##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088602_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 564175 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.79094784419728 31.0 31.0 34.0 30.0 34.0 2 31.971322727876988 31.0 31.0 34.0 30.0 34.0 3 32.04922586077015 33.0 31.0 34.0 30.0 34.0 4 35.72117871227899 37.0 35.0 37.0 35.0 37.0 5 35.63827713032304 37.0 35.0 37.0 33.0 37.0 6 35.67144768910356 37.0 35.0 37.0 33.0 37.0 7 35.55359950370009 37.0 35.0 37.0 33.0 37.0 8 35.575059157176405 37.0 35.0 37.0 33.0 37.0 9 37.19541099836044 39.0 37.0 39.0 33.0 39.0 10 37.07340452873665 39.0 37.0 39.0 33.0 39.0 11 37.11049408428236 39.0 37.0 39.0 33.0 39.0 12 37.02700580493641 39.0 37.0 39.0 33.0 39.0 13 37.05962511632029 39.0 37.0 39.0 33.0 39.0 14 38.12166969468693 40.0 37.0 41.0 33.0 41.0 15 38.08182744715735 40.0 37.0 41.0 33.0 41.0 16 37.98345194310276 40.0 37.0 41.0 33.0 41.0 17 38.006400496299904 40.0 37.0 41.0 33.0 41.0 18 37.98687286746134 40.0 37.0 41.0 33.0 41.0 19 38.01248548765897 40.0 37.0 41.0 33.0 41.0 20 37.89810962910445 40.0 37.0 41.0 32.0 41.0 21 37.80085611733948 40.0 37.0 41.0 32.0 41.0 22 37.65326538751274 39.0 37.0 41.0 32.0 41.0 23 37.51966322506315 39.0 36.0 41.0 32.0 41.0 24 37.3786821464971 39.0 36.0 41.0 31.0 41.0 25 37.18935259449639 39.0 36.0 41.0 31.0 41.0 26 37.35255195639651 39.0 36.0 41.0 32.0 41.0 27 37.28059555988833 39.0 36.0 41.0 31.0 41.0 28 37.16464217662959 39.0 36.0 41.0 31.0 41.0 29 37.03928568263393 39.0 36.0 41.0 31.0 41.0 30 36.897163114281916 39.0 35.0 41.0 31.0 41.0 31 36.722288297070946 39.0 35.0 40.0 30.0 41.0 32 36.602181947090884 39.0 35.0 40.0 30.0 41.0 33 36.39821686533434 39.0 35.0 40.0 30.0 41.0 34 36.24978242566579 38.0 35.0 40.0 30.0 41.0 35 36.05213985022378 38.0 35.0 40.0 29.0 41.0 36 35.91990428501795 38.0 35.0 40.0 29.0 41.0 37 35.74860637213631 38.0 35.0 40.0 27.0 41.0 38 35.66004874374086 38.0 35.0 40.0 27.0 41.0 39 35.53036912305579 38.0 35.0 40.0 26.0 41.0 40 35.36017370496743 38.0 35.0 40.0 25.0 41.0 41 35.21762219169584 38.0 34.0 40.0 24.0 41.0 42 34.993829928656886 38.0 34.0 40.0 24.0 41.0 43 34.631057739176676 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 2.0 15 2.0 16 12.0 17 15.0 18 30.0 19 67.0 20 175.0 21 306.0 22 590.0 23 1068.0 24 1754.0 25 2804.0 26 4137.0 27 5894.0 28 8144.0 29 10659.0 30 13613.0 31 17026.0 32 20983.0 33 26380.0 34 33224.0 35 41320.0 36 55160.0 37 79997.0 38 110261.0 39 130551.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.175034342181064 20.966721318739754 13.640271192449152 23.217973146630037 2 18.90087295608632 22.897505206717774 35.437408605485885 22.76421323171002 3 19.971285505383968 24.776532104400232 32.1258474764036 23.126334913812205 4 13.845172154030221 16.036690743120484 36.25382195240838 33.86431515044091 5 13.107280542384897 38.02295387069615 34.98949793946914 13.880267647449815 6 32.66415562547082 36.65369787743165 13.963043381929365 16.719103115168167 7 26.325342313998316 32.50055390614614 21.78437541542961 19.38972836442593 8 26.715292240882704 34.534142774848235 19.29933088137546 19.451234102893604 9 24.373642929941948 14.680905747330172 22.06584836265343 38.87960296007444 10 16.730092613107637 26.99304293880445 33.72109717729428 22.555767270793638 11 32.85594008951123 22.419816546284395 23.640182567465768 21.0840607967386 12 20.90911507954092 26.920547702397307 31.223290645633007 20.947046572428768 13 31.29419063233926 20.81056409801923 26.435414543359776 21.45983072628174 14 20.48956440820667 22.910444454291664 27.779323791376786 28.82066734612487 15 23.12934816324722 29.159746532547526 25.543492710595118 22.167412593610138 16 22.047946116010102 28.0402357424558 26.6647760003545 23.247042141179598 17 21.598794700225994 26.662294500819783 27.2862143838348 24.45269641511942 18 22.746488235033453 25.544378960428944 29.56671245624141 22.142420348296184 19 22.88172995967563 