##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088610_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3630973 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.726604136136512 31.0 31.0 34.0 30.0 34.0 2 31.90213752622231 31.0 31.0 34.0 30.0 34.0 3 31.97040242381312 31.0 31.0 34.0 30.0 34.0 4 35.65896551695647 37.0 35.0 37.0 33.0 37.0 5 35.56638234434682 37.0 35.0 37.0 33.0 37.0 6 35.60095406933623 37.0 35.0 37.0 33.0 37.0 7 35.473748496615094 37.0 35.0 37.0 33.0 37.0 8 35.49712928187569 37.0 35.0 37.0 33.0 37.0 9 37.109454683358976 39.0 37.0 39.0 33.0 39.0 10 36.973641775909655 39.0 37.0 39.0 33.0 39.0 11 37.020369471213364 39.0 37.0 39.0 33.0 39.0 12 36.922301818272956 39.0 37.0 39.0 33.0 39.0 13 36.970008314575736 39.0 37.0 39.0 33.0 39.0 14 38.01251345025149 40.0 37.0 41.0 33.0 41.0 15 37.97197941157921 40.0 37.0 41.0 33.0 41.0 16 37.86536639077184 40.0 37.0 41.0 32.0 41.0 17 37.900445693206755 40.0 37.0 41.0 33.0 41.0 18 37.87762674082126 40.0 37.0 41.0 33.0 41.0 19 37.90227220086737 40.0 37.0 41.0 32.0 41.0 20 37.78224624639181 40.0 37.0 41.0 32.0 41.0 21 37.68422541285766 40.0 37.0 41.0 32.0 41.0 22 37.53920478064695 39.0 36.0 41.0 32.0 41.0 23 37.414827650880355 39.0 36.0 41.0 32.0 41.0 24 37.27620034629836 39.0 36.0 41.0 31.0 41.0 25 37.07836522056209 39.0 36.0 41.0 31.0 41.0 26 37.23295050665483 39.0 36.0 41.0 31.0 41.0 27 37.16133031008493 39.0 36.0 41.0 31.0 41.0 28 37.04060674645611 39.0 36.0 41.0 31.0 41.0 29 36.89860927084834 39.0 35.0 41.0 30.0 41.0 30 36.77378377641475 39.0 35.0 41.0 30.0 41.0 31 36.59150839182775 39.0 35.0 40.0 30.0 41.0 32 36.47710352018591 39.0 35.0 40.0 30.0 41.0 33 36.28388533872326 38.0 35.0 40.0 30.0 41.0 34 36.144244256291636 38.0 35.0 40.0 30.0 41.0 35 35.96065710210459 38.0 35.0 40.0 29.0 41.0 36 35.82008872002078 38.0 35.0 40.0 28.0 41.0 37 35.653960247019185 38.0 35.0 40.0 27.0 41.0 38 35.56394801062966 38.0 35.0 40.0 26.0 41.0 39 35.429608262027834 38.0 34.0 40.0 26.0 41.0 40 35.25008998965291 38.0 34.0 40.0 25.0 41.0 41 35.11509587099656 38.0 34.0 40.0 24.0 41.0 42 34.89792598292524 38.0 34.0 40.0 23.0 41.0 43 34.529486724357355 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 1.0 11 4.0 12 5.0 13 8.0 14 17.0 15 27.0 16 56.0 17 114.0 18 274.0 19 564.0 20 1212.0 21 2430.0 22 4393.0 23 7845.0 24 12597.0 25 20076.0 26 28678.0 27 40073.0 28 54776.0 29 72499.0 30 92110.0 31 114414.0 32 141538.0 33 176103.0 34 218954.0 35 271198.0 36 353450.0 37 501567.0 38 692784.0 39 823205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.7719437737488 20.98787294755428 13.779777486640633 23.46040579205629 2 19.145749637906974 22.708265800929944 35.15170726964921 22.994277291513875 3 19.89048114651362 24.462286004329968 32.22874419611493 23.418488653041486 4 13.895696828370799 16.13427034571725 35.982751730734435 33.987281095177515 5 13.143942408825405 37.90052969272975 34.89144645250736 14.064081445937493 6 32.65653586517994 36.678212699461 13.685918347506302 16.979333087852762 7 26.26004104134071 32.563392787553084 21.630620772999414 19.545945398106788 8 26.747073029736107 34.62430042856281 18.92181517185614 19.706811369844942 9 24.545238975888832 14.456317907073393 21.726049739284758 39.27239337775302 10 17.010426681773726 26.857924859259484 33.337895930374586 22.793752528592197 11 33.38768974597167 22.258744419195626 23.26712426669105 21.08644156814165 12 21.067107907439684 26.845118374606475 30.710445932811947 21.37732778514189 13 31.3179690402545 20.682224847169064 26.21583801366741 21.783968098909025 14 20.689743492997607 22.71842836617072 27.39819326665332 29.193634874178354 15 23.294224440666454 28.94987101253576 25.351469151657145 22.40443539514064 16 22.209391256833914 27.903512364316676 26.581800525644226 23.305295853205187 17 21.980003706995344 26.490750550885394 26.890147627096102 