##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088604_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1311400 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.807281531188043 31.0 31.0 34.0 30.0 34.0 2 31.996258197346346 31.0 31.0 34.0 30.0 34.0 3 32.07525773982004 33.0 31.0 34.0 30.0 34.0 4 35.749925270703066 37.0 35.0 37.0 35.0 37.0 5 35.6616676833918 37.0 35.0 37.0 33.0 37.0 6 35.68920847948757 37.0 35.0 37.0 33.0 37.0 7 35.57180646637182 37.0 35.0 37.0 33.0 37.0 8 35.5816875095318 37.0 35.0 37.0 33.0 37.0 9 37.216751563214885 39.0 37.0 39.0 33.0 39.0 10 37.077157236541105 39.0 37.0 39.0 33.0 39.0 11 37.125900564282446 39.0 37.0 39.0 33.0 39.0 12 37.02852142748208 39.0 37.0 39.0 33.0 39.0 13 37.06506252859539 39.0 37.0 39.0 33.0 39.0 14 38.14628488638097 40.0 37.0 41.0 33.0 41.0 15 38.10458517614763 40.0 37.0 41.0 33.0 41.0 16 38.0147033704438 40.0 37.0 41.0 33.0 41.0 17 38.022580448375784 40.0 37.0 41.0 33.0 41.0 18 37.99661583041025 40.0 37.0 41.0 33.0 41.0 19 38.011021808754 40.0 37.0 41.0 33.0 41.0 20 37.890915052615526 40.0 37.0 41.0 32.0 41.0 21 37.787067256367244 40.0 37.0 41.0 32.0 41.0 22 37.63678587768797 39.0 37.0 41.0 32.0 41.0 23 37.521380966905596 39.0 36.0 41.0 32.0 41.0 24 37.384886380966904 39.0 36.0 41.0 31.0 41.0 25 37.19963626658533 39.0 36.0 41.0 31.0 41.0 26 37.37654186365716 39.0 36.0 41.0 32.0 41.0 27 37.31329800213512 39.0 36.0 41.0 31.0 41.0 28 37.20568247674241 39.0 36.0 41.0 31.0 41.0 29 37.08539423516852 39.0 36.0 41.0 31.0 41.0 30 36.97904224492908 39.0 36.0 41.0 31.0 41.0 31 36.832086319963395 39.0 35.0 41.0 30.0 41.0 32 36.72268567942657 39.0 35.0 41.0 30.0 41.0 33 36.53333765441513 39.0 35.0 40.0 30.0 41.0 34 36.407063443648006 39.0 35.0 40.0 30.0 41.0 35 36.2575362208327 39.0 35.0 40.0 30.0 41.0 36 36.12444181790453 38.0 35.0 40.0 29.0 41.0 37 35.978501601342074 38.0 35.0 40.0 28.0 41.0 38 35.917098520664936 38.0 35.0 40.0 28.0 41.0 39 35.81319277108434 38.0 35.0 40.0 27.0 41.0 40 35.671041634894 38.0 35.0 40.0 27.0 41.0 41 35.561723349092574 38.0 35.0 40.0 26.0 41.0 42 35.372415738904984 38.0 34.0 40.0 25.0 41.0 43 35.03225179197804 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 2.0 14 3.0 15 6.0 16 15.0 17 30.0 18 64.0 19 173.0 20 381.0 21 737.0 22 1424.0 23 2418.0 24 3844.0 25 6097.0 26 8909.0 27 12870.0 28 17692.0 29 23490.0 30 30406.0 31 38165.0 32 48038.0 33 60253.0 34 75656.0 35 95679.0 36 125869.0 37 180890.0 38 259915.0 39 318371.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.861522037517155 20.98596919322861 13.486121701997863 23.666387067256366 2 18.862894616440446 22.667759646179654 35.43762391337502 23.03172182400488 3 19.582430989781912 24.69566875095318 32.07061156016471 23.6512886991002 4 13.790147933506178 16.291444258044837 36.8863809669056 33.03202684154339 5 13.23661735549794 37.810050327893855 35.17538508464237 13.777947231965836 6 32.19421991764527 37.403690712215955 14.320192161049262 16.081897209089526 7 26.42039042244929 32.397895378984295 22.032713131005032 19.149001067561386 8 26.359920695439985 34.93617508006711 19.506252859539426 19.197651364953487 9 24.89217630013726 14.46881195668751 21.49710233338417 39.14190940979106 10 16.515555894463933 26.90773219460119 33.79899344212292 22.777718468811955 11 33.499923745615376 22.680189110873876 23.14457831325301 20.67530883025774 12 20.76071374104011 26.70916577703218 31.19330486502974 21.336815616897972 13 30.765899039194757 21.11956687509532 26.091505261552538 22.02302882415739 14 20.723272838188194 22.729296934573735 27.271923135580295 29.275507091657772 15 23.5973005947842 29.173783742565195 24.820039652280006 22.408876010370594 16 22.46965075491841 28.202379136800364 26.063367393625132 