##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088601_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1426434 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.8008803772204 31.0 31.0 34.0 30.0 34.0 2 31.980672081568443 31.0 31.0 34.0 30.0 34.0 3 32.06942767769136 33.0 31.0 34.0 30.0 34.0 4 35.73864476029035 37.0 35.0 37.0 35.0 37.0 5 35.64651361366877 37.0 35.0 37.0 33.0 37.0 6 35.680330810959354 37.0 35.0 37.0 33.0 37.0 7 35.56011915027264 37.0 35.0 37.0 33.0 37.0 8 35.57525689937284 37.0 35.0 37.0 33.0 37.0 9 37.21204135627726 39.0 37.0 39.0 33.0 39.0 10 37.07334443794806 39.0 37.0 39.0 33.0 39.0 11 37.119935447416424 39.0 37.0 39.0 33.0 39.0 12 37.02527491632981 39.0 37.0 39.0 33.0 39.0 13 37.062995553947815 39.0 37.0 39.0 33.0 39.0 14 38.15123027073107 40.0 37.0 41.0 33.0 41.0 15 38.10760610024719 40.0 37.0 41.0 33.0 41.0 16 38.01653634167441 40.0 37.0 41.0 33.0 41.0 17 38.018361873034436 40.0 37.0 41.0 33.0 41.0 18 37.99357488674555 40.0 37.0 41.0 33.0 41.0 19 38.008831814160345 40.0 37.0 41.0 33.0 41.0 20 37.885016762079424 40.0 37.0 41.0 32.0 41.0 21 37.78929624504183 40.0 37.0 41.0 32.0 41.0 22 37.638517449808404 39.0 37.0 41.0 32.0 41.0 23 37.50801649427874 39.0 36.0 41.0 32.0 41.0 24 37.385374297023205 39.0 36.0 41.0 31.0 41.0 25 37.20109237441059 39.0 36.0 41.0 31.0 41.0 26 37.36555073701272 39.0 36.0 41.0 32.0 41.0 27 37.304088377029714 39.0 36.0 41.0 31.0 41.0 28 37.19705853898603 39.0 36.0 41.0 31.0 41.0 29 37.06783138932471 39.0 36.0 41.0 31.0 41.0 30 36.95367819331283 39.0 36.0 41.0 31.0 41.0 31 36.797006380947174 39.0 35.0 41.0 30.0 41.0 32 36.68065189135985 39.0 35.0 41.0 30.0 41.0 33 36.493728416456705 39.0 35.0 40.0 30.0 41.0 34 36.35800254340544 39.0 35.0 40.0 30.0 41.0 35 36.18040582319266 38.0 35.0 40.0 30.0 41.0 36 36.05181242174542 38.0 35.0 40.0 29.0 41.0 37 35.89194172320626 38.0 35.0 40.0 28.0 41.0 38 35.82331534441832 38.0 35.0 40.0 27.0 41.0 39 35.718035324452444 38.0 35.0 40.0 27.0 41.0 40 35.567159784469524 38.0 35.0 40.0 26.0 41.0 41 35.447215223417274 38.0 35.0 40.0 26.0 41.0 42 35.253499285631165 38.0 34.0 40.0 25.0 41.0 43 34.917533513643114 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 3.0 14 3.0 15 5.0 16 11.0 17 36.0 18 99.0 19 163.0 20 382.0 21 751.0 22 1520.0 23 2614.0 24 4473.0 25 6680.0 26 10165.0 27 14207.0 28 19853.0 29 26170.0 30 33638.0 31 41801.0 32 52083.0 33 65475.0 34 83014.0 35 104553.0 36 137771.0 37 198359.0 38 281924.0 39 340680.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.1722981925557 20.580202098379598 13.24533767422818 24.002162034836523 2 18.80072965170488 22.350210384777704 35.400796671980615 23.448263291536797 3 19.746935364692654 24.593847314351734 31.735993393315077 23.923223927640535 4 13.885465433381425 15.717166023804815 36.33529486818177 34.06207367463198 5 13.369002701842497 37.55785406124644 35.053637252056525 14.019505984854538 6 33.06595327929649 36.60428733471019 14.03906524942619 16.290694136567133 7 26.99171500398897 31.808481850544783 21.92362212342106 19.276181022045183 8 26.766608199187626 34.504715956013385 19.248139065670056 19.480536779128933 9 24.79574940025266 14.314927995266519 21.505236134304145 39.384086470176676 10 16.58190985352284 26.60312359352063 33.85365183387384 22.961314719082694 11 33.698089080882816 21.98194939268133 23.45485315128495 20.8651083751509 12 21.083064481076587 26.17954984247431 31.044058119758784 21.69332755669032 13 30.946261796900522 20.447002805597737 26.22743148298484 22.379303914516903 14 20.96844298439325 21.922570550056992 27.32534417996206 29.783642285587696 15 23.500140910830787 28.621583613402375 