##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088599_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1268488 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.795989398401876 31.0 31.0 34.0 30.0 34.0 2 31.983706586108816 31.0 31.0 34.0 30.0 34.0 3 32.053155410220675 33.0 31.0 34.0 30.0 34.0 4 35.731895768820834 37.0 35.0 37.0 35.0 37.0 5 35.640926835728834 37.0 35.0 37.0 33.0 37.0 6 35.68367379115924 37.0 35.0 37.0 33.0 37.0 7 35.555389566160656 37.0 35.0 37.0 33.0 37.0 8 35.57691598186187 37.0 35.0 37.0 33.0 37.0 9 37.209046518374635 39.0 37.0 39.0 33.0 39.0 10 37.06778148472827 39.0 37.0 39.0 33.0 39.0 11 37.116824124469446 39.0 37.0 39.0 33.0 39.0 12 37.013519244959355 39.0 37.0 39.0 33.0 39.0 13 37.054042292871515 39.0 37.0 39.0 33.0 39.0 14 38.12056085670499 40.0 37.0 41.0 33.0 41.0 15 38.078821399965946 40.0 37.0 41.0 33.0 41.0 16 37.98145114498521 40.0 37.0 41.0 33.0 41.0 17 38.01522678968977 40.0 37.0 41.0 33.0 41.0 18 37.98844924035545 40.0 37.0 41.0 33.0 41.0 19 38.0109665996052 40.0 37.0 41.0 33.0 41.0 20 37.89297100169651 40.0 37.0 41.0 32.0 41.0 21 37.802022565448 40.0 37.0 41.0 32.0 41.0 22 37.6572683383682 39.0 37.0 41.0 32.0 41.0 23 37.53725301303599 39.0 36.0 41.0 32.0 41.0 24 37.40304047022912 39.0 36.0 41.0 31.0 41.0 25 37.2094296516798 39.0 36.0 41.0 31.0 41.0 26 37.375380768284764 39.0 36.0 41.0 32.0 41.0 27 37.3046595631965 39.0 36.0 41.0 31.0 41.0 28 37.1877487213123 39.0 36.0 41.0 31.0 41.0 29 37.05871793820675 39.0 36.0 41.0 31.0 41.0 30 36.941176424215286 39.0 36.0 41.0 31.0 41.0 31 36.760871998789106 39.0 35.0 41.0 30.0 41.0 32 36.65000851407345 39.0 35.0 40.0 30.0 41.0 33 36.45629599964683 39.0 35.0 40.0 30.0 41.0 34 36.328282175314236 39.0 35.0 40.0 30.0 41.0 35 36.15162382300818 38.0 35.0 40.0 30.0 41.0 36 36.01686574882853 38.0 35.0 40.0 29.0 41.0 37 35.85073173731245 38.0 35.0 40.0 28.0 41.0 38 35.771949754353216 38.0 35.0 40.0 27.0 41.0 39 35.65439483857947 38.0 35.0 40.0 27.0 41.0 40 35.48112161880916 38.0 35.0 40.0 26.0 41.0 41 35.3540892779435 38.0 35.0 40.0 25.0 41.0 42 35.143550431695054 38.0 34.0 40.0 24.0 41.0 43 34.79142490902555 38.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 1.0 14 4.0 15 6.0 16 24.0 17 33.0 18 78.0 19 188.0 20 382.0 21 759.0 22 1412.0 23 2351.0 24 4012.0 25 5978.0 26 8926.0 27 12824.0 28 17687.0 29 23313.0 30 29803.0 31 37436.0 32 46976.0 33 59604.0 34 74159.0 35 94015.0 36 122630.0 37 177605.0 38 246308.0 39 301972.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.78762432123914 20.880055625279862 13.83702486740119 23.495295186079808 2 19.154694407830426 22.57262189315153 35.31637666260934 22.956307036408703 3 19.786312523256033 24.273623400457865 32.240746463506156 23.69931761277994 4 13.892129842773443 16.167121801704077 35.826669231399904 34.114079124122576 5 13.15061711265696 37.89755992961699 34.85046764336754 14.101355314358512 6 32.779261609096814 36.73649258014266 13.724528730267846 16.75971708049268 7 26.46000592831781 32.4955379948411 21.5480162208866 19.49643985595449 8 26.835176998126904 34.60962973240582 18.853627310624933 19.701565958842338 9 24.628376460794268 14.44924981552841 21.641276858748366 39.281096864928955 10 16.94371566778716 26.932142834618855 33.2625141112884 22.861627386305585 11 33.46220066725109 22.369860810665926 23.121227792458424 21.04671072962456 12 21.243322759064334 26.80364339276367 30.617711795460423 21.335322052711575 13 31.450829649157107 20.699762236615562 25.921884952794194 21.92752316143314 14 20.800433271737692 22.751180933520853 27.260092330396503 29.18829346434495 15 23.329507255882596 29.106069588360317 24.999369327892733 22.565053827864357 16 22.37790188003355 27.933965477008847 26.24534090980758 23.442791733150017 17 22.137694641179102 