24.906101830105907 30.342535560774582 21.86963264944388 20 23.632560818894845 24.453405414986484 30.428856294589444 21.485177471529223 21 22.679487747596045 25.24057251739265 30.72681348872247 21.353126246288827 22 21.40009748748172 25.86626490007533 30.30814906722205 22.425488545220897 23 22.175211592147825 25.98076837860593 31.10541941773386 20.738600611512386 24 22.4022687995746 26.03677936810387 28.84619134133912 22.714760490982407 25 22.306731067487924 26.059644613816634 29.77710816679222 21.85651615190322 26 22.025612620197634 26.774316479815656 29.86307440067355 21.33699649931316 27 21.338591749014046 26.706075242610893 29.630699694243805 22.324633314131255 28 21.52594496388532 26.351929809013157 29.826206407586298 22.29591881951522 29 21.936633136881287 26.356715558115834 29.211326272876327 22.495325032126555 30 21.59117295165507 26.493729782425667 30.79381397615988 21.121283289759383 31 22.301768068418486 26.12558160145345 30.53875127398414 21.033899056143927 32 21.79252891390083 26.04564186644215 29.578056454114414 22.583772765542605 33 21.473478973722692 26.078787610227323 30.214561084769798 22.233172331280187 34 21.043647804316038 26.41219479771347 30.68409624673195 21.860061151238533 35 20.772632605131385 28.23769220543271 29.528426463420036 21.461248726015864 36 22.44126379226304 26.1284176009217 29.702131430850358 21.728187175964905 37 21.62236894580582 26.640847254841137 29.47507422342358 22.261709575929455 38 21.456817476846723 25.388753489608725 30.791509726591926 22.36291930695263 39 20.965303319005628 25.251739265298887 31.38724686489121 22.39571055080427 40 20.00407674923561 26.035893118270042 31.069969424380734 22.890060708113616 41 21.27921301014756 24.896530331900564 31.03310143129348 22.791155226658393 42 19.94522976026942 26.797713475428726 30.54424602295387 22.712810741347987 43 20.244959454070102 26.416803296849384 29.933974387379802 23.404262861700715 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 34.0 1 67.0 2 100.0 3 292.0 4 484.0 5 484.0 6 773.0 7 1062.0 8 1171.0 9 1280.0 10 1828.0 11 2376.0 12 2376.0 13 4324.0 14 6272.0 15 9662.0 16 13052.0 17 12037.0 18 11022.0 19 11022.0 20 11852.5 21 12683.0 22 10216.0 23 7749.0 24 8689.0 25 9629.0 26 9629.0 27 10656.0 28 11683.0 29 12821.5 30 13960.0 31 15217.5 32 16475.0 33 16475.0 34 18421.5 35 20368.0 36 22336.5 37 24305.0 38 25962.0 39 27619.0 40 27619.0 41 28388.0 42 29157.0 43 31480.0 44 33803.0 45 35836.0 46 37869.0 47 37869.0 48 47498.5 49 57128.0 50 54405.5 51 51683.0 52 48341.0 53 44999.0 54 44999.0 55 40496.5 56 35994.0 57 30727.0 58 25460.0 59 22679.0 60 19898.0 61 19898.0 62 17536.5 63 15175.0 64 13232.5 65 11290.0 66 9480.5 67 7671.0 68 7671.0 69 6526.0 70 5381.0 71 4474.0 72 3567.0 73 2862.5 74 2158.0 75 2158.0 76 1708.0 77 1258.0 78 987.5 79 717.0 80 539.5 81 362.0 82 362.0 83 284.0 84 206.0 85 161.5 86 117.0 87 86.5 88 56.0 89 56.0 90 51.5 91 47.0 92 31.0 93 15.0 94 12.0 95 9.0 96 9.0 97 5.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 564175.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.37811804724609 #Duplication Level Percentage of deduplicated Percentage of total 1 87.55601243264341 54.61579279269577 2 7.208951593225928 8.993616669582593 3 1.890588492227677 3.5379405644082906 4 0.8564101259989357 2.1368500774567405 5 0.5141191806679326 1.6034893471028866 6 0.34014763062304765 1.2730661433897315 7 0.22339904050071294 0.9754648203996489 8 0.20276878831056874 1.0118668330826968 9 0.14270785650415105 0.8011662767356851 >10 0.9363950515852019 11.016395462238373 >50 0.07761161328931869 3.216338685263086 >100 0.044918071055116894 4.9732035755039155 >500 0.003411499067477124 1.3977603259920528 >1k 0.001990041122694989 2.32948231949145 >5k 5.685831779128539E-4 2.1175661066570797 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6254 1.1085212921522578 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5687 