24.94661512555085 22.931660350215992 16 22.73613780939041 27.58886846499733 26.06303551373565 23.611958211876612 17 22.171933647122824 26.195393547826257 26.867909766592774 24.764763038458142 18 23.215725368296045 25.32791562736166 28.867791990376002 22.588567013966294 19 23.284217846742294 24.711833845800086 29.478686010008175 22.525262297449444 20 24.062872870388677 24.3606083422016 29.424915558658864 22.151603228750858 21 23.14344722573915 25.213013711114566 29.612446141917538 22.031092921228744 22 22.19920444969764 25.478641142877972 29.262412421464994 23.05974198595939 23 22.78247714230031 25.6175189318258 30.11825293003392 21.481750995839977 24 23.030368036656444 25.777498292945904 27.93532683601204 23.256806834385607 25 22.974354228797125 25.60174533136479 28.90550842170055 22.518392018137536 26 22.76123536034615 26.164897920268302 28.999939709793793 22.073927009591753 27 22.076030156319888 26.270545990911604 28.582324874477194 23.071098978291317 28 22.27337542430985 26.01164862867823 28.899829925534586 22.815146021477332 29 22.637289913168082 26.05784775180625 28.383437298886594 22.92142503613907 30 22.418422443660205 26.04824338174777 29.636071490163584 21.89726268442844 31 22.86008325656848 25.63805966487058 29.661098936228385 21.840758142332557 32 22.430690799574325 25.52694341273413 28.81493290260888 23.22743288508266 33 22.232644482674978 25.678440082050763 29.307700181010826 22.78121525426343 34 21.859195728649205 26.017817859080754 29.62198040708508 22.501006005184955 35 21.630373364628156 27.574496962355077 28.70479811894557 22.090331554071202 36 23.204158061291306 25.658390083242548 28.72856367697349 22.40888817849266 37 22.20530357520923 25.96601034467771 28.798808777693186 23.02987730241988 38 22.081638547594913 24.99106162640543 29.960797344987572 22.966502481012093 39 21.60478507943585 24.833606041359083 30.542247310425857 23.019361568779207 40 20.923856273756794 25.64002260181684 30.174126528111362 23.261994596315006 41 21.90897020121506 24.393137011596753 30.349949594583414 23.347943192604774 42 20.631378668764206 26.33987972804911 29.79121361380898 23.237527989377707 43 21.031887910691978 25.94953569530732 29.19469109681906 23.823885297181643 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 53.0 1 134.0 2 215.0 3 700.5 4 1186.0 5 1186.0 6 1807.0 7 2428.0 8 2585.0 9 2742.0 10 3904.5 11 5067.0 12 5067.0 13 8888.5 14 12710.0 15 19820.0 16 26930.0 17 24993.5 18 23057.0 19 23057.0 20 24835.0 21 26613.0 22 21453.5 23 16294.0 24 18323.0 25 20352.0 26 20352.0 27 22689.5 28 25027.0 29 28266.0 30 31505.0 31 35134.0 32 38763.0 33 38763.0 34 44185.5 35 49608.0 36 55281.5 37 60955.0 38 65977.0 39 70999.0 40 70999.0 41 74522.5 42 78046.0 43 83880.5 44 89715.0 45 93902.5 46 98090.0 47 98090.0 48 120903.0 49 143716.0 50 138111.0 51 132506.0 52 124013.5 53 115521.0 54 115521.0 55 104613.0 56 93705.0 57 81081.5 58 68458.0 59 61356.0 60 54254.0 61 54254.0 62 48136.0 63 42018.0 64 36564.0 65 31110.0 66 26678.0 67 22246.0 68 22246.0 69 18988.5 70 15731.0 71 13201.0 72 10671.0 73 8870.0 74 7069.0 75 7069.0 76 5601.0 77 4133.0 78 3217.5 79 2302.0 80 1779.0 81 1256.0 82 1256.0 83 942.5 84 629.0 85 488.5 86 348.0 87 262.0 88 176.0 89 176.0 90 163.0 91 150.0 92 99.0 93 48.0 94 37.0 95 26.0 96 26.0 97 15.0 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1426434.