##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088598_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 577108 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.773328389140335 31.0 31.0 34.0 30.0 34.0 2 31.961171912363024 31.0 31.0 34.0 30.0 34.0 3 32.028944322379864 33.0 31.0 34.0 30.0 34.0 4 35.71563901384143 37.0 35.0 37.0 35.0 37.0 5 35.62632817427587 37.0 35.0 37.0 33.0 37.0 6 35.662205341114664 37.0 35.0 37.0 33.0 37.0 7 35.53160067093161 37.0 35.0 37.0 33.0 37.0 8 35.55625810073678 37.0 35.0 37.0 33.0 37.0 9 37.184812894640174 39.0 37.0 39.0 33.0 39.0 10 37.041113621713784 39.0 37.0 39.0 33.0 39.0 11 37.086134657637736 39.0 37.0 39.0 33.0 39.0 12 36.98858099350555 39.0 37.0 39.0 33.0 39.0 13 37.02800342396917 39.0 37.0 39.0 33.0 39.0 14 38.08926232178379 40.0 37.0 41.0 33.0 41.0 15 38.040326940537994 40.0 37.0 41.0 33.0 41.0 16 37.93257761112305 40.0 37.0 41.0 33.0 41.0 17 37.9639252964783 40.0 37.0 41.0 33.0 41.0 18 37.94807904239761 40.0 37.0 41.0 33.0 41.0 19 37.97135718097826 40.0 37.0 41.0 33.0 41.0 20 37.845306251169625 40.0 37.0 41.0 32.0 41.0 21 37.744489766213604 40.0 37.0 41.0 32.0 41.0 22 37.595124309488 39.0 37.0 41.0 32.0 41.0 23 37.479835663342044 39.0 36.0 41.0 32.0 41.0 24 37.336358185989454 39.0 36.0 41.0 31.0 41.0 25 37.132990705379235 39.0 36.0 41.0 31.0 41.0 26 37.29938763628299 39.0 36.0 41.0 31.0 41.0 27 37.21940780581797 39.0 36.0 41.0 31.0 41.0 28 37.104587009710485 39.0 36.0 41.0 31.0 41.0 29 36.96764903622892 39.0 36.0 41.0 31.0 41.0 30 36.84415568663058 39.0 35.0 41.0 30.0 41.0 31 36.6825048344504 39.0 35.0 40.0 30.0 41.0 32 36.57109934362372 39.0 35.0 40.0 30.0 41.0 33 36.376537840404225 39.0 35.0 40.0 30.0 41.0 34 36.22560248688287 38.0 35.0 40.0 30.0 41.0 35 36.04600005544889 38.0 35.0 40.0 29.0 41.0 36 35.91688730705518 38.0 35.0 40.0 29.0 41.0 37 35.758771321832306 38.0 35.0 40.0 27.0 41.0 38 35.670741005149814 38.0 35.0 40.0 27.0 41.0 39 35.53338716496739 38.0 35.0 40.0 26.0 41.0 40 35.37596602369054 38.0 34.0 40.0 25.0 41.0 41 35.24848381931978 38.0 34.0 40.0 25.0 41.0 42 35.031981882074064 38.0 34.0 40.0 24.0 41.0 43 34.668400022179554 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 4.0 16 5.0 17 17.0 18 45.0 19 86.0 20 168.0 21 357.0 22 611.0 23 1166.0 24 1854.0 25 2870.0 26 4335.0 27 5962.0 28 8256.0 29 10888.0 30 14009.0 31 17499.0 32 21909.0 33 27519.0 34 34383.0 35 43186.0 36 56307.0 37 80815.0 38 113161.0 39 131695.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.67348225981965 20.754174262009883 13.948515702433514 23.62382777573695 2 19.150834852401978 22.38489156275775 35.275199789294206 23.189073795546065 3 19.919148582241107 24.267208217526008 31.981015685105735 23.83262751512715 4 14.277050396113033 16.273210560241758 35.41780741213083 34.031931631514375 5 13.43162804882275 37.46179224685847 34.86955647816353 14.237023226155243 6 33.05811044033353 36.22840092322407 13.816824580494465 16.896664055947934 7 26.50283829023337 32.1466692542817 21.650540280155532 19.6999521753294 8 26.29889032901987 34.9910242103731 18.99453828399537 19.715547176611654 9 24.621561302217263 14.622739591203032 21.518849158216486 39.236849948363215 10 17.16351185566653 26.69483008379714 33.34887057535158 22.79278748518475 11 33.6054949853407 22.21040082618851 23.003493280287227 21.180610908183564 12 21.06070267610222 26.835185095337444 30.445081336595575 21.65903089196476 13 31.21495456656293 20.64587564199422 26.02840369566875 22.1107660957741 14 20.912896719504843 22.74513609237786 27.01036894307478 29.33159824504252 15 23.636650332346807 28.80847259091886 25.008490611809226 22.54638646492511 16 