##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088589_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3405679 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.57833724200079 31.0 31.0 34.0 30.0 34.0 2 31.765818211287677 31.0 31.0 34.0 30.0 34.0 3 31.828238656667292 31.0 31.0 34.0 30.0 34.0 4 35.545785142992045 37.0 35.0 37.0 33.0 37.0 5 35.446800476498225 37.0 35.0 37.0 33.0 37.0 6 35.4838115982158 37.0 35.0 37.0 33.0 37.0 7 35.35371566139968 37.0 35.0 37.0 33.0 37.0 8 35.37986874276759 37.0 35.0 37.0 33.0 37.0 9 36.96143617763154 39.0 37.0 39.0 33.0 39.0 10 36.81435596249676 39.0 37.0 39.0 32.0 39.0 11 36.863677111084165 39.0 37.0 39.0 32.0 39.0 12 36.75945912694649 39.0 37.0 39.0 32.0 39.0 13 36.81015327633638 39.0 37.0 39.0 32.0 39.0 14 37.81705087296836 40.0 37.0 41.0 32.0 41.0 15 37.777127556648765 40.0 37.0 41.0 32.0 41.0 16 37.66335112616309 39.0 37.0 41.0 32.0 41.0 17 37.7044789012705 39.0 37.0 41.0 32.0 41.0 18 37.6804924950355 39.0 37.0 41.0 32.0 41.0 19 37.71225972852991 40.0 37.0 41.0 32.0 41.0 20 37.592035244660465 39.0 37.0 41.0 32.0 41.0 21 37.497598276290866 39.0 36.0 41.0 32.0 41.0 22 37.34330892606144 39.0 36.0 41.0 31.0 41.0 23 37.212337686552374 39.0 36.0 41.0 31.0 41.0 24 37.071214580117505 39.0 36.0 41.0 31.0 41.0 25 36.87707943115014 39.0 36.0 40.0 30.0 41.0 26 37.01729611040852 39.0 36.0 40.0 31.0 41.0 27 36.93864042970579 39.0 36.0 41.0 31.0 41.0 28 36.81169746179837 39.0 35.0 41.0 30.0 41.0 29 36.664623119207654 39.0 35.0 40.0 30.0 41.0 30 36.55509811699811 39.0 35.0 40.0 30.0 41.0 31 36.36860667138623 38.0 35.0 40.0 30.0 41.0 32 36.24893420665894 38.0 35.0 40.0 30.0 41.0 33 36.04781748367947 38.0 35.0 40.0 29.0 41.0 34 35.91223189267104 38.0 35.0 40.0 29.0 41.0 35 35.73052510233642 38.0 35.0 40.0 27.0 41.0 36 35.589668315774915 38.0 35.0 40.0 27.0 41.0 37 35.426802702192425 38.0 34.0 40.0 26.0 41.0 38 35.34088385898965 38.0 34.0 40.0 26.0 41.0 39 35.201793533683 38.0 34.0 40.0 25.0 41.0 40 35.01529327925503 38.0 34.0 40.0 24.0 41.0 41 34.88798004744428 38.0 34.0 40.0 24.0 41.0 42 34.67107880689871 38.0 33.0 40.0 23.0 41.0 43 34.30696081456884 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 2.0 14 9.0 15 16.0 16 51.0 17 118.0 18 283.0 19 582.0 20 1369.0 21 2680.0 22 4944.0 23 8144.0 24 13399.0 25 20720.0 26 29890.0 27 42021.0 28 56766.0 29 73938.0 30 93098.0 31 115040.0 32 140618.0 33 172629.0 34 213379.0 35 263003.0 36 340841.0 37 478528.0 38 658087.0 39 675522.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.07001863651859 21.530890022224643 14.130221902886325 23.26886943837044 2 19.431837234219667 23.03928232813486 34.716131496832205 22.81274894081327 3 20.20554491483196 24.468953180848814 32.28454590112574 23.04095600319349 4 14.335496680691282 16.543162171185248 35.60450060032082 33.51684054780266 5 13.11568119015327 38.17467823596998 34.690439116546216 14.019201457330535 6 32.74850624501017 36.758719773648664 13.617431355098352 16.875342626242816 7 26.149792743238574 32.69465501593075 21.5512971128518 19.604255127978885 8 26.738045482266532 34.82078023207707 18.89388283511159 19.547291450544808 9 24.529998276408314 14.441202473867913 21.718840795036762 39.30995845468701 10 16.908170147568224 27.162131251947113 33.33954844246918 22.59015015801548 11 33.42293856819742 22.262315385566282 23.219980509026247 21.09476553721005 12 20.90593388278813 27.023950290088994 30.853671176878382 21.21644465024449 13 31.472960311291814 20.77485869924911 26.187435750697585 21.564745238761493 14 20.615184226111737 22.83042529845003 27.511753162878826 29.042637312559407 15 23.273303209139794 29.05253254930955 25.322997264275347 22.351166977275312 16 22.138463431227663 27.941917015667066 26.666870248194268 23.252749304911003 17 22.014875741371984 26.561722346703842 26.993912227194635 24.429489684729536 18 22.985431099055432 25.284884453291106 29.301264153198233 22.428420294455233 