##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088591_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 938038 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15886563230914 31.0 31.0 33.0 30.0 34.0 2 31.3638445350828 31.0 31.0 34.0 30.0 34.0 3 31.38367848637262 31.0 31.0 34.0 28.0 34.0 4 35.15557258874374 37.0 35.0 37.0 32.0 37.0 5 35.00783017319128 35.0 35.0 37.0 32.0 37.0 6 35.111004031819604 36.0 35.0 37.0 32.0 37.0 7 34.994394683371034 36.0 35.0 37.0 32.0 37.0 8 35.02796688407079 37.0 35.0 37.0 32.0 37.0 9 36.559355804349075 38.0 35.0 39.0 32.0 39.0 10 36.32446766548903 38.0 35.0 39.0 32.0 39.0 11 36.43302616738341 38.0 35.0 39.0 32.0 39.0 12 36.27771689419831 38.0 35.0 39.0 32.0 39.0 13 36.362245452742854 38.0 35.0 39.0 32.0 39.0 14 37.234038493110084 39.0 36.0 40.0 32.0 41.0 15 37.2155520352054 39.0 36.0 40.0 32.0 41.0 16 37.04671985569881 39.0 36.0 40.0 31.0 41.0 17 37.10568548395694 39.0 36.0 40.0 31.0 41.0 18 37.070124024826285 39.0 36.0 40.0 31.0 41.0 19 37.10132105522378 39.0 36.0 40.0 31.0 41.0 20 36.97351493223089 39.0 36.0 40.0 31.0 41.0 21 36.86434877904733 39.0 36.0 40.0 31.0 41.0 22 36.691054093757394 39.0 35.0 40.0 30.0 41.0 23 36.54421142853488 38.0 35.0 40.0 30.0 41.0 24 36.391850863184644 38.0 35.0 40.0 30.0 41.0 25 36.189988038864094 38.0 35.0 40.0 29.0 41.0 26 36.309315827290575 38.0 35.0 40.0 30.0 41.0 27 36.20467720923886 38.0 35.0 40.0 30.0 41.0 28 36.05421635370848 38.0 35.0 40.0 29.0 41.0 29 35.88929552960541 38.0 34.0 40.0 28.0 41.0 30 35.784713412463034 38.0 34.0 40.0 28.0 41.0 31 35.58642507019972 38.0 34.0 40.0 27.0 41.0 32 35.4588779985459 38.0 34.0 40.0 27.0 41.0 33 35.23410778667815 38.0 34.0 40.0 26.0 41.0 34 35.07313562989985 38.0 33.0 40.0 26.0 41.0 35 34.885858568629416 38.0 33.0 40.0 25.0 41.0 36 34.733414850997505 38.0 33.0 40.0 25.0 41.0 37 34.58122272232042 38.0 33.0 40.0 24.0 41.0 38 34.4738955138278 38.0 33.0 40.0 24.0 41.0 39 34.30227560077523 37.0 33.0 40.0 23.0 41.0 40 34.10398512640213 37.0 33.0 40.0 22.0 41.0 41 33.96706423407154 37.0 33.0 40.0 21.0 41.0 42 33.74076103526723 37.0 32.0 40.0 20.0 41.0 43 33.36265268571209 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 5.0 15 7.0 16 29.0 17 49.0 18 126.0 19 303.0 20 581.0 21 1181.0 22 2050.0 23 3459.0 24 5391.0 25 7829.0 26 11041.0 27 14963.0 28 19870.0 29 25368.0 30 31065.0 31 38125.0 32 45862.0 33 55707.0 34 66894.0 35 82227.0 36 107091.0 37 142845.0 38 176589.0 39 99379.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.32495272046548 23.602775154098236 15.291171573006638 21.781100552429645 2 21.092322485869442 24.62501519128223 32.66520119654001 21.617461126308317 3 21.98663593585761 25.171688140565735 31.822378197898164 21.01929772567849 4 16.445389205980995 18.451597909679567 34.17633400779073 30.926678876548714 5 13.130704726247764 39.321967766764246 34.139874930439916 13.40745257654807 6 32.19645685995663 37.54090985653033 13.659574558813182 16.603058724699853 7 25.7164421910413 33.3678379767131 21.522049213358095 19.39367061888751 8 27.051249522940434 35.43108061720314 18.787405201068612 18.73026465878781 9 24.9234039559165 14.461034627595042 21.432713813299674 39.18284760318878 10 17.097388378722396 27.920510682936083 33.0936486581567 21.88845228018481 11 33.74106379485692 22.72221381223362 22.703771062579552 20.8329513303299 12 20.36729855293709 27.79077180242165 30.860796684142862 20.981132960498403 13 31.79060976207787 21.01268818534004 26.167490016395924 21.029212036186166 14 20.45428863223025 23.14479797193717 27.923175820169334 28.477737575663248 15 23.753515316010652 29.56756549308237 