##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088603_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1389401 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.8110703821287 31.0 31.0 34.0 30.0 34.0 2 31.99120196401183 31.0 31.0 34.0 30.0 34.0 3 32.079781143096916 33.0 31.0 34.0 30.0 34.0 4 35.74099198143661 37.0 35.0 37.0 35.0 37.0 5 35.65833333933112 37.0 35.0 37.0 33.0 37.0 6 35.69794969198957 37.0 35.0 37.0 33.0 37.0 7 35.57437557623753 37.0 35.0 37.0 33.0 37.0 8 35.59570851035806 37.0 35.0 37.0 33.0 37.0 9 37.228360278997926 39.0 37.0 39.0 34.0 39.0 10 37.10146458797712 39.0 37.0 39.0 33.0 39.0 11 37.14099457248123 39.0 37.0 39.0 33.0 39.0 12 37.051854720127594 39.0 37.0 39.0 33.0 39.0 13 37.096935298016916 39.0 37.0 39.0 33.0 39.0 14 38.16923408001002 40.0 37.0 41.0 33.0 41.0 15 38.130868626120176 40.0 37.0 41.0 33.0 41.0 16 38.02954798506695 40.0 37.0 41.0 33.0 41.0 17 38.04656323120539 40.0 37.0 41.0 33.0 41.0 18 38.02239526241884 40.0 37.0 41.0 33.0 41.0 19 38.04231823641987 40.0 37.0 41.0 33.0 41.0 20 37.92455021984294 40.0 37.0 41.0 33.0 41.0 21 37.83394066939638 40.0 37.0 41.0 32.0 41.0 22 37.68155917550081 40.0 37.0 41.0 32.0 41.0 23 37.56057178597108 39.0 36.0 41.0 32.0 41.0 24 37.433967587471145 39.0 36.0 41.0 32.0 41.0 25 37.24629102757231 39.0 36.0 41.0 31.0 41.0 26 37.41904389013683 39.0 36.0 41.0 32.0 41.0 27 37.357226603406794 39.0 36.0 41.0 32.0 41.0 28 37.2439259796128 39.0 36.0 41.0 31.0 41.0 29 37.12478758832044 39.0 36.0 41.0 31.0 41.0 30 36.99463293894275 39.0 36.0 41.0 31.0 41.0 31 36.83759908046705 39.0 35.0 41.0 30.0 41.0 32 36.71796119334879 39.0 35.0 41.0 30.0 41.0 33 36.52880269986851 39.0 35.0 40.0 30.0 41.0 34 36.39086627978532 39.0 35.0 40.0 30.0 41.0 35 36.20058500029869 38.0 35.0 40.0 30.0 41.0 36 36.06066283240044 38.0 35.0 40.0 29.0 41.0 37 35.90383769696437 38.0 35.0 40.0 28.0 41.0 38 35.81814177476481 38.0 35.0 40.0 27.0 41.0 39 35.700747300455376 38.0 35.0 40.0 27.0 41.0 40 35.53250573448558 38.0 35.0 40.0 26.0 41.0 41 35.40538188759041 38.0 35.0 40.0 25.0 41.0 42 35.19132273548097 38.0 34.0 40.0 24.0 41.0 43 34.84365204861663 38.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 1.0 14 2.0 15 8.0 16 18.0 17 26.0 18 97.0 19 188.0 20 380.0 21 797.0 22 1416.0 23 2493.0 24 4169.0 25 6449.0 26 9786.0 27 13776.0 28 18901.0 29 25522.0 30 32236.0 31 40522.0 32 50739.0 33 63231.0 34 80244.0 35 101403.0 36 134211.0 37 193125.0 38 272864.0 39 336795.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.13578369383641 20.898790198078167 13.462420136447289 23.50300597163814 2 18.76722414911174 22.692800710522015 35.59368389687354 22.946291243492702 3 19.766575668219613 24.65832398278107 32.23533018905269 23.339770159946625 4 13.749738196532174 15.849204081471079 36.63679528084405 33.764262441152695 5 13.161715012440615 37.86315109892681 35.10232107217427 13.872812816458316 6 32.589151727974865 36.91972295975028 13.828765057747908 16.662360254526952 7 26.351211781192042 32.45110662796414 21.80594371243435 19.391737878409472 8 26.734110598740035 34.604048795128264 19.228861934027684 19.432978672104024 9 24.44211570309795 14.411390232193586 21.94895498131929 39.197539083389174 10 16.598375846857746 26.82263795693252 33.804999420613626 22.773986775596104 11 33.174511893974454 22.12809692810067 23.648536311691153 21.04885486623372 12 20.865034644425904 26.728856536018043 30.995155466276476 21.41095335327958 13 31.275348153628794 20.681790210313654 26.2951444543368 21.747717181720756 14 20.65501608247007 22.608303866198458 27.484361966055875 29.252318085275597 15 23.202084927245625 28.969246459445475 25.294065572142237 22.534603041166662 16 22.22187834901515 28.06317254701846 26.366254234738566 23.348694869227817 17 21.904547355299155 26.39583532759801 27.14140841988742 