##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088592_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3013114 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.71559157735154 31.0 31.0 34.0 30.0 34.0 2 31.900584909830826 31.0 31.0 34.0 30.0 34.0 3 31.97537431374983 31.0 31.0 34.0 30.0 34.0 4 35.65917917476737 37.0 35.0 37.0 33.0 37.0 5 35.57035877168936 37.0 35.0 37.0 33.0 37.0 6 35.60451048317455 37.0 35.0 37.0 33.0 37.0 7 35.47666931951463 37.0 35.0 37.0 33.0 37.0 8 35.49752183289447 37.0 35.0 37.0 33.0 37.0 9 37.110594222455575 39.0 37.0 39.0 33.0 39.0 10 36.97841070732803 39.0 37.0 39.0 33.0 39.0 11 37.01646436211839 39.0 37.0 39.0 33.0 39.0 12 36.92384622686032 39.0 37.0 39.0 33.0 39.0 13 36.96380389192045 39.0 37.0 39.0 33.0 39.0 14 38.01562436734886 40.0 37.0 41.0 33.0 41.0 15 37.974108181768095 40.0 37.0 41.0 33.0 41.0 16 37.86575416661965 40.0 37.0 41.0 32.0 41.0 17 37.8934451202311 40.0 37.0 41.0 33.0 41.0 18 37.866173334298004 40.0 37.0 41.0 33.0 41.0 19 37.889363296576235 40.0 37.0 41.0 32.0 41.0 20 37.76614691644591 40.0 37.0 41.0 32.0 41.0 21 37.66376811498005 40.0 37.0 41.0 32.0 41.0 22 37.51677434043319 39.0 36.0 41.0 32.0 41.0 23 37.38352647792284 39.0 36.0 41.0 31.0 41.0 24 37.2443754202463 39.0 36.0 41.0 31.0 41.0 25 37.05686774546201 39.0 36.0 41.0 31.0 41.0 26 37.20874782699891 39.0 36.0 41.0 31.0 41.0 27 37.142371314195216 39.0 36.0 41.0 31.0 41.0 28 37.02358423876428 39.0 36.0 41.0 31.0 41.0 29 36.88291083576659 39.0 35.0 41.0 30.0 41.0 30 36.766138951264374 39.0 35.0 41.0 30.0 41.0 31 36.579777266973636 39.0 35.0 40.0 30.0 41.0 32 36.45826709510493 39.0 35.0 40.0 30.0 41.0 33 36.25661923179807 38.0 35.0 40.0 30.0 41.0 34 36.11657109555098 38.0 35.0 40.0 30.0 41.0 35 35.934093432906955 38.0 35.0 40.0 29.0 41.0 36 35.794705079197136 38.0 35.0 40.0 27.0 41.0 37 35.628896882096065 38.0 35.0 40.0 27.0 41.0 38 35.544816425797364 38.0 35.0 40.0 26.0 41.0 39 35.408848453792324 38.0 34.0 40.0 26.0 41.0 40 35.232153844826314 38.0 34.0 40.0 25.0 41.0 41 35.10552504817275 38.0 34.0 40.0 24.0 41.0 42 34.88937325305315 38.0 34.0 40.0 23.0 41.0 43 34.54019263791546 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 0.0 13 3.0 14 8.0 15 22.0 16 42.0 17 90.0 18 190.0 19 422.0 20 946.0 21 2098.0 22 3858.0 23 6530.0 24 10677.0 25 16341.0 26 24039.0 27 34009.0 28 46359.0 29 61382.0 30 76864.0 31 95043.0 32 117945.0 33 145100.0 34 179354.0 35 224482.0 36 293047.0 37 417626.0 38 582660.0 39 673973.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.82566607171186 20.982445403658804 13.5825262502514 23.609362274377936 2 19.064595630965176 22.60740881360612 35.167736766680584 23.16025878874812 3 19.991477255756003 24.473252588518058 32.09573218935626 23.439537966369674 4 14.07490722222923 16.063215663263986 35.91679571367031 33.94508140083647 5 13.22545379962391 37.807597057396436 34.9544690310423 14.01248011193735 6 32.88903108212965 36.477345364297534 13.760315739796106 16.873307813776712 7 26.46471391391099 32.4429477278324 21.651288334925265 19.441050023331343 8 26.672040951653344 34.57901028636819 19.13648139433158 19.612467367646893 9 24.476737355440253 14.525271861602315 21.806011986270683 39.19197879668675 10 16.750743582884684 26.830315746433758 33.63739307573494 22.781547594946623 11 33.22310407107066 22.007995714732335 23.53113755403878 21.23776266015823 12 20.96117173130522 26.604237343824362 30.954620369491497 21.479970555378923 13 31.26131304690098 20.56201657156019 26.437001719815445 21.739668661723385 14 20.646547060615696 22.58503992879128 27.43776040335679 29.330652607236235 15 23.208879584376827 28.79217314711624 25.373218537366988 22.625728731139944 16 22.254252577234052 27.88072406155227 26.557209584502946 23.307813776710738 17 22.0091573037064 26.244012008838695 26.996522534494215 24.75030815296069 18 23.17818044720512 25.202332205153873 29.215157474957802 22.40432987268321 19 23.181200578537688 24.51643051009686 30.007626661321147 22.294742250044305 20 24.112662182711972 24.110040310456228 29.98562284732672 21.791674659505084 21 23.0378604991381 25.002638466383946 