26.58913604228026 26.7542933003702 24.51887601617043 18 23.227259540492305 25.282068099974143 28.99215443898563 22.49851792054793 19 23.302388355270214 24.782733459047307 29.828977491312493 22.08590069436999 20 24.03381033167046 24.425536544295255 29.830396503553835 21.710256620480443 21 23.022291105631272 25.19582368930569 30.1380068238722 21.643878381190834 22 21.91435788119399 25.598744331834432 29.59499813951728 22.89189964745429 23 22.539038603439685 25.82854548091901 30.582945995547455 21.049469920093845 24 22.695129949987702 25.917233746003117 28.31189573728723 23.075740566721954 25 22.662492668436755 25.849988332566014 29.385299663851765 22.102219335145463 26 22.322166232554032 26.56099229949357 29.388295356361272 21.728546111591125 27 21.51285625090659 26.488070837091087 29.055615819779142 22.94345709222318 28 21.839465568456305 26.226263078562823 29.258376902264743 22.67589445071613 29 22.234266307604013 26.290828135544047 28.598772712079263 22.876132844772673 30 22.07273541413084 26.385507785647167 30.11530262801067 21.426454172211326 31 22.561821633314626 25.975176745858057 30.02961005543608 21.43339156539124 32 22.058939461784423 25.946638833004332 29.105517750266458 22.888903954944784 33 21.88984050302407 25.87340203454822 29.82984466545998 22.406912796967728 34 21.347225988736195 26.1188123182876 30.18924893258746 22.344712760388745 35 21.03228410517088 27.80893473174362 29.288412661373226 21.870368501712274 36 22.782951040924313 25.773440505546763 29.258534570291562 22.185073883237365 37 21.759922048927542 26.302180233474814 29.304100630041436 22.63379708755621 38 21.69843151846923 25.135436835035097 30.58988338872737 22.576248257768302 39 21.05735332143465 24.951122911686983 31.33912185215784 22.652401914720517 40 20.297787602247716 25.619004673280315 30.955673210940898 23.12753451353107 41 21.253886516861016 24.653209175017818 31.096076588820704 22.99682771930046 42 20.202240777997112 26.45945409022395 30.484009308720307 22.854295823058635 43 20.44560137738788 26.171709941284426 29.89874559317865 23.48394308814904 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 68.0 1 137.5 2 207.0 3 582.0 4 957.0 5 957.0 6 1498.5 7 2040.0 8 2223.5 9 2407.0 10 3657.0 11 4907.0 12 4907.0 13 9143.0 14 13379.0 15 20797.5 16 28216.0 17 25927.5 18 23639.0 19 23639.0 20 25523.5 21 27408.0 22 21803.5 23 16199.0 24 18189.5 25 20180.0 26 20180.0 27 22412.0 28 24644.0 29 27046.0 30 29448.0 31 32563.5 32 35679.0 33 35679.0 34 39869.5 35 44060.0 36 48499.5 37 52939.0 38 57198.5 39 61458.0 40 61458.0 41 63953.5 42 66449.0 43 71643.5 44 76838.0 45 80938.5 46 85039.0 47 85039.0 48 106737.5 49 128436.0 50 122182.5 51 115929.0 52 107366.5 53 98804.0 54 98804.0 55 89545.5 56 80287.0 57 69994.5 58 59702.0 59 53387.5 60 47073.0 61 47073.0 62 42074.0 63 37075.0 64 32471.0 65 27867.0 66 23769.5 67 19672.0 68 19672.0 69 16794.0 70 13916.0 71 11825.5 72 9735.0 73 7851.5 74 5968.0 75 5968.0 76 4800.0 77 3632.0 78 2832.5 79 2033.0 80 1534.5 81 1036.0 82 1036.0 83 800.5 84 565.0 85 420.0 86 275.0 87 211.0 88 147.0 89 147.0 90 130.5 91 114.0 92 71.0 93 28.0 94 23.0 95 18.0 96 18.0 97 12.5 98 7.0 99 7.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1268488.