24.91348964540882 21.765429545498158 16 21.9101998000081 28.167195785245376 27.107217404838607 22.815387009907916 17 22.006997584319613 27.401128738921027 27.311473522394614 23.28040015436475 18 22.72924977452939 25.73253961993011 29.127924455086042 22.410286150454457 19 23.164093565505876 25.284370142787395 30.33288630098141 21.21864999072532 20 23.681343399734338 24.825113694754368 30.257303009046545 21.23623989646475 21 23.01132789929619 25.310488487673204 30.76005449672615 20.918129116304456 22 21.721294872915596 25.886371341033094 30.300904654182453 22.09142913186886 23 22.16541334146378 26.128045985343878 30.946827314032056 20.75971335916029 24 22.190892053413613 26.045533336602567 29.39550423330398 22.368070376679835 25 22.36753734923319 26.322707608860195 29.920642873742853 21.389112168163763 26 22.155179214488115 26.628452152258227 29.98961662533927 21.226752007914392 27 21.729396890104667 26.60777068732823 29.71158950916701 21.951242913400097 28 21.623750850178777 26.647108112890947 29.853588020954376 21.8755530159759 29 21.789735597065363 26.256079178029033 29.570017419336956 22.384167805568644 30 21.804980182039532 26.696679665429336 30.546523701598442 20.951816450932693 31 22.118080504201323 26.221858815954153 30.39823546594061 21.261825213903915 32 22.00305318121441 26.23028064961121 29.723422718482624 22.04324345069176 33 21.749118905630688 26.44082649103768 29.934075165398415 21.875979437933218 34 21.245407968547116 26.492530153362658 30.56805801044307 21.69400386764715 35 21.022495890358385 27.88191949579868 29.758282713493482 21.337301900349452 36 22.455700088908976 26.154590752187012 29.856359763676956 21.53334939522706 37 21.706370104409416 26.555107575599283 29.739200330903437 21.99932198908786 38 21.721934505851575 25.48574791213149 30.777964218933562 22.014353363083373 39 21.19903458068863 25.490118737194017 31.20342672684902 22.107419955268337 40 20.645219063620026 26.04414746524128 30.87582805813837 22.434805413000326 41 21.484417475624653 25.170195663715116 30.807707150456594 22.537679710203637 42 20.620913012052817 26.641458021956467 30.276491997125916 22.4611369688648 43 20.70747666938866 26.532933633818672 29.72630106669453 23.03328863009814 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 114.0 1 148.5 2 183.0 3 349.0 4 515.0 5 515.0 6 958.0 7 1401.0 8 1606.5 9 1812.0 10 2741.0 11 3670.0 12 3670.0 13 7241.0 14 10812.0 15 16745.0 16 22678.0 17 20321.5 18 17965.0 19 17965.0 20 20765.0 21 23565.0 22 18892.5 23 14220.0 24 15527.0 25 16834.0 26 16834.0 27 18462.5 28 20091.0 29 21809.5 30 23528.0 31 25991.0 32 28454.0 33 28454.0 34 31211.0 35 33968.0 36 37877.5 37 41787.0 38 44176.0 39 46565.0 40 46565.0 41 48363.5 42 50162.0 43 53535.0 44 56908.0 45 60397.0 46 63886.0 47 63886.0 48 77294.5 49 90703.0 50 86761.0 51 82819.0 52 76873.5 53 70928.0 54 70928.0 55 63452.5 56 55977.0 57 49688.5 58 43400.0 59 38507.5 60 33615.0 61 33615.0 62 29677.5 63 25740.0 64 22169.5 65 18599.0 66 15632.5 67 12666.0 68 12666.0 69 10837.0 70 9008.0 71 7585.0 72 6162.0 73 5078.5 74 3995.0 75 3995.0 76 3173.5 77 2352.0 78 1840.5 79 1329.0 80 1050.5 81 772.0 82 772.0 83 579.0 84 386.0 85 298.0 86 210.0 87 170.5 88 131.0 89 131.0 90 104.5 91 78.0 92 56.5 93 35.0 94 22.5 95 10.0 96 10.0 97 6.5 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 938038.