22.498561794326193 27.652189884735613 26.420184783437417 23.42906353750078 17 22.303451000505973 26.555861294593043 26.587397852741603 24.553289852159388 18 23.250240856130915 25.368042030261233 28.75077108617451 22.63094602743334 19 23.51431621117711 24.75117309065201 29.576786320757986 22.157724377412894 20 24.126853205985707 24.378106004422047 29.53104098366337 21.96399980592887 21 23.08614678708318 25.111764175856166 29.907746903525855 21.894342133534796 22 22.08269509346604 25.544092266958696 29.441976198562486 22.93123644101277 23 22.65121952910027 25.656722831774985 30.447680503475954 21.244377135648786 24 22.772860539101867 25.90624285229108 28.163705926793597 23.157190681813454 25 22.750854259514682 25.755837728813326 29.184658677405267 22.308649334266722 26 22.57081863360064 26.46610339832406 29.148616896664052 21.81446107141124 27 21.84131912917513 26.41654594980489 28.74418653007756 22.997948390942426 28 22.04769297947698 26.110883924672677 29.124011450196498 22.717411645653847 29 22.454029401775752 26.09840792364687 28.602445296201058 22.84511737837632 30 22.35248861564906 26.164600040200447 29.85645667708644 21.626454667064053 31 22.550371854141684 25.657069387359037 29.942402461930868 21.850156296568407 32 22.345730781760086 25.671624721889142 28.963382936989262 23.019261559361507 33 21.968158472937475 25.863269959868862 29.526362483278696 22.64220908391497 34 21.66856117052614 25.875399405310617 30.127289866021613 22.32874955814163 35 21.339506643470546 27.46868870298107 29.05712622247482 22.13467843107356 36 22.954628942936157 25.625532829210478 29.127477006037 22.292361221816368 37 21.89451541132682 25.96896941300415 29.125744228116744 23.010770947552277 38 21.938354692709165 24.97816699820484 30.362601107591647 22.720877201494346 39 21.436368929212556 24.817885040581658 30.88070170574658 22.8650443244592 40 20.543988300283484 25.556048434608424 30.67554079998891 23.22442246511918 41 21.61033983240572 24.534749128412706 30.692175468023315 23.162735571158258 42 20.581416303360896 26.269606382167638 30.028174968983272 23.120802345488194 43 20.735113704887127 25.922704242533463 29.594633933336567 23.747548119242843 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 33.0 1 71.0 2 109.0 3 271.0 4 433.0 5 433.0 6 699.5 7 966.0 8 1047.0 9 1128.0 10 1712.5 11 2297.0 12 2297.0 13 4164.0 14 6031.0 15 9022.5 16 12014.0 17 11034.0 18 10054.0 19 10054.0 20 10952.5 21 11851.0 22 9397.5 23 6944.0 24 7721.5 25 8499.0 26 8499.0 27 9356.5 28 10214.0 29 11248.5 30 12283.0 31 13905.5 32 15528.0 33 15528.0 34 17458.5 35 19389.0 36 21885.5 37 24382.0 38 26307.0 39 28232.0 40 28232.0 41 29446.5 42 30661.0 43 33400.5 44 36140.0 45 38095.0 46 40050.0 47 40050.0 48 49660.5 49 59271.0 50 56162.0 51 53053.0 52 49547.0 53 46041.0 54 46041.0 55 41420.0 56 36799.0 57 31829.5 58 26860.0 59 24187.5 60 21515.0 61 21515.0 62 19143.0 63 16771.0 64 14559.0 65 12347.0 66 10615.0 67 8883.0 68 8883.0 69 7742.5 70 6602.0 71 5638.5 72 4675.0 73 3814.5 74 2954.0 75 2954.0 76 2415.0 77 1876.0 78 1450.0 79 1024.0 80 808.5 81 593.0 82 593.0 83 438.0 84 283.0 85 218.5 86 154.0 87 121.0 88 88.0 89 88.0 90 69.0 91 50.0 92 33.0 93 16.0 94 12.0 95 8.0 96 8.0 97 7.0 98 6.0 99 3.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 577108.