##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088587_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1045162 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32888968408725 31.0 31.0 33.0 30.0 34.0 2 31.517627889265015 31.0 31.0 34.0 30.0 34.0 3 31.551018885110633 31.0 31.0 34.0 30.0 34.0 4 35.31135173303277 37.0 35.0 37.0 33.0 37.0 5 35.20996170928526 37.0 35.0 37.0 33.0 37.0 6 35.27610169523959 37.0 35.0 37.0 32.0 37.0 7 35.130731886540076 37.0 35.0 37.0 32.0 37.0 8 35.176897935439676 37.0 35.0 37.0 32.0 37.0 9 36.70516053970581 39.0 35.0 39.0 32.0 39.0 10 36.53497448242474 38.0 35.0 39.0 32.0 39.0 11 36.608022488379795 38.0 35.0 39.0 32.0 39.0 12 36.47674523183966 38.0 35.0 39.0 32.0 39.0 13 36.54977984274208 38.0 35.0 39.0 32.0 39.0 14 37.43705760446706 39.0 36.0 41.0 32.0 41.0 15 37.411779226569664 39.0 36.0 41.0 32.0 41.0 16 37.266727071975446 39.0 36.0 40.0 32.0 41.0 17 37.34980031803682 39.0 36.0 40.0 32.0 41.0 18 37.338428875140885 39.0 36.0 40.0 32.0 41.0 19 37.37340431435509 39.0 36.0 40.0 32.0 41.0 20 37.25809970129033 39.0 36.0 40.0 31.0 41.0 21 37.16500599907 39.0 36.0 40.0 31.0 41.0 22 36.99772953857871 39.0 36.0 40.0 31.0 41.0 23 36.856595436879644 39.0 35.0 40.0 31.0 41.0 24 36.702793442547666 39.0 35.0 40.0 30.0 41.0 25 36.49623790378908 38.0 35.0 40.0 30.0 41.0 26 36.60116230785275 38.0 35.0 40.0 30.0 41.0 27 36.50453900926364 38.0 35.0 40.0 30.0 41.0 28 36.357332164774455 38.0 35.0 40.0 30.0 41.0 29 36.187325983914455 38.0 35.0 40.0 30.0 41.0 30 36.04864891758407 38.0 35.0 40.0 29.0 41.0 31 35.813037596085586 38.0 35.0 40.0 29.0 41.0 32 35.67560148570269 38.0 34.0 40.0 28.0 41.0 33 35.44890552852094 38.0 34.0 40.0 27.0 41.0 34 35.27178848829177 38.0 34.0 40.0 27.0 41.0 35 35.068764459480924 38.0 34.0 40.0 25.0 41.0 36 34.90510849035843 38.0 33.0 40.0 25.0 41.0 37 34.714979113285786 38.0 33.0 40.0 24.0 41.0 38 34.59414042990465 38.0 33.0 40.0 24.0 41.0 39 34.3969049774102 38.0 33.0 40.0 23.0 41.0 40 34.163333531069824 38.0 33.0 40.0 22.0 41.0 41 33.99521413905213 37.0 33.0 40.0 21.0 41.0 42 33.71476670602261 37.0 33.0 40.0 19.0 41.0 43 33.329906751297884 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 7.0 15 6.0 16 27.0 17 48.0 18 116.0 19 280.0 20 533.0 21 1119.0 22 1904.0 23 3314.0 24 5454.0 25 7981.0 26 11373.0 27 15602.0 28 21063.0 29 26777.0 30 33086.0 31 40441.0 32 48853.0 33 59401.0 34 72014.0 35 87866.0 36 113457.0 37 155155.0 38 196924.0 39 142358.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.3856052937248 22.546361233952247 15.046853980531246 22.021179491791703 2 20.030578991582164 24.057610207795538 33.97281952462872 21.938991275993576 3 21.195278818020554 24.77807268155559 32.772718487660285 21.253930012763572 4 15.102826164747665 17.16078464391166 34.61693019838073 33.11945899295994 5 12.943735038204604 38.78747983566184 34.31334089834877 13.955444227784783 6 32.5875797244829 36.49539497226267 12.989756611893657 17.927268691360766 7 25.37137783424962 33.524946371949994 21.182075123282324 19.921600670518064 8 27.039540281793634 34.994575003683636 18.4378115545724 19.528073159950324 9 24.09884783411567 14.607687612063966 22.213972570759367 39.079491983061 10 17.32726601235024 27.64078678712008 32.77558885608164 22.25635834444804 11 32.92570912451849 22.28869782866197 23.224437934023626 