1.0080205609961448 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4449 0.7885851021402934 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2370 0.42008242123454603 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1355 0.2401737049674303 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1317 0.23343820623033634 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1314 0.23290645633003942 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1176 0.20844596091638234 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1155 0.20472371161430408 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 960 0.17015996809500597 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 733 0.1299242256392077 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 667 0.11822572783267603 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 663 0.11751672796561351 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 655 0.11609872823148847 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 644 0.11414897859706652 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 643 0.11397172863030088 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 631 0.1118447290291133 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 595 0.10546373022555057 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 586 0.1038684805246599 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.7724996676563124E-4 0.0 0.0 0.0 0.0 7 1.7724996676563124E-4 0.0 0.0 0.0 0.0 8 1.7724996676563124E-4 0.0 0.0 0.0 0.0 9 1.7724996676563124E-4 0.0 0.0 5.317499002968937E-4 0.0 10 1.7724996676563124E-4 0.0 0.0 5.317499002968937E-4 0.0 11 3.544999335312625E-4 0.0 0.0 8.862498338281561E-4 0.0 12 3.544999335312625E-4 0.0 0.0 0.0010634998005937873 0.0 13 3.544999335312625E-4 0.0 0.0 0.0010634998005937873 1.7724996676563124E-4 14 5.317499002968937E-4 0.0 0.0 0.0012407497673594186 1.7724996676563124E-4 15 5.317499002968937E-4 0.0 0.0 0.002481499534718837 1.7724996676563124E-4 16 5.317499002968937E-4 0.0 0.0 0.003722249302078256 1.7724996676563124E-4 17 5.317499002968937E-4 0.0 0.0 0.004253999202375149 3.544999335312625E-4 18 5.317499002968937E-4 0.0 0.0 0.004962999069437674 3.544999335312625E-4 19 5.317499002968937E-4 0.0 0.0 0.006203748836797093 3.544999335312625E-4 20 5.317499002968937E-4 0.0 0.0 0.010989497939469137 5.317499002968937E-4 21 5.317499002968937E-4 0.0 0.0 0.019320246377453804 7.08999867062525E-4 22 5.317499002968937E-4 0.0 0.0 0.032259493951344885 8.862498338281561E-4 23 5.317499002968937E-4 0.0 0.0 0.041121992289626444 8.862498338281561E-4 24 5.317499002968937E-4 0.0 0.0 0.05583373953117384 8.862498338281561E-4 25 5.317499002968937E-4 0.0 0.0 0.06664598750387735 8.862498338281561E-4 26 5.317499002968937E-4 0.0 0.0 0.07940798511100279 8.862498338281561E-4 27 5.317499002968937E-4 0.0 0.0 0.13860947401072363 8.862498338281561E-4 28 7.08999867062525E-4 0.0 0.0 0.27881419772233795 8.862498338281561E-4 29 7.08999867062525E-4 0.0 0.0 0.4573049142553286 0.0012407497673594186 30 8.862498338281561E-4 0.0 0.0 0.6948198697212744 0.0012407497673594186 31 0.0010634998005937873 0.0 0.0 1.023264058137989 0.00141799973412505 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGATC 20 0.0018411418 37.0 8 GGGCGTC 65 2.6788257E-6 22.76923 7 GGTATCA 1980 0.0 20.742424 1 TGGAGCG 45 0.00382343 20.555555 5 TAACACT 55 5.1386346E-4 20.181818 4 GTACTGG 65 6.89417E-5 19.923077 1 ATTGGAC 315 0.0 18.79365 3 ATTAGAC 70 1.2178013E-4 18.5 3 TTAGACT 60 9.228869E-4 18.5 4 GTACTAG 90 2.1482665E-6 18.5 1 TGATCGT 50 0.0070305523 18.499998 32 GTAATAC 50 0.0070305523 18.499998 3 CGGACTG 50 0.0070305523 18.499998 5 GTATTGG 315 0.0 18.206348 1 TAGGGGT 85 2.7191381E-5 17.411764 4 AACTGCA 65 0.0015785861 17.076923 7 GACTGCT 65 0.0015785861 17.076923 7 TAAGTCC 120 1.0384065E-7 16.958334 34 TGGACCC 400 0.0 16.65 5 TTGGACC 425 0.0 16.541176 4 >>END_MODULE