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.749259781704524 #Duplication Level Percentage of deduplicated Percentage of total 1 85.78560697412057 52.971977305761754 2 8.224065798638689 10.156599509239435 3 2.2954240559040953 4.252222090115875 4 1.0541539390666572 2.6037290173333663 5 0.5629127570169167 1.7379723033736552 6 0.3899671882148864 1.4448111126853131 7 0.26839946105037543 1.1601427631968384 8 0.20930774629078697 1.0339678720026324 9 0.14931966505873476 0.8298340909406031 >10 0.9527981034772388 10.98949418622249 >50 0.07064723661381339 3.0164121430426882 >100 0.03254930575490167 3.8430698864207864 >500 0.0027701535956423957 1.1430745965388331 >1k 0.0015582113975488475 1.7987495404756704 >5k 1.7313459972764973E-4 0.6884961094004943 >10k+ 3.4626919945529946E-4 2.3294474732495916 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10917 1.1638121270140442 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10872 1.1590148799942006 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6440 0.6865393512842763 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4228 0.4507280088866336 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1869 0.19924565955750195 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1845 0.19668712781358536 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1803 0.1922096972617314 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1666 0.17760474522354106 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1644 0.1752594244582842 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1277 0.13613520987422684 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1276 0.13602860438489697 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1217 0.12973888051443544 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 943 0.10052897643805475 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.0660548932985657E-4 0.0 5 0.0 0.0 0.0 1.0660548932985657E-4 0.0 6 0.0 0.0 0.0 1.0660548932985657E-4 0.0 7 0.0 0.0 0.0 1.0660548932985657E-4 0.0 8 0.0 0.0 0.0 1.0660548932985657E-4 0.0 9 0.0 0.0 0.0 2.1321097865971314E-4 0.0 10 0.0 0.0 0.0 2.1321097865971314E-4 0.0 11 0.0 0.0 0.0 6.396329359791395E-4 0.0 12 0.0 0.0 0.0 0.001279265871958279 0.0 13 0.0 0.0 0.0 0.0013858713612881354 0.0 14 0.0 0.0 0.0 0.001492476850617992 0.0 15 0.0 0.0 0.0 0.0019188988079374184 0.0 16 0.0 0.0 0.0 0.0026651372332464145 0.0 17 0.0 0.0 0.0 0.003837797615874837 0.0 18 0.0 0.0 0.0 0.0042642195731942625 0.0 19 0.0 0.0 0.0 0.005436879955822685 0.0 20 0.0 0.0 0.0 0.00874165012504824 0.0 21 0.0 0.0 0.0 0.014071924591541067 0.0 22 0.0 0.0 0.0 0.023239996673908733 0.0 23 0.0 0.0 1.0660548932985657E-4 0.02952972054437027 0.0 24 0.0 0.0 1.0660548932985657E-4 0.040190269477355926 0.0 25 0.0 0.0 1.0660548932985657E-4 0.04477430551853976 0.0 26 0.0 0.0 1.0660548932985657E-4 0.05276971721827901 0.0 27 0.0 0.0 1.0660548932985657E-4 0.09519870197156192 0.0 28 0.0 0.0 1.0660548932985657E-4 0.1939153850910091 0.0 29 0.0 0.0 1.0660548932985657E-4 0.33132986083719423 0.0 30 0.0 0.0 1.0660548932985657E-4 0.5050968084448605 0.0 31 0.0 0.0 1.0660548932985657E-4 0.7816314477665084 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3295 0.0 25.827011 1 TACACAG 115 6.4012056E-8 17.69565 5 GTATCAA 4870 0.0 17.398357 2 TCGGGTA 65 0.0015796409 17.076923 33 GCGATAC 65 0.0015796409 17.076923 13 TGACTAA 65 0.0015796409 17.076923 12 CGCGATA 70 0.0025920176 15.857142 12 TATACTT 155 7.201379E-9 15.5161295 5 TAGTTCG 85 5.362845E-4 15.235294 9 CGGGTAA 75 0.0041036573 14.8 34 ACGGGTA 150 8.094321E-8 14.8 5 TCGCGAT 75 0.0041036573 14.8 11 GTCGGGT 75 0.0041036573 14.8 32 CTAAAGA 130 4.4415738E-6 14.230769 2 GACTGAG 145 8.904153E-7 14.034483 7 TAAACGT 80 0.0062974812 13.875001 4 CTCGCGA 80 0.0062974812 13.875001 10 CCGAAAT 80 0.0062974812 13.875001 24 TATACAG 160 1.781791E-7 13.875001 5 ACTGTTC 120 3.2990873E-5 13.874999 8 >>END_MODULE