24.55820889721542 18 23.173079622081747 25.37913820416136 29.29111178126401 22.15667039249288 19 22.923691576441936 24.880937900577297 29.999906434499472 22.195464088481295 20 23.968962164270792 24.47529546905465 29.750446415397715 21.805295951276847 21 22.87093502883617 25.348117642063016 30.140398632216332 21.640548696884483 22 21.754770580991377 25.662785617687046 29.77750843708908 22.804935364232502 23 22.442189116029137 25.822134862433522 30.766279857291018 20.96939616424632 24 22.678693911980773 25.998325897275155 28.369491601056858 22.95348858968721 25 22.57526804716565 25.906559733295136 29.1779694990863 22.340202720452915 26 22.26693373619279 26.73886084722841 29.442759865582364 21.551445550996437 27 21.49940873801012 26.73526217413115 29.01933998895927 22.745989098899454 28 21.70611652071648 26.45305422984437 29.298812941692137 22.542016307747005 29 22.220079012466524 26.19618094416227 28.821053101300485 22.76268694207072 30 21.90224420451691 26.43628441321116 30.31810110975881 21.34337027251312 31 22.5399290773506 25.985082780277256 30.145940588786104 21.32904755358604 32 22.09232611751395 25.860064876878596 29.166309798251188 22.881299207356264 33 21.779241558052714 25.987889745293113 29.814502796528863 22.418365900125306 34 21.27197259826357 26.52020546983916 30.124780390974237 22.08304154092303 35 20.968460509241034 28.21928298597741 29.14579736159683 21.666459143184724 36 22.81731479968706 26.11175607330065 29.172427542516523 21.898501584495765 37 21.79745084392483 26.436644280520888 29.207694538869628 22.55821033668466 38 21.69352116487609 25.19661350466856 30.577997280842606 22.531868049612747 39 21.053245247412374 25.211583984753144 31.094838711070455 22.640332056764027 40 20.24059288859012 25.914116946799375 30.85315182585877 22.992138338751737 41 21.526614706625374 24.66732066552421 30.804569739045817 23.0014948888046 42 20.089952432739 26.676028014950326 30.335878554859253 22.898140997451417 43 20.48069635763901 26.39489967259272 29.706110762839526 23.41829320692874 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 69.0 1 138.5 2 208.0 3 683.5 4 1159.0 5 1159.0 6 1751.0 7 2343.0 8 2532.0 9 2721.0 10 4003.0 11 5285.0 12 5285.0 13 9505.5 14 13726.0 15 21534.0 16 29342.0 17 27337.0 18 25332.0 19 25332.0 20 27608.0 21 29884.0 22 24398.5 23 18913.0 24 21681.0 25 24449.0 26 24449.0 27 26372.5 28 28296.0 29 30939.0 30 33582.0 31 37234.0 32 40886.0 33 40886.0 34 45352.5 35 49819.0 36 54753.5 37 59688.0 38 63179.0 39 66670.0 40 66670.0 41 69625.5 42 72581.0 43 77968.0 44 83355.0 45 88128.0 46 92901.0 47 92901.0 48 117868.5 49 142836.0 50 135817.5 51 128799.0 52 119945.0 53 111091.0 54 111091.0 55 99959.5 56 88828.0 57 75658.0 58 62488.0 59 55527.5 60 48567.0 61 48567.0 62 42575.5 63 36584.0 64 32060.0 65 27536.0 66 23732.5 67 19929.0 68 19929.0 69 17351.5 70 14774.0 71 12541.0 72 10308.0 73 8652.5 74 6997.0 75 6997.0 76 5566.5 77 4136.0 78 3258.5 79 2381.0 80 1898.0 81 1415.0 82 1415.0 83 1083.0 84 751.0 85 565.0 86 379.0 87 296.0 88 213.0 89 213.0 90 163.5 91 114.0 92 76.0 93 38.0 94 29.5 95 21.0 96 21.0 97 13.5 98 6.0 99 3.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1389401.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.82614389394117 #Duplication Level Percentage of deduplicated Percentage of total 1 82.83224483013957 43.75708084455117 2 9.883112221428043 10.44173416658253 3 2.805429386108185 4.446000493045261 4 1.208272810254762 2.5531357335061897 5 0.667606916446015 1.7633549516383775 6 0.45906427210327244 1.4550357176816902 7 0.32358192769469635 1.1965509831715229 8 0.23936874266614902 1.011594211503501 9 0.18021351646328207 0.8567986637090228 >10 1.1876288166994793 12.002376497027457 >50 0.12253780843514595 4.526740010299212 >100 0.08177651967625203 