##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088607_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 808910 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.735787664882373 31.0 31.0 34.0 30.0 34.0 2 31.908764881136342 31.0 31.0 34.0 30.0 34.0 3 31.977486988663756 33.0 31.0 34.0 30.0 34.0 4 35.65477741652347 37.0 35.0 37.0 33.0 37.0 5 35.58075682090715 37.0 35.0 37.0 33.0 37.0 6 35.631345885203544 37.0 35.0 37.0 33.0 37.0 7 35.485793227924 37.0 35.0 37.0 33.0 37.0 8 35.529715295892004 37.0 35.0 37.0 33.0 37.0 9 37.135097847721006 39.0 37.0 39.0 33.0 39.0 10 37.00881062170081 39.0 37.0 39.0 33.0 39.0 11 37.05419267903722 39.0 37.0 39.0 33.0 39.0 12 36.951884634879036 39.0 37.0 39.0 33.0 39.0 13 36.98814701264665 39.0 37.0 39.0 33.0 39.0 14 37.99355676156804 40.0 37.0 41.0 33.0 41.0 15 37.959692672856065 40.0 37.0 41.0 33.0 41.0 16 37.849544448702574 40.0 37.0 41.0 32.0 41.0 17 37.91765214918841 40.0 37.0 41.0 33.0 41.0 18 37.9066533977822 40.0 37.0 41.0 33.0 41.0 19 37.9414693847276 40.0 37.0 41.0 33.0 41.0 20 37.82914415695195 40.0 37.0 41.0 32.0 41.0 21 37.73080317958735 40.0 37.0 41.0 32.0 41.0 22 37.572500030905786 39.0 36.0 41.0 32.0 41.0 23 37.42944703366258 39.0 36.0 41.0 32.0 41.0 24 37.28820264306289 39.0 36.0 41.0 31.0 41.0 25 37.08364465762569 39.0 36.0 41.0 31.0 41.0 26 37.21095795576764 39.0 36.0 41.0 31.0 41.0 27 37.13768651642334 39.0 36.0 41.0 31.0 41.0 28 36.982895501353674 39.0 35.0 41.0 31.0 41.0 29 36.833229901966845 39.0 35.0 41.0 30.0 41.0 30 36.67164455872717 39.0 35.0 40.0 30.0 41.0 31 36.454494319516385 39.0 35.0 40.0 30.0 41.0 32 36.307915590115094 38.0 35.0 40.0 30.0 41.0 33 36.066405409748924 38.0 35.0 40.0 30.0 41.0 34 35.893754558603554 38.0 35.0 40.0 29.0 41.0 35 35.680823577406635 38.0 35.0 40.0 27.0 41.0 36 35.513434127406015 38.0 35.0 40.0 27.0 41.0 37 35.310617992112846 38.0 34.0 40.0 26.0 41.0 38 35.19217959970825 38.0 34.0 40.0 25.0 41.0 39 35.015394790520574 38.0 34.0 40.0 24.0 41.0 40 34.80490536648082 38.0 34.0 40.0 23.0 41.0 41 34.63561830117071 38.0 33.0 40.0 23.0 41.0 42 34.35438676737832 38.0 33.0 40.0 21.0 41.0 43 33.96862939016702 38.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 3.0 15 3.0 16 13.0 17 24.0 18 48.0 19 140.0 20 302.0 21 542.0 22 1070.0 23 1796.0 24 2967.0 25 4575.0 26 6725.0 27 9468.0 28 13063.0 29 17192.0 30 21509.0 31 26334.0 32 31907.0 33 39988.0 34 49687.0 35 61860.0 36 80300.0 37 117206.0 38 150545.0 39 171640.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.18788245911164 20.94905490103967 14.280945964322358 22.582116675526326 2 19.081356393171056 23.036555364626473 35.419762396311086 22.462325845891385 3 20.225241374194905 24.64748859576467 32.62093434374652 22.5063356862939 4 14.039509957844507 16.070267396867386 35.45363513864336 34.43658750664474 5 12.999715666761444 38.0924948387336 34.57059499820747 14.337194496297487 6 32.40854977686022 36.13059549270005 13.443028272613763 18.017826457825965 7 25.677640281366283 32.9641122003684 21.599559901595974 19.758687616669345 8 26.95046420491773 34.443634026035035 18.821253291466295 19.784648477580944 9 24.123079205350408 14.580361226836114 22.398907171378767 38.89765239643471 10 17.172985869874275 26.950216958623336 32.88833121113598 22.98846596036642 11 32.68954519044146 22.121373205919078 23.664437329245526 21.524644274393935 12 21.12361078488336 27.27126627189675 30.78921017171255 20.815912771507335 13 32.01196672064878 20.637648193247703 26.635348802709817 20.715036283393705 14 20.339221915911534 23.39444437576492 27.87108578210184 28.395247926221707 15 22.858538032661237 29.084199725556616 25.996464377990137 22.06079786379202 16 21.56506904352771 28.02957065680978 27.204015279820993 23.201345019841515 17 21.609820622813416 26.349532086387857 27.181515867030942 24.859131423767785 18 23.1828015477618 24.923168214016393 29.83459222904897 22.059438009172837 19 22.891792659257522 24.399871431926915 30.994053726619775 21.71428218219579 20 23.989195336934888 23.714133834419158 