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.098744361149464 #Duplication Level Percentage of deduplicated Percentage of total 1 82.2536515938869 43.67565618754855 2 9.97132982112487 10.589301862252315 3 2.9561061653929506 4.708965767418543 4 1.3037352514255454 2.7690681932025587 5 0.7438875905585743 1.9749748502250581 6 0.4863691652922773 1.549535518380017 7 0.3497306016499121 1.2999179068595779 8 0.26354846076466437 1.1195273875933875 9 0.20445208388881297 0.977053404286473 >10 1.271075594767266 12.965543308842998 >50 0.11492994417567817 4.2801039053667 >100 0.07348987548706577 7.312000190129224 >500 0.00477549408750511 1.7221815241395908 >1k 0.0025203996572943635 2.651525615325593 >5k 1.3265261354180862E-4 0.6710520810011402 >10k+ 2.6530522708361723E-4 1.7335922974283682 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13060 0.9155698756479446 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11552 0.8098517001137102 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9527 0.6678892959646222 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4693 0.32900225317119475 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3271 0.22931309825761304 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3157 0.2213211406907014 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2986 0.20933320434033403 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2493 0.17477149310798817 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2347 0.16453617903106627 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2077 0.14560785847785457 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1760 0.12338460805056525 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1546 0.10838216138987153 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1522 0.10669964400736381 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1501 0.10522744129766957 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 7.010489093782116E-5 0.0 10 7.010489093782116E-5 0.0 0.0 2.8041956375128465E-4 0.0 11 7.010489093782116E-5 0.0 0.0 4.20629345626927E-4 0.0 12 1.4020978187564233E-4 0.0 0.0 6.309440184403905E-4 0.0 13 2.103146728134635E-4 0.0 0.0 8.41258691253854E-4 0.0 14 2.8041956375128465E-4 0.0 0.0 0.0010515733640673176 0.0 15 3.505244546891058E-4 0.0 0.0 0.001612412491569887 0.0 16 3.505244546891058E-4 0.0 0.0 0.0023835662918859197 0.0 17 3.505244546891058E-4 0.0 0.0 0.0035753494378288797 0.0 18 3.505244546891058E-4 0.0 0.0 0.004276398347207091 0.0 19 4.907342365647482E-4 0.0 0.0 0.00539807660221223 0.0 20 4.907342365647482E-4 0.0 0.0 0.0096043700584815 0.0 21 4.907342365647482E-4 0.0 0.0 0.01626433469757451 0.0 22 4.907342365647482E-4 0.0 0.0 0.02642954388355858 0.0 23 4.907342365647482E-4 0.0 0.0 0.03456171123234584 0.0 24 4.907342365647482E-4 0.0 0.0 0.04921363343835046 0.0 25 4.907342365647482E-4 0.0 0.0 0.06064073066121531 0.0 26 4.907342365647482E-4 0.0 0.0 0.0738204501575257 0.0 27 4.907342365647482E-4 0.0 0.0 0.12934352378028005 0.0 28 4.907342365647482E-4 0.0 0.0 0.25861694266962226 0.0 29 4.907342365647482E-4 0.0 0.0 0.40864140927655956 0.0 30 4.907342365647482E-4 0.0 0.0 0.6179045087259558 0.0 31 4.907342365647482E-4 0.0 0.0 0.9105223235004213 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATA 25 0.0054967823 29.6 14 TTACTCG 55 5.14393E-4 20.181818 4 GGTATCA 4335 0.0 19.929642 1 GTATTGG 855 0.0 19.906433 1 TTAACGG 140 3.6379788E-12 19.821428 35 CAATGCG 135 5.638867E-11 19.185184 19 TAGCGCA 80 1.6171154E-5 18.5 4 TAACGCT 80 1.6171154E-5 18.5 32 ACGCTAA 60 9.238305E-4 18.5 34 TCTCACG 100 2.8761315E-7 18.5 12 ATACGAT 70 1.2194591E-4 18.5 6 ATTGGAC 960 0.0 17.536457 3 TTGGACC 1120 0.0 17.508928 4 AATGCGA 160 3.45608E-11 17.34375 20 ATGCGAC 150 2.5102054E-10 17.266666 21 TATACTG 140 1.869921E-9 17.178572 5 TGGACCC 1145 0.0 16.64192 5 GGACCCT 1095 0.0 16.557077 6 GTATTAG 380 0.0 16.552631 1 TAGGGCC 90 4.447165E-5 16.444445 4 >>END_MODULE