30.277845444944994 21.681655589532955 22 21.762601746897065 25.376371421725164 29.971716967894345 22.889309863483426 23 22.55656440479849 25.55591988885917 30.979577938305685 20.907937768036653 24 22.752441494082202 25.544403563887723 28.560519117431337 23.142635824598738 25 22.692901762097286 25.716551049844117 29.410238046087866 22.18030914197073 26 22.527856563010893 26.216897203358386 29.507081378268463 21.74816485536226 27 21.560485265409802 26.474537637805938 29.160064969330733 22.804912127453527 28 21.898872727683056 25.99168169541544 29.411432823318336 22.698012753583168 29 22.20324222714441 26.023243727253597 28.90962638652238 22.86388765907961 30 22.200122531042634 26.032337309507703 30.2688514274601 21.498688731989564 31 22.628416979908494 25.582802376544667 30.275124007920045 21.513656635626795 32 22.355012123670065 25.481976453595852 29.282430070684352 22.880581352049738 33 21.979818885047166 25.6390896594022 29.91307331883228 22.46801813671836 34 21.418273586727885 26.173121893164346 30.252555993566787 22.15604852654098 35 21.208855688832216 27.861043425505972 29.188640058092723 21.741460827569085 36 22.912077007375096 25.646590205349018 29.322056848828154 22.119275938447732 37 21.99734228442734 26.084675189853424 29.262483928586835 22.6554985971324 38 22.01728842652485 24.84413135380872 30.43967138316041 22.69890883650602 39 21.365902518125765 24.854519278062494 31.08289298048464 22.696685223327094 40 20.55972658186846 25.587216414646107 30.67603814525438 23.17701885823105 41 21.77906312207238 24.51901919409621 30.704414104477955 22.997503579353452 42 20.499158013935084 26.399366237055748 30.133443341340556 22.968032407668613 43 20.848298471282533 26.269201895447697 29.326006251339976 23.55649338192979 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 170.0 1 341.5 2 513.0 3 1461.0 4 2409.0 5 2409.0 6 3651.5 7 4894.0 8 5369.0 9 5844.0 10 8733.0 11 11622.0 12 11622.0 13 21509.0 14 31396.0 15 46948.0 16 62500.0 17 58305.5 18 54111.0 19 54111.0 20 60151.0 21 66191.0 22 52799.5 23 39408.0 24 44144.5 25 48881.0 26 48881.0 27 53312.0 28 57743.0 29 63709.5 30 69676.0 31 77370.0 32 85064.0 33 85064.0 34 94684.0 35 104304.0 36 114923.5 37 125543.0 38 134432.0 39 143321.0 40 143321.0 41 149933.0 42 156545.0 43 167896.5 44 179248.0 45 190865.5 46 202483.0 47 202483.0 48 257063.0 49 311643.0 50 296457.0 51 281271.0 52 262113.5 53 242956.0 54 242956.0 55 217363.5 56 191771.0 57 165082.0 58 138393.0 59 123721.0 60 109049.0 61 109049.0 62 96778.0 63 84507.0 64 74106.0 65 63705.0 66 54791.5 67 45878.0 68 45878.0 69 39562.0 70 33246.0 71 28113.0 72 22980.0 73 18990.0 74 15000.0 75 15000.0 76 12057.0 77 9114.0 78 7184.5 79 5255.0 80 4144.0 81 3033.0 82 3033.0 83 2320.5 84 1608.0 85 1237.5 86 867.0 87 663.5 88 460.0 89 460.0 90 396.0 91 332.0 92 215.5 93 99.0 94 76.0 95 53.0 96 53.0 97 36.5 98 20.0 99 14.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3013114.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.218363964398314 #Duplication Level Percentage of deduplicated Percentage of total 1 78.78450562995832 36.412909559606014 2 11.490693280458446 10.62162088478989 3 3.8459513189960304 5.332607335521489 4 1.6679319329733993 3.083563405840279 5 0.9338966321776929 2.1581587225557213 6 0.60222085178504 1.670019750885057 7 0.4143704777349523 1.3406067889238942 8 0.28947008233794014 1.0703066897839413 9 0.23152034416931466 0.9630442378782134 >10 1.4781588553502354 13.177803886555568 >50 0.14830792833796935 4.7337872866222614 >100 0.09994482804700493 8.754832592658165 >500 0.008133401420572384 2.546557736315825 >1k 0.004174666215857912 3.624461900542223 >5k 4.318620223301289E-4 1.3831584266534305 >10k+ 2.8790801488675255E-4 3.1265607948680234 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 30031 0.9966765280039189 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29590 0.9820405069307037 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 22190 0.736447409557023 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12174 0.4040338334361063 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7898 