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.45687419774233 #Duplication Level Percentage of deduplicated Percentage of total 1 86.0367488107496 52.015128992342454 2 7.590291357468081 9.177705794453173 3 2.3259587808337265 4.218605922059962 4 1.0756910324260918 2.601316696920952 5 0.6597885674293646 1.9944377209092863 6 0.43970612515343505 1.5949954735426781 7 0.31686261413380035 1.3409566240458457 8 0.2280841392482628 1.1031403290426056 9 0.1798803738186413 0.9787504617536812 >10 1.0123452897118448 11.473719967953336 >50 0.08285717889947837 3.4070101464767424 >100 0.04603176011351372 4.923536168833084 >500 0.003164683507803923 1.1897052811960784 >1k 0.0020138895049661328 2.049632607253595 >5k 5.753970014188951E-4 1.9313578132165579 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5573 0.9656771349556755 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5531 0.9583994676906229 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3970 0.6879128343394997 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2204 0.3819042536232386 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1154 0.19996257199692258 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1149 0.19909618303679727 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1133 0.19632373836439626 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1116 0.1933780158999702 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1058 0.18332790396251655 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 942 0.16322768008760924 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 675 0.11696250961691745 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 669 0.11592284286476708 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 605 0.10483306417516304 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 604 0.104659786383138 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 595 0.10310028625491242 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 588 0.10188734171073699 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 5.198333760751887E-4 0.0 10 0.0 0.0 0.0 5.198333760751887E-4 0.0 11 0.0 0.0 0.0 0.0012129445441754403 0.0 12 0.0 0.0 0.0 0.0015595001282255661 0.0 13 0.0 0.0 0.0 0.001732777920250629 0.0 14 1.732777920250629E-4 0.0 0.0 0.002079333504300755 0.0 15 1.732777920250629E-4 0.0 0.0 0.002252611296325818 0.0 16 1.732777920250629E-4 0.0 0.0 0.0027724446724010066 0.0 17 1.732777920250629E-4 0.0 0.0 0.003292278048476195 0.0 18 1.732777920250629E-4 0.0 0.0 0.003465555840501258 0.0 19 1.732777920250629E-4 0.0 0.0 0.004505222592651636 0.0 20 1.732777920250629E-4 0.0 0.0 0.00779750064112783 0.0 21 1.732777920250629E-4 0.0 0.0 0.015941556866305787 0.0 22 1.732777920250629E-4 0.0 0.0 0.032056391524636636 0.0 23 1.732777920250629E-4 0.0 0.0 0.040373725541839656 0.0 24 3.465555840501258E-4 0.0 0.0 0.053023004359669244 0.0 25 3.465555840501258E-4 0.0 0.0 0.06341967188117302 0.0 26 3.465555840501258E-4 0.0 0.0 0.07745517303520312 0.0 27 3.465555840501258E-4 0.0 0.0 0.13931534478815058 0.0 28 3.465555840501258E-4 0.0 0.0 0.2869480235935042 0.0 29 3.465555840501258E-4 0.0 0.0 0.4735682056044969 0.0 30 3.465555840501258E-4 0.0 0.0 0.7099191139266827 0.0 31 3.465555840501258E-4 0.0 0.0 1.0769214774357658 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGTG 25 0.0054941033 29.6 7 TAATACT 90 1.4188117E-10 24.666666 4 GATATAA 40 0.0019300281 23.125002 1 GGTATCA 1905 0.0 23.015747 1 AATACTG 140 0.0 21.142857 5 ATAAGAC 45 0.0038235348 20.555555 3 CCGACCG 55 5.13883E-4 20.181818 9 TAACACT 65 6.894521E-5 19.923077 4 TAAGACT 150 0.0 19.733332 4 TTAACGG 125 4.110916E-10 19.24 35 AACGGCC 155 1.8189894E-12 19.096775 37 GTATTAG 180 0.0 18.5 1 GCTATAC 50 0.0070307404 18.5 3 TAACGGC 130 6.9303496E-10 18.5 36 TACGGCT 50 0.0070307404 18.5 4 ACTTAGC 50 0.0070307404 18.5 8 GTTTAAC 135 1.1477823E-9 17.814816 33 CTAATAC 125 8.552888E-9 17.76 3 TTAGACT 75 2.0650205E-4 17.266666 4 TTTACAC 65 0.0015786455 17.076923 3 >>END_MODULE