##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088594_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3556139 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.586378653927756 31.0 31.0 34.0 30.0 34.0 2 31.77667014703306 31.0 31.0 34.0 30.0 34.0 3 31.851462217871685 31.0 31.0 34.0 30.0 34.0 4 35.5573502610556 37.0 35.0 37.0 33.0 37.0 5 35.46187311575841 37.0 35.0 37.0 33.0 37.0 6 35.49664903424754 37.0 35.0 37.0 33.0 37.0 7 35.37157012141539 37.0 35.0 37.0 33.0 37.0 8 35.391466419057295 37.0 35.0 37.0 33.0 37.0 9 36.97662211741442 39.0 37.0 39.0 33.0 39.0 10 36.82655824195848 39.0 37.0 39.0 32.0 39.0 11 36.874020391216426 39.0 37.0 39.0 33.0 39.0 12 36.77331397900926 39.0 37.0 39.0 32.0 39.0 13 36.82051573349636 39.0 37.0 39.0 32.0 39.0 14 37.839296214236846 40.0 37.0 41.0 32.0 41.0 15 37.79618232020739 40.0 37.0 41.0 32.0 41.0 16 37.685302796094305 39.0 37.0 41.0 32.0 41.0 17 37.708366292768645 39.0 37.0 41.0 32.0 41.0 18 37.68081843819941 39.0 37.0 41.0 32.0 41.0 19 37.70642289291842 40.0 37.0 41.0 32.0 41.0 20 37.58004959873616 39.0 37.0 41.0 32.0 41.0 21 37.47444180331534 39.0 36.0 41.0 32.0 41.0 22 37.32252282602002 39.0 36.0 41.0 31.0 41.0 23 37.193035480334146 39.0 36.0 41.0 31.0 41.0 24 37.05623542836768 39.0 36.0 41.0 31.0 41.0 25 36.86197980450145 39.0 36.0 40.0 30.0 41.0 26 37.01354334012253 39.0 36.0 40.0 31.0 41.0 27 36.9420388235668 39.0 36.0 41.0 31.0 41.0 28 36.82018335053832 39.0 35.0 41.0 30.0 41.0 29 36.67355297416665 39.0 35.0 40.0 30.0 41.0 30 36.5649346102613 39.0 35.0 40.0 30.0 41.0 31 36.38781020651892 39.0 35.0 40.0 30.0 41.0 32 36.26978107436183 38.0 35.0 40.0 30.0 41.0 33 36.0735421196978 38.0 35.0 40.0 29.0 41.0 34 35.932431493819564 38.0 35.0 40.0 29.0 41.0 35 35.75798330717669 38.0 35.0 40.0 27.0 41.0 36 35.62203080363282 38.0 35.0 40.0 27.0 41.0 37 35.46506365471091 38.0 34.0 40.0 26.0 41.0 38 35.38331713130449 38.0 34.0 40.0 26.0 41.0 39 35.247046304995386 38.0 34.0 40.0 25.0 41.0 40 35.06702353310711 38.0 34.0 40.0 24.0 41.0 41 34.94800962504559 38.0 34.0 40.0 24.0 41.0 42 34.74175925069296 38.0 33.0 40.0 23.0 41.0 43 34.38727788761913 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 4.0 14 7.0 15 17.0 16 53.0 17 98.0 18 269.0 19 667.0 20 1394.0 21 2776.0 22 5075.0 23 8701.0 24 14085.0 25 21632.0 26 31356.0 27 43536.0 28 58946.0 29 76500.0 30 97081.0 31 119292.0 32 145807.0 33 178741.0 34 219706.0 35 272181.0 36 353535.0 37 499343.0 38 697204.0 39 708129.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.447001931026875 21.37157743271565 13.751009170338953 23.430411465918514 2 19.367437549544604 23.07738814483911 34.5166766540903 23.038497651525994 3 20.353253908241495 24.587171648802254 31.90263372719683 23.156940715759422 4 14.325958574735125 16.423148813924314 35.768483740371224 33.48240887096933 5 13.308928587999514 38.131664707144466 34.69330079617248 13.866105908683545 6 32.88605985311598 36.77873671417231 13.747578483293257 16.587624949418455 7 26.544434849143972 32.369572730424764 21.616955917639892 19.46903650279137 8 26.89152476885746 34.639422137323656 18.975664337080186 19.4933887567387 9 24.67847854091193 14.394150509864772 21.518478327196995 39.4088926220263 10 16.799005888127542 27.08631468005047 33.581561350667116 22.53311808115487 11 33.660017226548234 22.2525328734338 23.103427621923665 20.984022278094304 12 20.93087474927161 26.81132542906787 30.82140490008968 21.43639492157084 13 31.330861926375768 20.65436699746551 26.138685805026178 21.87608527113254 14 20.70197481032097 22.567228108912506 27.384925054954262 29.345872025812263 15 23.43021462321917 28.94588766074667 25.11282601720574 22.51107169882842 16 22.389422910634256 27.898431416769704 26.431475260106534 23.280670412489503 17 22.095002473187915 26.45610871791007 26.981622484385454 