##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088600_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1406866 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.779146699117046 31.0 31.0 34.0 30.0 34.0 2 31.95541366413006 31.0 31.0 34.0 30.0 34.0 3 32.022241634953154 33.0 31.0 34.0 30.0 34.0 4 35.69934307887176 37.0 35.0 37.0 35.0 37.0 5 35.629150182035815 37.0 35.0 37.0 33.0 37.0 6 35.67436202168508 37.0 35.0 37.0 33.0 37.0 7 35.5384855416223 37.0 35.0 37.0 33.0 37.0 8 35.56404234660586 37.0 35.0 37.0 33.0 37.0 9 37.18267482475232 39.0 37.0 39.0 33.0 39.0 10 37.05300362650032 39.0 37.0 39.0 33.0 39.0 11 37.10059238051101 39.0 37.0 39.0 33.0 39.0 12 37.00082381690936 39.0 37.0 39.0 33.0 39.0 13 37.04322231115117 39.0 37.0 39.0 33.0 39.0 14 38.073039649831614 40.0 37.0 41.0 33.0 41.0 15 38.034854065703485 40.0 37.0 41.0 33.0 41.0 16 37.930554864500245 40.0 37.0 41.0 33.0 41.0 17 37.986880058228714 40.0 37.0 41.0 33.0 41.0 18 37.96558378694204 40.0 37.0 41.0 33.0 41.0 19 37.993985923321766 40.0 37.0 41.0 33.0 41.0 20 37.8832020960063 40.0 37.0 41.0 32.0 41.0 21 37.782590523902066 40.0 37.0 41.0 32.0 41.0 22 37.62496214991335 39.0 37.0 41.0 32.0 41.0 23 37.497456047697504 39.0 36.0 41.0 32.0 41.0 24 37.358344007176235 39.0 36.0 41.0 31.0 41.0 25 37.164303494433724 39.0 36.0 41.0 31.0 41.0 26 37.31187120877184 39.0 36.0 41.0 31.0 41.0 27 37.23726424549317 39.0 36.0 41.0 31.0 41.0 28 37.10603213099186 39.0 36.0 41.0 31.0 41.0 29 36.96501799034165 39.0 36.0 41.0 31.0 41.0 30 36.829991626778956 39.0 35.0 41.0 30.0 41.0 31 36.63997352981734 39.0 35.0 40.0 30.0 41.0 32 36.50547173646957 39.0 35.0 40.0 30.0 41.0 33 36.29102203052743 38.0 35.0 40.0 30.0 41.0 34 36.14183795755957 38.0 35.0 40.0 30.0 41.0 35 35.945521464020025 38.0 35.0 40.0 29.0 41.0 36 35.799061175691214 38.0 35.0 40.0 28.0 41.0 37 35.62369976955872 38.0 35.0 40.0 27.0 41.0 38 35.52392551955908 38.0 35.0 40.0 26.0 41.0 39 35.375132386453295 38.0 34.0 40.0 26.0 41.0 40 35.19025621487761 38.0 34.0 40.0 25.0 41.0 41 35.03621382562376 38.0 34.0 40.0 24.0 41.0 42 34.79758910941056 38.0 34.0 40.0 23.0 41.0 43 34.43304124202305 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 0.0 12 2.0 13 1.0 14 2.0 15 11.0 16 16.0 17 33.0 18 103.0 19 202.0 20 456.0 21 892.0 22 1650.0 23 2922.0 24 4686.0 25 7154.0 26 10702.0 27 15240.0 28 20502.0 29 27439.0 30 34602.0 31 42785.0 32 53431.0 33 67377.0 34 84255.0 35 105285.0 36 138989.0 37 201987.0 38 269154.0 39 316985.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.37503785008664 20.7421318021759 14.014980815514768 22.867849532222685 2 19.1080742586714 23.07206230017642 35.19951438161132 22.62034905954085 3 19.969065994913517 24.660984059604825 32.483761779728844 22.886188165752817 4 13.70471672497594 16.178584172195503 36.25490984926781 33.86178925356075 5 13.137143125215905 38.1193375914977 34.56214024647692 14.181379036809478 6 32.182240526105545 36.804073735522785 13.64067366757033 17.37301207080134 7 26.186715721326692 32.748037126492505 21.462527348020352 19.602719804160454 8 27.17252389353357 34.33063276815276 18.869103382980327 19.627739955333343 9 24.677261373862187 14.368106130932157 21.68465226965468 39.269980225550974 10 17.202491210961103 26.825227136059866 32.813715023321336 23.15856662965769 11 33.38370534222875 22.391329380338995 23.22452884638622 21.000436431046026 12 21.127100946358787 27.0523276559388 30.59189716717868 21.22867423052373 13 31.766067272931465 20.68086086379229 26.281536407873958 21.27153545540229 14 20.775539390389703 22.775232324898038 27.639092848928044 28.81013543578422 15 23.520363702015686 28.80594171726376 25.38692384349327 22.286770737227286 16 21.94779033681957 27.938908183153195 26.70012638019541 23.413175099831825 17 22.00593375630657 26.518374884317343 26.903628348399916 24.57206301097617 18 23.186572139777347 24.97380702924088 29.42725177806557 22.412369052916198 19 23.385169589712167 24.53012582577161 30.3099229066592 21.774781677857025 20 24.05367675386284 24.11004317397677 30.251353007322656 21.584927064837732 21 22.98612661049453 24.836622677639518 30.787509258166736 