8.000980571593578 >500 0.005606738914882248 1.9501082435942494 >1k 0.0030084940518880355 2.973526783583126 >5k 1.3674972963127435E-4 0.3750680496662842 >10k+ 4.10249188893823E-4 2.689914078847026 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14231 1.0242543369408832 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12872 0.9264424021574765 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10133 0.7293070898898159 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5192 0.3736862144190194 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3562 0.2563694714484875 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3560 0.2562255245245973 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3392 0.24413398291781857 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2926 0.21059434965139653 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2763 0.19886267535434338 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2451 0.17640695522746852 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1959 0.14099601195047362 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1768 0.1272490807189573 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1643 0.11825239797581837 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1593 0.11465372487856278 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1558 0.11213465371048388 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1547 0.11134294562908764 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1533 0.11033531716185607 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 1524 0.10968755600435007 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1418 0.10205836903816824 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 7.19734619451116E-5 0.0 9 0.0 0.0 0.0 2.159203858353348E-4 0.0 10 0.0 0.0 0.0 3.59867309725558E-4 0.0 11 1.439469238902232E-4 0.0 0.0 5.038142336157812E-4 0.0 12 1.439469238902232E-4 0.0 0.0 6.477611575060044E-4 0.0 13 1.439469238902232E-4 0.0 0.0 7.19734619451116E-4 0.0 14 1.439469238902232E-4 0.0 0.0 7.917080813962276E-4 0.0 15 1.439469238902232E-4 0.0 0.0 0.0010796019291766739 0.0 16 1.439469238902232E-4 0.0 0.0 0.0016553896247375667 0.0 17 1.439469238902232E-4 0.0 0.0 0.002519071168078906 0.0 18 1.439469238902232E-4 0.0 0.0 0.003022885401694687 0.0 19 1.439469238902232E-4 0.0 0.0 0.004102487330871361 0.0 20 1.439469238902232E-4 0.0 0.0 0.0076291869661818295 0.0 21 1.439469238902232E-4 0.0 0.0 0.015258373932363659 0.0 22 1.439469238902232E-4 0.0 0.0 0.025766499376349953 0.0 23 1.439469238902232E-4 0.0 0.0 0.03469120865754379 0.0 24 1.439469238902232E-4 0.0 0.0 0.04728656449793832 0.0 25 1.439469238902232E-4 0.0 0.0 0.05592337993135171 0.0 26 1.439469238902232E-4 0.0 0.0 0.0701021519345387 0.0 27 1.439469238902232E-4 0.0 0.0 0.1278248684145182 0.0 28 1.439469238902232E-4 0.0 0.0 0.2601120914696333 0.0 29 1.439469238902232E-4 0.0 0.0 0.42478737240004866 0.0 30 1.439469238902232E-4 0.0 0.0 0.6495604940546322 0.0 31 1.439469238902232E-4 0.0 0.0 0.9685468773953668 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATATCG 50 2.7024967E-4 22.199999 5 GGTATCA 5115 0.0 21.990225 1 TACACTG 160 6.2937033E-10 16.1875 5 AGTTCCG 140 3.4744517E-8 15.857142 32 ACCGTTA 200 3.6379788E-12 15.724999 8 GACCGTT 250 0.0 15.540001 7 GTGTTAG 120 1.9361105E-6 15.416666 1 GTATCAA 7370 0.0 15.211669 2 TAGACTG 135 3.9735824E-7 15.074075 5 GACGTAT 175 2.239176E-9 14.799999 28 CGGGTAA 165 1.6454578E-8 14.575757 26 TAATGGT 115 2.2103904E-5 14.478261 4 TCTATAC 115 2.2103904E-5 14.478261 3 GTATTGG 845 0.0 14.449703 1 TAGACTT 90 8.2755473E-4 14.388888 5 GTACTAT 195 6.730261E-10 14.23077 1 ACGTTCG 130 4.445281E-6 14.230769 22 CTAGCCT 170 2.4372639E-8 14.147059 4 CGGTTGG 145 8.913048E-7 14.034483 33 CCGTTAT 225 2.7284841E-11 13.9777775 9 >>END_MODULE