24.639098115023163 18 23.084280714838695 25.18509501447684 29.24017887216457 22.490445398519903 19 23.18439162174987 24.586026940987992 30.1517251711869 22.077856266075237 20 23.954956426280226 24.190733448031697 30.099314977004788 21.754995148683285 21 22.93007962328555 25.00880617950065 30.420303318146402 21.640810879067402 22 21.754444332139073 25.50679941712593 30.000443407318095 22.738312843416903 23 22.51528722466402 25.690414112140193 31.001084282367287 20.793214380828502 24 22.621512195215992 25.726630299922366 28.624806628966947 23.027050875894698 25 22.60297721850314 25.65667659880699 29.666703663177884 22.07364251951199 26 22.26458307456431 26.355111976872315 29.669182337626854 21.711122610936517 27 21.491236646485667 26.460317936817486 29.224535682308844 22.823909734388 28 21.752020739344523 26.060452666544204 29.54929711677834 22.638229477332935 29 22.09355453758538 26.106473388813413 28.98360852586896 22.816363547732248 30 21.99867638784425 26.17400349713424 30.456106393520415 21.371213721501096 31 22.43613488726025 25.751389503584853 30.448477584383028 21.36399802477187 32 22.11938783350909 25.68727445783816 29.39672093403063 22.79661677462212 33 21.740839163496947 25.761717313788896 30.037293034126115 22.460150488588045 34 21.21158708698743 26.15778194990709 30.534212179490183 22.096418783615302 35 20.998310921067162 27.881452161720837 29.435553500397827 21.68468341681417 36 22.8093406367935 25.692424592526574 29.444752136686226 22.0534826339937 37 21.785675630196096 26.213111471773544 29.44271411547263 22.558498782557734 38 21.703934455034503 24.95259535116345 30.737160535206403 22.606309658595645 39 21.171707969186222 24.91015493643164 31.36368681342439 22.55445028095775 40 20.34327988668602 25.616632236042513 30.981833244146955 23.05825463312451 41 21.44034119780015 24.469997435948986 31.098303402421333 22.991357963829532 42 20.211497028482448 26.407136599473475 30.50110810518283 22.880258266861254 43 20.59315781196941 26.085597441787645 29.85312752256764 23.468117223675307 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 199.0 1 412.0 2 625.0 3 1789.5 4 2954.0 5 2954.0 6 4541.5 7 6129.0 8 6679.5 9 7230.0 10 10773.0 11 14316.0 12 14316.0 13 26490.0 14 38664.0 15 59672.0 16 80680.0 17 74428.0 18 68176.0 19 68176.0 20 74288.0 21 80400.0 22 63375.5 23 46351.0 24 51851.5 25 57352.0 26 57352.0 27 63374.5 28 69397.0 29 76167.0 30 82937.0 31 91944.0 32 100951.0 33 100951.0 34 112940.5 35 124930.0 36 138468.5 37 152007.0 38 163681.0 39 175355.0 40 175355.0 41 183566.5 42 191778.0 43 206691.5 44 221605.0 45 234250.0 46 246895.0 47 246895.0 48 309047.5 49 371200.0 50 354389.5 51 337579.0 52 314489.5 53 291400.0 54 291400.0 55 260533.5 56 229667.0 57 198375.0 58 167083.0 59 149406.5 60 131730.0 61 131730.0 62 116764.0 63 101798.0 64 87867.0 65 73936.0 66 63822.0 67 53708.0 68 53708.0 69 46261.0 70 38814.0 71 32617.5 72 26421.0 73 21675.5 74 16930.0 75 16930.0 76 13416.5 77 9903.0 78 7739.0 79 5575.0 80 4325.0 81 3075.0 82 3075.0 83 2266.0 84 1457.0 85 1149.5 86 842.0 87 648.0 88 454.0 89 454.0 90 376.0 91 298.0 92 197.0 93 96.0 94 71.5 95 47.0 96 47.0 97 33.0 98 19.0 99 14.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3630973.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.92770913314128 #Duplication Level Percentage of deduplicated Percentage of total 1 76.86996999340847 32.99851712950337 2 12.391228710717007 10.638541237917778 3 4.199850995412908 5.4086994580085745 4 1.9097458555698117 3.279240584244916 5 1.0627434680486558 2.281057123976926 6 0.6481877360103568 1.6695128757073179 7 0.465335161735348 1.3983040730678788 8 0.3319499722100467 1.1399881483029772 9 0.2569225425531029 0.9926186558820044 >10 1.5592587615999556 13.032830491172708 >50 0.17075759964335507 5.094622672087298 >100 0.118021442151351 