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.96484029290831 #Duplication Level Percentage of deduplicated Percentage of total 1 83.66159871306263 45.98446411912871 2 9.424655011371494 10.360493150315842 3 2.6017321253799386 4.290113722693117 4 1.2147134857367843 2.6706613098065723 5 0.6268928733427345 1.72285333320229 6 0.412417865790723 1.3601089276277507 7 0.3128796782039785 1.2038167080364757 8 0.22178012092193425 0.9752087141292809 9 0.17763429139162323 0.8787276411196057 >10 1.1623666102755672 12.264073703233072 >50 0.10945780964093568 4.158825481249282 >100 0.06567945536728084 6.605618796218401 >500 0.005030150579003664 1.8278581862814711 >1k 0.0027306531714591316 2.8551841602903103 >5k 1.4371858797153326E-4 0.7658535423310802 >10k+ 2.874371759430665E-4 2.076138504336818 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13753 1.084204186401448 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12529 0.987711353989947 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9695 0.7642957599914229 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4929 0.38857285208847064 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2821 0.22239075182421908 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2816 0.22199658175717862 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2709 0.2135613423225131 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2677 0.21103865389345425 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2634 0.20764879131690644 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2233 0.17603635194026274 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1502 0.11840868813894967 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1480 0.11667433984397173 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1475 0.11628016977693129 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1411 0.11123479291881358 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1360 0.10721425823500104 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1304 0.10279955348414807 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 7.8834013408089E-5 0.0 2 0.0 0.0 0.0 1.57668026816178E-4 0.0 3 0.0 0.0 0.0 1.57668026816178E-4 0.0 4 0.0 0.0 0.0 1.57668026816178E-4 0.0 5 0.0 0.0 0.0 1.57668026816178E-4 0.0 6 0.0 0.0 0.0 1.57668026816178E-4 0.0 7 0.0 0.0 0.0 3.15336053632356E-4 0.0 8 0.0 0.0 0.0 3.15336053632356E-4 0.0 9 0.0 0.0 0.0 4.73004080448534E-4 0.0 10 7.8834013408089E-5 0.0 0.0 5.51838093856623E-4 0.0 11 7.8834013408089E-5 0.0 0.0 7.883401340808901E-4 0.0 12 7.8834013408089E-5 0.0 0.0 0.001419012241345602 0.0 13 1.57668026816178E-4 0.0 0.0 0.001497846254753691 0.0 14 1.57668026816178E-4 0.0 0.0 0.001734348294977958 0.0 15 1.57668026816178E-4 0.0 0.0 0.00236502040224267 0.0 16 1.57668026816178E-4 0.0 0.0 0.003074526522915471 0.0 17 1.57668026816178E-4 0.0 0.0 0.00394170067040445 0.0 18 1.57668026816178E-4 0.0 0.0 0.00473004080448534 0.0 19 1.57668026816178E-4 0.0 0.0 0.005676048965382408 0.0 20 1.57668026816178E-4 0.0 0.0 0.009696583649194948 0.0 21 1.57668026816178E-4 0.0 0.0 0.016791644855922955 0.0 22 1.57668026816178E-4 0.0 0.0 0.028932082920768664 0.0 23 1.57668026816178E-4 0.0 0.0 0.03500230195319152 0.0 24 1.57668026816178E-4 0.0 0.0 0.044383549548754106 0.0 25 1.57668026816178E-4 0.0 0.0 0.051636278782298296 0.0 26 1.57668026816178E-4 0.0 0.0 0.06385555086055208 0.0 27 1.57668026816178E-4 0.0 0.0 0.12983962008312258 0.0 28 1.57668026816178E-4 0.0 0.0 0.2838812822825285 0.0 29 1.57668026816178E-4 0.0 0.0 0.4723734083412693 0.0 30 3.15336053632356E-4 0.0 0.0 0.7430105763712388 0.0 31 3.15336053632356E-4 0.0 0.0 1.1368653073580515 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4380 0.0 23.737442 1 ACGTTTA 60 9.2375337E-4 18.5 26 CGGTATA 50 0.0070352755 18.499998 26 CTAATAC 265 0.0 18.150944 3 CGGGTAA 115 6.406481E-8 17.695652 26 GTATTGG 485 0.0 17.16495 1 TCTAATA 250 0.0 17.02 2 TCGGGTA 120 1.041426E-7 16.958334 25 TAATACT 295 0.0 16.932203 4 GACCGTT 205 0.0 16.243902 7 ACCGTTA 205 0.0 16.243902 8 GTATCAA 6535 0.0 15.938025 2 TAGCGAA 175 1.3096724E-10 15.857143 10 TCGAACC 210 0.0 15.857142 31 ACACGGT 95 7.060598E-5 15.578948 6 CTCTAAT 265 0.0 15.358491 1 ACTCACG 110 1.4520243E-5 15.136364 6 AGTTCCG 185 3.0559022E-10 15.0 32 ATTGGAC 560 0.0 14.866071 3 TGTTACG 150 8.101961E-8 14.8 16 >>END_MODULE