31.02001458753137 21.276656241114587 21 22.626002892781642 24.86543620427489 31.55678629266544 20.95177461027803 22 21.05215660580287 25.36227763286398 30.927173603985608 22.658392157347542 23 22.036196857499597 25.589867846855647 32.293580249966006 20.08035504567875 24 22.082555537698877 25.626089428984685 29.51737523333869 22.77397979997775 25 22.045468593539454 25.90263440926679 30.50067374615223 21.551223251041527 26 21.7140349359014 26.712984139150215 30.62961268867983 20.943368236268558 27 20.649268769084323 26.679853135701126 30.291750627387472 22.379127467827075 28 21.018283863470597 26.289698483143987 30.488929547168414 22.20308810621701 29 21.29062565674797 26.255578494517312 29.700337491191853 22.753458357542865 30 21.319924342633914 26.490462474193667 31.544053108504038 20.64556007466838 31 21.98847832268114 25.833405446835865 31.406955038261366 20.771161192221633 32 21.664091184433374 25.853926889270745 30.158732121002334 22.323249805293543 33 21.130039188537662 25.894104412110124 30.912833318910632 22.06302308044158 34 20.300033378249744 26.485764794600144 31.535275865052974 21.678925962097143 35 20.01087883695343 28.634829585491588 30.26714962109505 21.087141956459927 36 22.219406361647152 25.728078525423097 30.461485208490437 21.591029904439306 37 21.08837818793191 26.73647253711785 30.16182269968229 22.013326575267953 38 21.08763644904872 25.008715431877466 31.732949277422705 22.17069884165111 39 20.42007145417908 25.026022672485198 32.536994226799024 22.0169116465367 40 19.258879232547503 25.83315820054147 31.957819782176017 22.950142784735014 41 20.82926407140473 24.735384653422507 31.841984893251414 22.59336638192135 42 19.333671236602342 26.86701858055902 31.308427389944494 22.49088279289414 43 19.707754880023735 26.811511787467087 30.19717891978094 23.28355441272824 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 34.0 1 98.0 2 162.0 3 493.0 4 824.0 5 824.0 6 1315.5 7 1807.0 8 1982.5 9 2158.0 10 3209.0 11 4260.0 12 4260.0 13 7977.0 14 11694.0 15 17773.0 16 23852.0 17 21622.0 18 19392.0 19 19392.0 20 20673.5 21 21955.0 22 16753.0 23 11551.0 24 12762.0 25 13973.0 26 13973.0 27 14703.0 28 15433.0 29 16613.0 30 17793.0 31 19174.0 32 20555.0 33 20555.0 34 22645.0 35 24735.0 36 27444.0 37 30153.0 38 32474.0 39 34795.0 40 34795.0 41 36154.5 42 37514.0 43 41041.5 44 44569.0 45 49201.0 46 53833.0 47 53833.0 48 73094.0 49 92355.0 50 86388.0 51 80421.0 52 73721.5 53 67022.0 54 67022.0 55 58453.5 56 49885.0 57 42101.0 58 34317.0 59 30078.5 60 25840.0 61 25840.0 62 22641.0 63 19442.0 64 17163.0 65 14884.0 66 12855.5 67 10827.0 68 10827.0 69 9499.5 70 8172.0 71 6896.5 72 5621.0 73 4716.0 74 3811.0 75 3811.0 76 3078.0 77 2345.0 78 1814.0 79 1283.0 80 1038.0 81 793.0 82 793.0 83 588.5 84 384.0 85 301.0 86 218.0 87 164.5 88 111.0 89 111.0 90 95.5 91 80.0 92 61.0 93 42.0 94 27.0 95 12.0 96 12.0 97 6.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 808910.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.68927741463586 #Duplication Level Percentage of deduplicated Percentage of total 1 84.63154938699405 45.438067330687794 2 8.380213039786705 8.998551653737145 3 2.4577997793653856 3.95872482551937 4 1.1735530592627572 2.5202886303821104 5 0.701440462631268 1.8829915794030334 6 0.4684840843330927 1.5091543180860645 7 0.32293835820981887 1.2136828971227809 8 0.23576282220090758 1.0126348452161598 9 0.19531200433308862 0.943754434474298 >10 1.2429885330919614 12.690308571259354 >50 0.11471393235908185 4.267238453587939 >100 0.06485802152961148 6.212160105209281 >500 0.005770286612362662 1.9862059078451924 >1k 0.003923794896406611 3.7001573622628894 >5k 2.3081146449450648E-4 0.9856676934739618 >10k+ 4.6162292898901296E-4 2.6804113917326866 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11181 1.3822304088217476 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10449 1.2917382650727522 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7954 0.9832985128135392 