21.389741453699216 22 21.748339927185672 25.257487209158512 30.381216121506956 22.612956742148864 23 22.31520272719648 25.66946674381213 31.323665509010805 20.691665019980583 24 22.406753734897283 25.599950528337455 29.22090661086415 22.772389125901114 25 22.357992872100116 25.717019247035612 30.09966834083701 21.825319540027266 26 22.058746177674347 26.31565479583699 30.0285172859391 21.597081740549562 27 21.297906126098717 26.4563931461845 29.70951035848475 22.536190369232038 28 21.55365187587162 26.147266335244435 29.759195260955913 22.539886527928033 29 21.94373877824896 26.117199505852014 29.296962184031745 22.642099531867284 30 21.715572058746176 26.311745397216225 30.88069510529077 21.09198743874683 31 22.173682497124815 25.857188957583737 30.815301528361623 21.15382701692983 32 21.842947373808165 25.726472883700367 29.831625755402435 22.598953987089033 33 21.63845028595474 25.847237761094515 30.306439987887973 22.20787196506277 34 20.88926735026648 26.28743604579256 30.873942507673085 21.949354096267875 35 20.61560944681299 27.994634883492814 29.845415270537494 21.54434039915671 36 22.472289471776275 25.818094971376095 29.836672433621963 21.872943123225667 37 21.46437542736835 26.458454465457265 29.69238008452831 22.38479002264608 38 21.339772231328357 25.18263999556461 31.061238241595145 22.416349531511887 39 20.861332920121743 25.032448008552343 31.725764927150134 22.38045414417578 40 20.026498614651288 25.652265389880768 31.266161809298115 23.055074186169826 41 21.07770036378731 24.679820252959413 31.368801293086907 22.87367809016637 42 19.814893529305564 26.44167959137544 30.924764689743018 22.81866218957598 43 20.091039231881357 26.38872501005782 30.115163775370217 23.405071982690604 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 75.0 1 179.0 2 283.0 3 778.0 4 1273.0 5 1273.0 6 1904.5 7 2536.0 8 2926.0 9 3316.0 10 4859.0 11 6402.0 12 6402.0 13 11578.0 14 16754.0 15 26494.0 16 36234.0 17 33433.0 18 30632.0 19 30632.0 20 32654.0 21 34676.0 22 27239.5 23 19803.0 24 21631.0 25 23459.0 26 23459.0 27 25244.5 28 27030.0 29 29384.0 30 31738.0 31 35018.0 32 38298.0 33 38298.0 34 42311.5 35 46325.0 36 51431.0 37 56537.0 38 60550.5 39 64564.0 40 64564.0 41 67821.5 42 71079.0 43 76408.0 44 81737.0 45 87603.0 46 93469.0 47 93469.0 48 117975.5 49 142482.0 50 135811.0 51 129140.0 52 120374.5 53 111609.0 54 111609.0 55 99492.5 56 87376.0 57 75922.0 58 64468.0 59 57332.5 60 50197.0 61 50197.0 62 45124.5 63 40052.0 64 34963.0 65 29874.0 66 26137.0 67 22400.0 68 22400.0 69 19218.0 70 16036.0 71 13483.0 72 10930.0 73 8974.0 74 7018.0 75 7018.0 76 5630.0 77 4242.0 78 3275.5 79 2309.0 80 1786.5 81 1264.0 82 1264.0 83 936.0 84 608.0 85 458.5 86 309.0 87 242.0 88 175.0 89 175.0 90 139.0 91 103.0 92 67.5 93 32.0 94 23.5 95 15.0 96 15.0 97 9.5 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1406866.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.52264853805341 #Duplication Level Percentage of deduplicated Percentage of total 1 83.5410848437275 46.38422292265983 2 9.723232858600902 10.797192813235005 3 2.6548802706480865 4.422179525334174 4 1.1662405710306423 2.5901106134461225 5 0.6257090187711442 1.737051096816025 6 0.4006263924700104 1.3346303030508382 7 0.2873234170020324 1.1167069969269483 8 0.19720394545841494 0.8759428283204023 9 0.15967482118204146 0.7979012079180312 >10 1.0739451636313784 11.409135626979722 >50 0.10324135222513346 4.03788266923435 >100 0.0583866834209944 5.876075763729988 >500 0.005121613231290789 1.9023343136082418 >1k 0.002816887277209934 2.937709213394872 >5k 1.2804033078226974E-4 0.4394869287613944 >10k+ 3.8412099234680917E-4 3.341437176584124 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 17901 1.2724026310963519 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16264 1.1560447121474255 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12837 0.9124536380863566 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6182 0.4394164049738923 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3366 0.239255195590767 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3362 0.23897087569107506 