19 23.061245642939337 24.74440486023492 30.252293301864324 21.942056194961417 20 23.861115507362847 24.282881622137612 30.1841130652654 21.67188980523414 21 22.847749303442868 25.13833511613984 30.561101031541725 21.45281454887557 22 21.622560435085045 25.55701814528028 30.18226321388481 22.638158205749868 23 22.397883065315316 25.690207444682837 31.10378282862243 20.80812666137942 24 22.53183579544637 25.732812751877088 28.851280464189372 22.88407098848717 25 22.520296246357923 25.829709728955663 29.717069635746647 21.932924388939767 26 22.15793091480436 26.47260649051188 29.783811099049558 21.585651495634202 27 21.349399047884432 26.5255768379815 29.438769772488833 22.686254341645235 28 21.607145006913452 26.24381217372512 29.659430615745052 22.48961220361637 29 22.001926781707848 26.116789045591204 29.192798264310877 22.688485908390074 30 21.952098245313195 26.21101401512004 30.559456719203425 21.27743102036334 31 22.385903075421965 25.940407184587862 30.446468971385737 21.22722076860444 32 22.073425005703708 25.74678940675266 29.534609691635648 22.645175895907983 33 21.723480104848402 25.903145892493097 30.083105307341064 22.29026869531744 34 21.212744947483305 26.199680005073876 30.5494733942923 22.038101653150516 35 20.889373308523794 27.847545232536596 29.60516830858105 21.657913150358564 36 22.693771198048907 25.831530217615928 29.488715759764794 21.98598282457037 37 21.7537824322257 26.296782521194746 29.595331797271555 22.354103249307993 38 21.66722113270217 25.113817244666926 30.77442119471624 22.44454042791467 39 21.138721529539335 25.038355053426937 31.421252560796248 22.40167085623748 40 20.311074531686632 25.71704497106157 30.962254516647047 23.00962598060475 41 21.31871500514288 24.698863281007988 31.1443327453938 22.838088968455335 42 20.24759233034 26.528248845531245 30.52797988301305 22.696178941115708 43 20.612776483044936 26.273615334856864 29.77485546934987 23.338752712748324 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 266.0 1 472.0 2 678.0 3 1575.0 4 2472.0 5 2472.0 6 3988.5 7 5505.0 8 6143.0 9 6781.0 10 10181.5 11 13582.0 12 13582.0 13 25535.0 14 37488.0 15 57847.0 16 78206.0 17 71577.5 18 64949.0 19 64949.0 20 71597.0 21 78245.0 22 62090.5 23 45936.0 24 51199.5 25 56463.0 26 56463.0 27 61884.5 28 67306.0 29 72910.0 30 78514.0 31 87142.5 32 95771.0 33 95771.0 34 106574.0 35 117377.0 36 130067.5 37 142758.0 38 153882.0 39 165006.0 40 165006.0 41 172415.0 42 179824.0 43 194018.0 44 208212.0 45 219554.5 46 230897.0 47 230897.0 48 289766.0 49 348635.0 50 331805.0 51 314975.0 52 291006.0 53 267037.0 54 267037.0 55 238944.5 56 210852.0 57 183133.0 58 155414.0 59 139279.5 60 123145.0 61 123145.0 62 108830.0 63 94515.0 64 82055.5 65 69596.0 66 59391.5 67 49187.0 68 49187.0 69 42342.5 70 35498.0 71 30288.0 72 25078.0 73 20389.0 74 15700.0 75 15700.0 76 12437.5 77 9175.0 78 7088.0 79 5001.0 80 3873.0 81 2745.0 82 2745.0 83 2080.0 84 1415.0 85 1074.5 86 734.0 87 557.5 88 381.0 89 381.0 90 303.0 91 225.0 92 148.0 93 71.0 94 63.0 95 55.0 96 55.0 97 30.5 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3405679.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.226447763954184 #Duplication Level Percentage of deduplicated Percentage of total 1 78.03866876978172 36.074504454548375 2 12.035020528128232 11.12672495563272 3 4.022517612739239 5.578401009146284 4 1.7887923822755538 3.307580704792802 5 0.9595208736159538 2.217762077131579 6 0.602801776235471 1.6719230892700683 7 0.4099559102813876 1.32655638305028 8 0.2928694152343275 1.0830650179991559 9 0.21863216313578537 0.9095929441845023 >10 1.3736215447215225 12.190649783095646 >50 0.14658805698508462 4.700797450492039 >100 0.09788681849087338 8.720720408255945 >500 0.008091101182834789 2.562115534530702 >1k 0.004395952610784918 3.832674155744046 >5k 3.822567487639059E-4 1.3137626800081923 >10k+ 2.548378325092706E-4 3.383169352117759 