24.46726632451656 18 23.08171868422466 25.356882844005817 29.060281389450747 22.50111708231877 19 23.15561905763526 24.764892485923635 29.927289118901147 22.152199337539955 20 23.92459912281269 24.433746824856957 29.84351849013776 21.79813556219259 21 22.95900132137692 25.217124527472066 30.129530932283583 21.69434321886743 22 21.92661760409253 25.687325495431985 29.689953064264362 22.696103836211126 23 22.630077170774257 25.733021122065253 30.6121048699165 21.02479683724399 24 22.7099390659364 25.86808333420038 28.41323131632369 23.008746283539537 25 22.73215417057657 25.77399252391428 29.277989414924445 22.215863890584707 26 22.388691780608124 26.494521164667635 29.43239845236646 21.68438860235778 27 21.755280094506993 26.474358848177758 28.986099812183948 22.784261245131308 28 21.95004188531438 26.227321260501906 29.321407290322455 22.501229563861255 29 22.307255143851236 26.191074083437123 28.842067197035888 22.659603575675753 30 22.18819343113416 26.21666363435175 30.147106173296372 21.448036761217715 31 22.52712843901771 25.94479574617303 30.068369093559056 21.45970672125021 32 22.194886082911832 25.831667434821863 29.17180683882154 22.80163964344476 33 21.93972170379167 25.898425230284865 29.74996196717845 22.411891098745016 34 21.600730455136876 26.218350857488982 30.000036556501307 22.18088213087284 35 21.22318615779642 27.806899561575065 29.1775152771025 21.792399003526015 36 22.849050613600873 25.918868750630953 29.1087046934892 22.123375942278972 37 21.92566151098143 26.24517770537091 29.25144377089872 22.577717012748938 38 21.856485362355073 25.151463427048267 30.368722932371316 22.623328278225344 39 21.291293731769205 25.145108219898045 30.957760649963344 22.60583739836941 40 20.672195321948887 25.779026072940344 30.613539009583146 22.93523959552762 41 21.644260812077366 24.65494177814759 30.69351338628777 23.00728402348727 42 20.466719664220097 26.47627103439995 30.09010615164368 22.96690314973627 43 20.866872751599416 26.170461840777314 29.488695464378644 23.473969943244626 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 210.0 1 397.0 2 584.0 3 1567.5 4 2551.0 5 2551.0 6 4121.0 7 5691.0 8 6243.0 9 6795.0 10 10105.0 11 13415.0 12 13415.0 13 25014.5 14 36614.0 15 55911.0 16 75208.0 17 69609.5 18 64011.0 19 64011.0 20 70367.5 21 76724.0 22 61678.0 23 46632.0 24 52447.0 25 58262.0 26 58262.0 27 64313.0 28 70364.0 29 76908.5 30 83453.0 31 92332.5 32 101212.0 33 101212.0 34 113001.0 35 124790.0 36 137888.5 37 150987.0 38 162613.5 39 174240.0 40 174240.0 41 181559.0 42 188878.0 43 202349.5 44 215821.0 45 227493.5 46 239166.0 47 239166.0 48 295150.0 49 351134.0 50 336761.0 51 322388.0 52 301583.0 53 280778.0 54 280778.0 55 253583.5 56 226389.0 57 196142.5 58 165896.0 59 149102.0 60 132308.0 61 132308.0 62 117706.0 63 103104.0 64 89799.5 65 76495.0 66 65251.5 67 54008.0 68 54008.0 69 46494.5 70 38981.0 71 33147.5 72 27314.0 73 22471.0 74 17628.0 75 17628.0 76 14316.0 77 11004.0 78 8597.5 79 6191.0 80 4769.5 81 3348.0 82 3348.0 83 2505.0 84 1662.0 85 1310.0 86 958.0 87 708.5 88 459.0 89 459.0 90 386.5 91 314.0 92 209.0 93 104.0 94 75.5 95 47.0 96 47.0 97 33.0 98 19.0 99 10.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3556139.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.82617172295789 #Duplication Level Percentage of deduplicated Percentage of total 1 78.17931620311093 35.82658769507185 2 11.833323354807243 10.845518162213697 3 4.054605983430958 5.574212101969189 4 1.8343687862026252 3.362483959990213 5 0.9593672883513706 2.1982065050689186 6 0.5785481018280231 1.5907586798617386 7 0.38436966381934157 1.2329933153496517 8 0.28921489226101255 1.0602889054071938 9 0.2325710454110885 0.9592056598316742 >10 1.3843621697153923 12.340084347541941 >50 0.15216072689441246 4.83081266554726 >100 0.10334403373243387 9.192151631399865 >500 0.00922196836374556 2.938023728235115 >1k 0.004610984180761374 3.7721100749021295 >5k 3.6887873446090995E-4 1.1833291899584302 >10k+ 2.459191563072733E-4 3.093233377651152 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 35887 1.009156278761882 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 34380 0.9667788576318304 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25375 0.7135547851194793 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14149 0.3978753361440596 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8063 0.22673466925786645 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7450 0.2094968728725171 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7113 0.20002030291841796 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7113 0.20002030291841796 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6705 0.18854718558526537 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5557 0.1562649828929634 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4139 0.11639027608313399 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3866 0.10871341080874511 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3811 0.10716678959961914 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3790 0.10657626150158922 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 2.812038562047209E-5 0.0 0.0 0.0 0.0 6 8.436115686141627E-5 0.0 0.0 0.0 0.0 7 8.436115686141627E-5 0.0 0.0 0.0 0.0 8 1.1248154248188836E-4 0.0 0.0 0.0 0.0 9 1.6872231372283254E-4 0.0 0.0 1.1248154248188836E-4 0.0 10 2.2496308496377672E-4 0.0 0.0 1.9684269934330464E-4 0.0 11 2.530834705842488E-4 0.0 0.0 3.655650130661372E-4 0.0 12 2.812038562047209E-4 0.0 0.0 7.030096405118022E-4 0.0 13 2.812038562047209E-4 0.0 0.0 7.873707973732186E-4 0.0 14 3.655650130661372E-4 0.0 0.0 8.998523398551069E-4 0.0 15 3.655650130661372E-4 0.0 0.0 0.0013216581241621882 2.812038562047209E-5 16 3.936853986866093E-4 0.0 0.0 0.00188406583657163 2.812038562047209E-5 17 3.936853986866093E-4 0.0 0.0 0.003065122032631458 2.812038562047209E-5 18 4.2180578430708133E-4 0.0 0.0 0.003430687045697595 2.812038562047209E-5 19 4.2180578430708133E-4 0.0 0.0 0.004583622856136951 2.812038562047209E-5 20 4.2180578430708133E-4 0.0 0.0 0.007845587588111713 2.812038562047209E-5 21 4.2180578430708133E-4 0.0 0.0 0.012907256999796689 2.812038562047209E-5 22 4.2180578430708133E-4 0.0 0.0 0.02030291841798085 2.812038562047209E-5 23 4.2180578430708133E-4 0.0 0.0 0.025983236313316213 2.812038562047209E-5 24 5.061669411684976E-4 0.0 0.0 0.03495363932624681 2.812038562047209E-5 25 5.061669411684976E-4 0.0 0.0 0.041112003777130195 2.812038562047209E-5 26 5.061669411684976E-4 0.0 0.0 0.05112286105801826 2.812038562047209E-5 27 5.061669411684976E-4 0.0 0.0 0.10083970283501292 2.812038562047209E-5 28 5.342873267889697E-4 0.0 0.0 0.20831581667645724 2.812038562047209E-5 29 5.624077124094418E-4 0.0 0.0 0.3417751668312178 2.812038562047209E-5 30 5.905280980299139E-4 0.0 0.0 0.531503408612543 2.812038562047209E-5 31 5.905280980299139E-4 0.0 0.0 0.8106544766669694 2.812038562047209E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11910 0.0 21.746431 1 GTATTAG 880 0.0 16.1875 1 CTAATAC 915 0.0 15.366119 3 TAATACT 935 0.0 15.037434 4 AATACTG 935 0.0 15.037434 5 TACGTGC 185 3.0559022E-10 15.0 8 GTATTGG 1755 0.0 14.757834 1 GTATCAA 17565 0.0 14.703103 2 TCTAATA 965 0.0 14.569947 2 TTACGCA 90 8.280022E-4 14.388889 4 CTCTAAT 810 0.0 14.388889 1 TTGGACC 2415 0.0 14.171843 4 ATTAGAG 795 0.0 13.962263 3 TTAACGG 545 0.0 13.917431 35 TGGACCC 2455 0.0 13.8655815 5 TATACCG 255 1.8189894E-12 13.784313 5 TTATGCG 420 0.0 13.654763 4 TAAACGT 190 7.1413524E-9 13.631579 4 ACCGTTA 560 0.0 13.544643 8 GGTAAGA 580 0.0 13.396551 2 >>END_MODULE