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4217 0.5213188117343092 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2415 0.2985499004833665 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2377 0.2938522208898394 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2334 0.28853642556032194 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2299 0.28420961540838907 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2207 0.2728362858661656 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1927 0.2382218046507028 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1391 0.17195979775253117 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1293 0.1598447293271192 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1271 0.15712502008876142 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1256 0.1552706728807902 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1230 0.1520564710536401 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1192 0.147358791460113 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1133 0.1400650257754262 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1127 0.13932328689223772 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1110 0.13722169338987034 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1080 0.13351299897392788 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 929 0.1148459037470176 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 911 0.11262068709745213 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 871 0.10767576120952888 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 871 0.10767576120952888 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 810 0.10013474923044591 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.2362314719808137E-4 0.0 5 0.0 0.0 0.0 1.2362314719808137E-4 0.0 6 0.0 0.0 0.0 1.2362314719808137E-4 0.0 7 1.2362314719808137E-4 0.0 0.0 1.2362314719808137E-4 0.0 8 1.2362314719808137E-4 0.0 0.0 1.2362314719808137E-4 0.0 9 1.2362314719808137E-4 0.0 0.0 3.708694415942441E-4 0.0 10 1.2362314719808137E-4 0.0 0.0 7.417388831884882E-4 0.0 11 1.2362314719808137E-4 0.0 0.0 0.0011126083247827323 0.0 12 1.2362314719808137E-4 0.0 0.0 0.0024724629439616275 0.0 13 1.2362314719808137E-4 0.0 0.0 0.0025960860911597087 0.0 14 1.2362314719808137E-4 0.0 0.0 0.0034614481215462785 0.0 15 1.2362314719808137E-4 0.0 0.0 0.004697679593527092 0.0 16 2.4724629439616273E-4 0.0 0.0 0.007170142537488719 0.0 17 2.4724629439616273E-4 0.0 0.0 0.009148112892658022 0.0 18 2.4724629439616273E-4 0.0 0.0 0.010631590659034998 0.0 19 2.4724629439616273E-4 0.0 0.0 0.013474923044590869 0.0 20 2.4724629439616273E-4 0.0 0.0 0.02151042761246616 0.0 21 2.4724629439616273E-4 0.0 0.0 0.03362549603787813 0.0 22 2.4724629439616273E-4 0.0 0.0 0.05402331532556156 0.0 23 2.4724629439616273E-4 0.0 0.0 0.06984707816691597 0.0 24 2.4724629439616273E-4 0.0 0.0 0.09234649095696679 0.0 25 2.4724629439616273E-4 0.0 0.0 0.10742851491513271 0.0 26 4.944925887923255E-4 0.0 0.0 0.12560111755325068 0.0 27 4.944925887923255E-4 0.0 0.0 0.2037309465824381 0.0 28 4.944925887923255E-4 0.0 0.0 0.3784104535733271 0.0 29 4.944925887923255E-4 0.0 0.0 0.6079786379201642 0.0 30 4.944925887923255E-4 0.0 0.0 0.9269263576912141 0.0 31 4.944925887923255E-4 0.0 0.0 1.3639341830364318 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCGCTA 40 0.0019306955 23.125 10 ATACCGT 50 2.7011434E-4 22.2 6 GGTATCA 3850 0.0 21.71948 1 AGTCCGC 45 0.0038248429 20.555555 6 TCTATAG 45 0.0038248429 20.555555 3 CCCCTAT 55 5.141283E-4 20.181818 1 TGCACTG 160 0.0 19.65625 5 ATTGGAC 600 0.0 18.191668 3 GTATTGG 555 0.0 18.0 1 TAATACT 150 2.5102054E-10 17.266666 4 ATCTATA 65 0.0015793866 17.076923 2 TGTTAGG 130 1.3911631E-8 17.076923 19 CGATACC 65 0.0015793866 17.076923 4 TACCGTG 65 0.0015793866 17.076923 7 TTGGACC 695 0.0 17.03597 4 GTATTAG 175 7.2759576E-12 16.914286 1 TACTGGT 165 5.4569682E-11 16.818182 7 TGGACCC 720 0.0 16.444445 5 TAGTACT 125 1.6558079E-7 16.28 4 GGACCCT 750 0.0 16.279999 6 >>END_MODULE