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37589 1.1037152943656756 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 36427 1.069595813345885 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26116 0.7668368040558139 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14744 0.43292394849896304 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8188 0.24042195403618485 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7864 0.23090843265028793 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7551 0.22171790118798632 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7535 0.2212480976627568 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7270 0.2134669767761436 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6201 0.18207822874674917 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4149 0.12182592663606875 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4032 0.11839048835782821 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4011 0.11777387123096451 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3800 0.11157833724200078 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3700 0.10864206520931656 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3557 0.10444319620257811 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3551 0.10426701988061704 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 2.9362720326842314E-5 0.0 7 0.0 0.0 2.9362720326842314E-5 2.9362720326842314E-5 0.0 8 2.9362720326842314E-5 0.0 2.9362720326842314E-5 2.9362720326842314E-5 0.0 9 8.808816098052694E-5 0.0 2.9362720326842314E-5 1.7617632196105388E-4 0.0 10 1.1745088130736925E-4 0.0 2.9362720326842314E-5 3.2298992359526546E-4 0.0 11 1.4681360163421156E-4 0.0 2.9362720326842314E-5 5.578916862100039E-4 0.0 12 1.4681360163421156E-4 0.0 2.9362720326842314E-5 8.808816098052693E-4 0.0 13 1.4681360163421156E-4 0.0 2.9362720326842314E-5 9.102443301321117E-4 0.0 14 1.4681360163421156E-4 0.0 2.9362720326842314E-5 0.0011745088130736925 0.0 15 1.4681360163421156E-4 0.0 2.9362720326842314E-5 0.0015855868976494848 0.0 16 1.4681360163421156E-4 0.0 2.9362720326842314E-5 0.0022315667448400156 0.0 17 1.4681360163421156E-4 0.0 2.9362720326842314E-5 0.0031418110749721275 0.0 18 1.7617632196105388E-4 0.0 2.9362720326842314E-5 0.0036409773205284468 0.0 19 1.7617632196105388E-4 0.0 2.9362720326842314E-5 0.004844848853928982 0.0 20 1.7617632196105388E-4 0.0 2.9362720326842314E-5 0.007957297208574266 0.0 21 1.7617632196105388E-4 0.0 2.9362720326842314E-5 0.012743420621849563 0.0 22 2.055390422878962E-4 0.0 2.9362720326842314E-5 0.021816501202843838 0.0 23 2.055390422878962E-4 0.0 2.9362720326842314E-5 0.027072428141348612 0.0 24 2.055390422878962E-4 0.0 2.9362720326842314E-5 0.03517653895155709 0.0 25 2.055390422878962E-4 0.0 2.9362720326842314E-5 0.040872906694964496 0.0 26 2.055390422878962E-4 0.0 2.9362720326842314E-5 0.05167838777524247 0.0 27 2.055390422878962E-4 0.0 2.9362720326842314E-5 0.10438447076192442 0.0 28 2.055390422878962E-4 0.0 2.9362720326842314E-5 0.2226868709587721 0.0 29 2.349017626147385E-4 0.0 2.9362720326842314E-5 0.3738167924810295 0.0 30 2.642644829415808E-4 0.0 2.9362720326842314E-5 0.5914532755435847 0.0 31 2.642644829415808E-4 0.0 2.9362720326842314E-5 0.9003784561022927 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11665 0.0 24.582083 1 GTATTGG 1530 0.0 18.137255 1 GTATCAA 17240 0.0 16.589909 2 ACGTTTA 125 1.6604099E-7 16.279999 26 TTAACGG 405 0.0 15.987655 35 ATTGGAC 1780 0.0 15.901687 3 TGGACCC 2240 0.0 15.11384 5 TTGGACC 2365 0.0 15.097252 4 AGTACCG 285 0.0 14.929824 5 CGCCTAA 75 0.0041066064 14.8 1 AGTTCCG 425 0.0 14.799999 32 CTAATAC 970 0.0 14.685567 3 GGACCCT 2320 0.0 14.512931 6 ACCGTTA 520 0.0 13.875 8 GTATTAG 785 0.0 13.66879 1 TAATACT 910 0.0 13.417582 4 CGAACTA 580 0.0 13.396551 24 CGCTACC 500 0.0 13.32 28 TTCGCTA 490 0.0 13.214285 26 TCGCTAC 520 0.0 13.163462 27 >>END_MODULE