 0.0 0.0 2.5589043795008727E-4 0.0 10 2.2390413320632637E-4 0.0 0.0 2.878767426938482E-4 0.0 11 2.5589043795008727E-4 3.198630474376091E-5 0.0 5.757534853876964E-4 0.0 12 3.198630474376091E-4 3.198630474376091E-5 0.0 9.915754470565883E-4 0.0 13 3.198630474376091E-4 3.198630474376091E-5 0.0 0.0011515069707753929 0.0 14 3.8383565692513095E-4 3.198630474376091E-5 0.0 0.0015353426277005238 0.0 15 3.8383565692513095E-4 3.198630474376091E-5 0.0 0.00175924676090685 0.0 16 3.8383565692513095E-4 3.198630474376091E-5 0.0 0.002526918074757112 0.0 17 3.8383565692513095E-4 3.198630474376091E-5 0.0 0.003582466131301222 0.0 18 4.1582196166889185E-4 3.198630474376091E-5 0.0 0.004254178530920201 0.0 19 4.1582196166889185E-4 3.198630474376091E-5 0.0 0.005789521158620725 0.0 20 4.1582196166889185E-4 3.198630474376091E-5 0.0 0.009084110547228099 0.0 21 4.1582196166889185E-4 3.198630474376091E-5 0.0 0.015705275629186607 0.0 22 5.117808759001745E-4 3.198630474376091E-5 0.0 0.025812947928215056 0.0 23 5.117808759001745E-4 3.198630474376091E-5 0.0 0.03304185280030502 0.0 24 5.437671806439355E-4 3.198630474376091E-5 0.0 0.044524936203315185 0.0 25 5.437671806439355E-4 3.198630474376091E-5 0.0 0.05242555347502413 0.0 26 5.437671806439355E-4 3.198630474376091E-5 0.0 0.0637487053543155 0.0 27 5.437671806439355E-4 3.198630474376091E-5 0.0 0.12199576629270412 0.0 28 5.437671806439355E-4 3.198630474376091E-5 0.0 0.2511244785432669 0.0 29 5.437671806439355E-4 3.198630474376091E-5 0.0 0.4168455234206922 0.0 30 5.437671806439355E-4 3.198630474376091E-5 0.0 0.6510812330592534 0.0 31 5.437671806439355E-4 3.198630474376091E-5 0.0 0.997492913434184 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11905 0.0 20.854261 1 ACCGTTA 545 0.0 17.651377 8 GTATTGG 1580 0.0 16.977848 1 TTGGACC 2370 0.0 16.314346 4 CTCTAAT 620 0.0 16.112904 1 ATTAGAG 595 0.0 15.857142 3 GTATTAG 740 0.0 15.500001 1 ATTGGAC 1985 0.0 15.377834 3 TGGACCC 2250 0.0 15.375556 5 CCGTTTA 585 0.0 15.179487 27 TCGGGTA 355 0.0 15.112677 25 TTAACGG 490 0.0 15.10204 35 TAGGGGT 270 0.0 15.074075 4 GGACCGT 760 0.0 14.848684 6 GGACCCT 2450 0.0 14.648979 6 TATACCG 230 1.8189894E-12 14.478261 5 TAATACT 720 0.0 14.131945 4 GTATCAA 17630 0.0 14.113727 2 ATACTGG 715 0.0 13.972027 6 TCTAATA 715 0.0 13.972027 2 >>END_MODULE