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3212 0.22830887945262732 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3076 0.2186420028631014 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2962 0.21053888572188112 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2395 0.17023653994054871 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1916 0.13618923195243898 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1789 0.1271620751372199 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1738 0.12353699641614767 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1710 0.1215467571183041 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1656 0.1177084384724629 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1547 0.10996072120585756 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1507 0.10711752220893815 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1476 0.10491404298632563 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.843198996919394E-4 2 0.0 0.0 0.0 0.0 2.843198996919394E-4 3 0.0 0.0 0.0 0.0 2.843198996919394E-4 4 0.0 0.0 0.0 0.0 2.843198996919394E-4 5 0.0 0.0 0.0 0.0 2.843198996919394E-4 6 7.107997492298485E-5 0.0 0.0 0.0 2.843198996919394E-4 7 7.107997492298485E-5 0.0 0.0 0.0 2.843198996919394E-4 8 7.107997492298485E-5 0.0 7.107997492298485E-5 7.107997492298485E-5 2.843198996919394E-4 9 7.107997492298485E-5 0.0 7.107997492298485E-5 5.686397993838788E-4 2.843198996919394E-4 10 1.421599498459697E-4 0.0 7.107997492298485E-5 7.818797241528333E-4 2.843198996919394E-4 11 2.1323992476895455E-4 0.0 1.421599498459697E-4 0.0011372795987677575 2.843198996919394E-4 12 2.1323992476895455E-4 0.0 1.421599498459697E-4 0.0017059193981516364 2.843198996919394E-4 13 2.1323992476895455E-4 0.0 1.421599498459697E-4 0.001848079347997606 2.843198996919394E-4 14 2.843198996919394E-4 0.0 1.421599498459697E-4 0.0020613192727665605 2.843198996919394E-4 15 2.843198996919394E-4 0.0 1.421599498459697E-4 0.0024877991223044697 2.843198996919394E-4 16 3.553998746149242E-4 0.0 1.421599498459697E-4 0.003411838796303273 3.553998746149242E-4 17 3.553998746149242E-4 0.0 1.421599498459697E-4 0.004620198369994015 3.553998746149242E-4 18 3.553998746149242E-4 0.0 1.421599498459697E-4 0.005615318018915803 3.553998746149242E-4 19 3.553998746149242E-4 0.0 1.421599498459697E-4 0.006610437667837591 4.264798495379091E-4 20 3.553998746149242E-4 0.0 1.421599498459697E-4 0.011372795987677575 4.264798495379091E-4 21 3.553998746149242E-4 0.0 1.421599498459697E-4 0.019191593229205908 4.264798495379091E-4 22 4.264798495379091E-4 0.0 1.421599498459697E-4 0.033336508238879896 4.264798495379091E-4 23 4.264798495379091E-4 0.0 1.421599498459697E-4 0.043500944652866726 4.264798495379091E-4 24 4.975598244608939E-4 0.0 1.421599498459697E-4 0.055797780314543105 4.264798495379091E-4 25 4.975598244608939E-4 0.0 1.421599498459697E-4 0.061555258283304874 4.264798495379091E-4 26 4.975598244608939E-4 0.0 1.421599498459697E-4 0.07442073374436514 4.264798495379091E-4 27 4.975598244608939E-4 0.0 1.421599498459697E-4 0.14038295047289506 4.264798495379091E-4 28 4.975598244608939E-4 0.0 1.421599498459697E-4 0.29384461633161935 4.264798495379091E-4 29 4.975598244608939E-4 0.0 1.421599498459697E-4 0.4945033855392056 4.975598244608939E-4 30 4.975598244608939E-4 0.0 1.421599498459697E-4 0.7471926963904167 4.975598244608939E-4 31 4.975598244608939E-4 0.0 1.421599498459697E-4 1.1132545672437886 4.975598244608939E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4985 0.0 25.792377 1 CGTATAC 80 1.61709E-5 18.5 3 TGTTACG 205 0.0 18.04878 16 TATACCG 95 3.607549E-6 17.526316 5 CGCTTAT 85 2.7238188E-5 17.411764 1 ACCGTTA 320 0.0 17.34375 8 TCGGGTA 215 0.0 17.209303 25 GTCGGGT 215 0.0 17.209303 24 GTATCAA 7765 0.0 16.534449 2 GTATTGG 630 0.0 16.444445 1 AGTTCCG 240 0.0 16.1875 32 GTCTAAC 105 9.345995E-6 15.857142 1 CGTACAC 70 0.002592881 15.857142 3 ACCGTCC 70 0.002592881 15.857142 8 TAGTACT 240 0.0 15.416666 4 CCGTTTA 315 0.0 15.269841 27 TAACACT 85 5.365213E-4 15.235293 4 CGGGTAA 250 0.0 14.799999 26 CTAAGGT 505 0.0 14.653466 4 CGCCGTT 385 0.0 14.415584 25 >>END_MODULE