0.26212084906180116 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7455 0.24741845147578218 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7368 0.24453107316882136 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6710 0.2226932004564049 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6563 0.21781452676533317 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5584 0.18532322374792326 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4332 0.14377152673280866 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3712 0.12319480776366244 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 3686 0.12233191309721438 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3523 0.11692222730371304 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3406 0.11303920130469675 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3360 0.1115125415102117 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3194 0.1060032909475048 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3099 0.10285040658932919 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3028 0.10049404038479791 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3027 0.10046085212839607 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.318825640184872E-5 2 0.0 0.0 0.0 0.0 3.318825640184872E-5 3 0.0 0.0 0.0 0.0 3.318825640184872E-5 4 0.0 0.0 0.0 0.0 3.318825640184872E-5 5 0.0 0.0 0.0 0.0 3.318825640184872E-5 6 3.318825640184872E-5 0.0 0.0 0.0 3.318825640184872E-5 7 3.318825640184872E-5 0.0 0.0 0.0 3.318825640184872E-5 8 6.637651280369744E-5 0.0 0.0 0.0 3.318825640184872E-5 9 6.637651280369744E-5 0.0 0.0 9.956476920554615E-5 3.318825640184872E-5 10 6.637651280369744E-5 0.0 0.0 2.3231779481294103E-4 3.318825640184872E-5 11 9.956476920554615E-5 0.0 0.0 4.978238460277308E-4 3.318825640184872E-5 12 1.327530256073949E-4 0.0 0.0 9.624594356536128E-4 3.318825640184872E-5 13 1.327530256073949E-4 0.0 0.0 0.0010952124612610076 3.318825640184872E-5 14 1.327530256073949E-4 0.0 0.0 0.0015598480508868897 3.318825640184872E-5 15 1.327530256073949E-4 0.0 0.0 0.001891730614905377 3.318825640184872E-5 16 1.327530256073949E-4 0.0 0.0 0.0031196961017737794 3.318825640184872E-5 17 1.6594128200924358E-4 0.0 0.0 0.0043808498450440304 3.318825640184872E-5 18 1.6594128200924358E-4 0.0 0.0 0.005243744511492098 3.318825640184872E-5 19 2.655060512147898E-4 0.0 0.0 0.006504898254762349 3.318825640184872E-5 20 2.655060512147898E-4 0.0 0.0 0.010288359484573103 3.318825640184872E-5 21 2.9869430761663844E-4 0.0 0.0 0.01742383461097058 3.318825640184872E-5 22 2.9869430761663844E-4 3.318825640184872E-5 0.0 0.0284755239927862 3.318825640184872E-5 23 2.9869430761663844E-4 3.318825640184872E-5 0.0 0.0362415759908188 3.318825640184872E-5 24 3.3188256401848717E-4 3.318825640184872E-5 0.0 0.048222536551886186 3.318825640184872E-5 25 3.3188256401848717E-4 3.318825640184872E-5 0.0 0.05691785972917055 6.637651280369744E-5 26 3.650708204203359E-4 3.318825640184872E-5 0.0 0.0673721604957529 6.637651280369744E-5 27 3.650708204203359E-4 3.318825640184872E-5 0.0 0.11433354330436883 6.637651280369744E-5 28 3.982590768221846E-4 3.318825640184872E-5 0.0 0.22730636809626187 6.637651280369744E-5 29 3.982590768221846E-4 3.318825640184872E-5 0.0 0.3721399190339297 6.637651280369744E-5 30 3.982590768221846E-4 3.318825640184872E-5 0.0 0.5723978581626848 1.6594128200924358E-4 31 4.3144733322403333E-4 3.318825640184872E-5 0.0 0.8611025006023668 1.6594128200924358E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9610 0.0 24.467743 1 CCGTATA 140 0.0 21.142857 2 CGTATAC 145 7.2759576E-12 19.13793 3 GTATTGG 1595 0.0 18.78997 1 GAACCGT 115 6.41503E-8 17.695652 6 ATTGGAC 1845 0.0 17.447155 3 TTGGACC 2255 0.0 16.818182 4 GTATCAA 14515 0.0 16.173956 2 GTATTAG 765 0.0 15.477124 1 TGGACCC 2360 0.0 15.050847 5 CGAACTA 485 0.0 14.876288 24 GGACCCT 2355 0.0 14.847134 6 GTATACT 300 0.0 14.8 4 CTCTAAT 595 0.0 14.613445 1 TCTATAC 255 0.0 14.509804 3 ATTAGAG 625 0.0 14.504 3 TTAACGG 460 0.0 14.478261 35 ATACTGG 685 0.0 14.3138685 6 TATACTG 375 0.0 14.306667 5 TATTGGA 2135 0.0 14.037471 2 >>END_MODULE