9.97637969888812 >500 0.009784014710944823 2.949376955891082 >1k 0.0056000610505912984 4.505524363160513 >5k 3.8621110693733086E-4 1.3049455311067943 >10k+ 2.574740712915539E-4 3.3298410010817445 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39392 1.0848882654869645 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 37605 1.0356728072613044 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 28447 0.783453911665 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15063 0.41484748027594803 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8645 0.2380904512371753 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8303 0.22867148833108925 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8054 0.22181382235560548 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 8007 0.22051940347669893 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7728 0.21283551268489193 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6489 0.17871242777073804 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4620 0.12723862171379408 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4470 0.12310749763217738 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4196 0.11556131097642422 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4095 0.11277968742813564 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4033 0.11107215614106743 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3835 0.1056190723533334 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3759 0.10352596948531427 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 2.7540827210777938E-5 0.0 0.0 0.0 0.0 6 2.7540827210777938E-5 0.0 0.0 0.0 0.0 7 2.7540827210777938E-5 0.0 0.0 0.0 0.0 8 5.5081654421555876E-5 0.0 0.0 0.0 0.0 9 5.5081654421555876E-5 0.0 0.0 1.1016330884311175E-4 0.0 10 8.262248163233381E-5 0.0 0.0 2.203266176862235E-4 0.0 11 1.1016330884311175E-4 0.0 0.0 4.1311240816166905E-4 0.0 12 1.1016330884311175E-4 0.0 0.0 7.160615074802264E-4 0.0 13 1.1016330884311175E-4 0.0 0.0 8.81306470744894E-4 0.0 14 1.6524496326466762E-4 0.0 0.0 0.0010465514340095615 0.0 15 1.6524496326466762E-4 0.0 0.0 0.001321959706117341 0.0 16 1.9278579047544555E-4 0.0 0.0 0.0020104803863867896 0.0 17 1.9278579047544555E-4 0.0 0.0 0.0028642460299209056 0.0 18 2.203266176862235E-4 0.0 0.0 0.0033324400925041305 0.0 19 2.4786744489700143E-4 0.0 0.0 0.004296369044881359 0.0 20 2.4786744489700143E-4 0.0 0.0 0.0071055334203807075 0.0 21 2.4786744489700143E-4 0.0 0.0 0.011980259836688403 0.0 22 2.754082721077794E-4 0.0 0.0 0.020490375444818784 0.0 23 2.754082721077794E-4 0.0 0.0 0.02547526516996959 0.0 24 2.754082721077794E-4 0.0 2.7540827210777938E-5 0.03431587070462931 0.0 25 2.754082721077794E-4 0.0 2.7540827210777938E-5 0.04023714855494657 0.0 26 2.754082721077794E-4 0.0 2.7540827210777938E-5 0.05020692800524818 0.0 27 3.029490993185573E-4 0.0 2.7540827210777938E-5 0.10487547001864239 0.0 28 3.3048992652933524E-4 0.0 5.5081654421555876E-5 0.23280261241270592 0.0 29 3.3048992652933524E-4 0.0 5.5081654421555876E-5 0.3894548375876108 0.0 30 3.3048992652933524E-4 0.0 8.262248163233381E-5 0.6080739239867661 0.0 31 3.3048992652933524E-4 0.0 8.262248163233381E-5 0.92223213998011 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12405 0.0 23.503426 1 ACGTTTA 150 0.0 20.966667 26 GTATTGG 1805 0.0 18.141273 1 ACCGTTA 870 0.0 16.160921 8 CTAATAC 760 0.0 16.06579 3 GTATTAG 900 0.0 15.827778 1 TTAACGG 635 0.0 15.732284 35 ATTGGAC 2145 0.0 15.610723 3 CGTTTAC 830 0.0 15.602409 28 GACCGTT 890 0.0 15.589889 7 GTATCAA 18765 0.0 15.537437 2 CCGTTTA 850 0.0 15.45294 27 TTGGACC 2615 0.0 15.210325 4 TGGACCC 2610 0.0 14.955939 5 CTCTAAT 720 0.0 14.902779 1 GCCGTTT 895 0.0 14.675978 26 TCTAATA 775 0.0 14.56129 2 CGCCGTT 920 0.0 14.47826 25 TAATACT 895 0.0 14.4692745 4 AATACTG 910 0.0 14.434066 5 >>END_MODULE