23.264602714656093 17 21.85755680951655 26.864495958517615 26.96332164099436 24.31462559097148 18 22.776727161811806 25.74309897819125 28.884474607289917 22.59569925270703 19 23.14442580448376 25.30768644197041 29.475522342534692 22.072365411011134 20 23.989781912459968 24.940902851913986 29.243861522037516 21.82545371358853 21 23.071221595241724 25.5793045600122 29.350998932438614 21.998474912307458 22 22.0396522800061 25.939835290529206 29.440750343144728 22.579762086319963 23 22.57533933201159 26.054445630623764 29.983986579228304 21.38622845813634 24 22.75697727619338 26.181485435412537 28.27321946011896 22.788317828275126 25 22.776498398657925 26.162116821717245 28.912459966448072 22.148924813176755 26 22.47773371968888 26.611102638401707 28.88340704590514 22.02775659600427 27 21.928397132835137 26.70733567180113 28.69162726856794 22.67263992679579 28 22.026841543388745 26.370748818057038 28.82186975751106 22.78053988104316 29 22.23821869757511 26.547048955314928 28.587463779167305 22.627268567942657 30 22.18613695287479 26.541939911544915 29.600960805246302 21.670962330333996 31 22.470260789995425 26.306313863047126 29.52089370138783 21.70253164556962 32 22.14770474302272 26.029662955619948 28.92702455391185 22.895607747445478 33 21.860683239286256 26.09630928778405 29.493975903614455 22.549031569315236 34 21.481927710843372 26.233414671343603 29.950053378069242 22.334604239743786 35 21.414442580448377 27.623684611865183 29.03675461339027 21.92511819429617 36 22.70886075949367 26.16631081287174 28.951044685069395 22.1737837425652 37 21.978648772304407 26.434344974836055 28.946011895684006 22.640994357175536 38 21.742260179960347 25.53050175385085 30.101113314015553 22.626124752173247 39 21.2874027756596 25.313786792740583 30.67218240048803 22.72662803111179 40 20.779853591581514 25.74874180265365 30.508845508616744 22.962559097148088 41 21.598215647399726 24.83056275735855 30.523943876772915 23.047277718468813 42 20.44921457983834 26.175003812719233 30.34322098520665 23.032560622235778 43 20.692923593106606 25.95920390422449 29.815540643587006 23.532331859081896 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 43.0 1 132.0 2 221.0 3 588.0 4 955.0 5 955.0 6 1408.0 7 1861.0 8 2030.5 9 2200.0 10 3229.0 11 4258.0 12 4258.0 13 7691.0 14 11124.0 15 17197.5 16 23271.0 17 22050.0 18 20829.0 19 20829.0 20 23128.5 21 25428.0 22 21639.0 23 17850.0 24 20634.0 25 23418.0 26 23418.0 27 26094.0 28 28770.0 29 31988.0 30 35206.0 31 38764.0 32 42322.0 33 42322.0 34 46798.5 35 51275.0 36 56123.5 37 60972.0 38 64046.5 39 67121.0 40 67121.0 41 69335.5 42 71550.0 43 76280.5 44 81011.0 45 83862.5 46 86714.0 47 86714.0 48 103841.5 49 120969.0 50 116850.5 51 112732.0 52 106413.5 53 100095.0 54 100095.0 55 92086.0 56 84077.0 57 74541.0 58 65005.0 59 57798.5 60 50592.0 61 50592.0 62 44520.5 63 38449.0 64 33114.5 65 27780.0 66 23502.5 67 19225.0 68 19225.0 69 16433.0 70 13641.0 71 11301.5 72 8962.0 73 7409.5 74 5857.0 75 5857.0 76 4613.5 77 3370.0 78 2628.5 79 1887.0 80 1467.5 81 1048.0 82 1048.0 83 818.5 84 589.0 85 463.5 86 338.0 87 262.0 88 186.0 89 186.0 90 159.0 91 132.0 92 83.0 93 34.0 94 28.5 95 23.0 96 23.0 97 13.0 98 3.0 99 5.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1311400.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.51972747762233 #Duplication Level Percentage of deduplicated Percentage of total 1 83.9187191803003 49.94819295882593 2 9.686164925506752 11.530357933389318 3 2.604621443539638 4.6507907550555165 4 1.099870514161726 2.618559730543131 5 0.611213007435629 1.8189615816673297 6 0.37746698178313876 1.3480039132519832 7 0.2600569104992575 1.083496150911176 8 0.20191458427802073 0.961432082398816 9 0.14916120659600726 0.799023093014491 >10 0.9464727512387462 10.726320816665625 >50 0.09114532001598935 3.806256573246574 >100 0.04793796124153228 5.419573496054822 >500 0.0030762224799364534 1.1842491762803342 >1k 0.0017944631132962648 1.8259240987627081 >5k 1.281759366640189E-4 0.6341222156311369 >10k+ 2.563518733280378E-4 1.6447354243012124 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11061 0.8434497483605308 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10498 0.8005185298154643 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8312 0.6338264450205887 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3938 0.300289766661583 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2306 0.17584261095012962 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2211 0.1685984444105536 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2066 0.15754155863962177 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2026 0.15449138325453715 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1899 0.1448070764068934 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1681 0.1281836205581821 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.5250876925423213E-4 0.0 5 0.0 0.0 0.0 1.5250876925423213E-4 0.0 6 0.0 0.0 0.0 1.5250876925423213E-4 0.0 7 0.0 0.0 0.0 1.5250876925423213E-4 0.0 8 0.0 0.0 0.0 1.5250876925423213E-4 0.0 9 0.0 0.0 0.0 3.812719231355803E-4 0.0 10 7.625438462711606E-5 0.0 0.0 3.812719231355803E-4 0.0 11 7.625438462711606E-5 0.0 0.0 6.100350770169285E-4 0.0 12 7.625438462711606E-5 7.625438462711606E-5 0.0 9.150526155253927E-4 0.0 13 7.625438462711606E-5 7.625438462711606E-5 0.0 9.150526155253927E-4 0.0 14 7.625438462711606E-5 1.5250876925423213E-4 0.0 0.001067561384779625 0.0 15 7.625438462711606E-5 1.5250876925423213E-4 0.0 0.0014488333079152051 0.0 16 7.625438462711606E-5 1.5250876925423213E-4 0.0 0.00213512276955925 0.0 17 7.625438462711606E-5 1.5250876925423213E-4 0.0 0.00251639469269483 0.0 18 7.625438462711606E-5 1.5250876925423213E-4 0.0 0.0032026841543388745 0.0 19 7.625438462711606E-5 1.5250876925423213E-4 0.0 0.0041939911544913834 0.0 20 7.625438462711606E-5 1.5250876925423213E-4 0.0 0.006786640231813329 0.0 21 7.625438462711606E-5 1.5250876925423213E-4 0.0 0.012276955924965685 0.0 22 7.625438462711606E-5 1.5250876925423213E-4 0.0 0.020817447003202684 0.0 23 7.625438462711606E-5 2.2876315388134817E-4 0.0 0.025697727619338112 0.0 24 7.625438462711606E-5 2.2876315388134817E-4 0.0 0.036525850236388595 0.0 25 7.625438462711606E-5 3.0501753850846426E-4 0.0 0.04232118346804941 0.0 26 7.625438462711606E-5 3.0501753850846426E-4 0.0 0.05185298154643892 0.0 27 7.625438462711606E-5 3.0501753850846426E-4 0.0 0.10980631386304712 0.0 28 7.625438462711606E-5 3.0501753850846426E-4 0.0 0.23227085557419552 0.0 29 7.625438462711606E-5 3.0501753850846426E-4 0.0 0.3834070459051395 0.0 30 7.625438462711606E-5 3.0501753850846426E-4 0.0 0.5791520512429464 0.0 31 7.625438462711606E-5 3.812719231355803E-4 0.0 0.8721213969803263 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3355 0.0 23.821165 1 ATCCGAC 50 0.0070353993 18.499998 17 CCGTTTA 290 0.0 17.862068 27 TAGACAG 135 1.1532393E-9 17.814816 5 TCTAACC 95 3.6071724E-6 17.526316 3 ACCGTTA 305 0.0 16.983606 8 AAGACCG 125 1.658118E-7 16.28 5 CGTTTAC 320 0.0 16.1875 28 TACCCTC 195 1.8189894E-12 16.128206 5 TAATCGC 105 9.345029E-6 15.857142 23 GGACCGT 340 0.0 15.779412 6 GTATCAA 5130 0.0 15.578948 2 GACCGTT 350 0.0 15.328571 7 TACCGAA 85 5.3648674E-4 15.235294 7 CGTTATA 110 1.4521E-5 15.136364 10 TAGTACT 185 3.0559022E-10 15.0 4 TAGCGAA 260 0.0 14.942307 10 GTTCTAT 100 1.0935507E-4 14.799999 1 GTTATCG 100 1.0935507E-4 14.799999 11 GTATTGG 615 0.0 14.739838 1 >>END_MODULE