21.56115511279591 12 20.85179139693177 27.68977440817787 30.808238340085076 20.650195854805283 13 32.40502429288474 20.537773091635554 26.5837257764825 20.47347683899721 14 20.138026449488216 23.65700245512179 28.05057971874217 28.15439137664783 15 23.030975102424314 29.387693008356596 25.803655318505648 21.77767657071344 16 21.378025607513475 28.138987066119892 27.581465839745416 22.901521486621213 17 21.60755940227448 26.719876918602093 27.480620229208487 24.19194344991494 18 22.93979306557261 24.84944917629994 29.954208055784655 22.256549702342795 19 22.72346296554984 24.42807909204506 31.568503255954578 21.279954686450523 20 23.653462334068788 23.94824917094192 31.36604660330169 21.032241891687605 21 22.730351849761092 24.776350460502776 31.881851808619142 20.611445881116992 22 20.922115423254958 25.388025971093477 31.353512661195104 22.336345944456458 23 22.00280913389503 25.62597951322379 32.527684703423965 19.843526649457214 24 22.043281328636137 25.58694250269336 29.95057225578427 22.419203912886232 25 21.952577686521323 25.90698858167442 30.705383471653196 21.43505026015106 26 21.603636565431962 26.69203434491495 31.003614750631957 20.70071433902113 27 20.69679150217861 26.609176376485177 30.678019292702952 22.016012828633265 28 21.154902302226834 26.48249745015605 30.63544216111952 21.727158086497596 29 21.35955957066943 26.145229160646867 29.979467297892576 22.51574397079113 30 21.324062681192007 26.399161086989388 31.875728355986922 20.40104787583169 31 22.0060622181059 25.86001021851158 31.646290240173293 20.487637323209228 32 21.63616740754065 25.73744548691973 30.500726203210604 22.125660902329017 33 21.186954749598627 26.104182892221495 31.002466603263418 21.706395754916464 34 20.53806012847769 26.677012750176527 31.46995394015473 21.31497318119105 35 20.07353883895511 28.729421850392573 30.47431881373414 20.722720496918182 36 22.27463302339733 26.15192668696336 30.449346608468353 21.124093681170958 37 21.24015224434107 27.002416850210782 30.188812834756718 21.568618070691432 38 21.283016412766635 25.41271113951713 31.634904445435254 21.669368002280986 39 20.61355081795932 25.222405713181306 32.39048109288321 21.773562375976162 40 19.533718217845657 26.157284708016554 31.770481513870575 22.53851556026721 41 21.05233447063709 25.077165071060755 31.7272346296555 22.143265828646662 42 19.807168649453384 27.104984681800527 30.93319504536139 22.154651623384698 43 20.167495565280788 27.095990860746948 29.97975433473471 22.756759239237553 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 58.0 1 131.0 2 204.0 3 431.5 4 659.0 5 659.0 6 1245.0 7 1831.0 8 2093.0 9 2355.0 10 3723.5 11 5092.0 12 5092.0 13 9954.5 14 14817.0 15 23047.5 16 31278.0 17 28000.5 18 24723.0 19 24723.0 20 27586.0 21 30449.0 22 23282.0 23 16115.0 24 17247.5 25 18380.0 26 18380.0 27 19872.5 28 21365.0 29 22894.0 30 24423.0 31 26169.0 32 27915.0 33 27915.0 34 30916.5 35 33918.0 36 37250.5 37 40583.0 38 43324.5 39 46066.0 40 46066.0 41 48287.0 42 50508.0 43 54352.0 44 58196.0 45 63644.0 46 69092.0 47 69092.0 48 92722.0 49 116352.0 50 108836.0 51 101320.0 52 92750.0 53 84180.0 54 84180.0 55 73959.0 56 63738.0 57 54253.0 58 44768.0 59 38895.0 60 33022.0 61 33022.0 62 29237.0 63 25452.0 64 22089.0 65 18726.0 66 15933.5 67 13141.0 68 13141.0 69 11456.5 70 9772.0 71 8143.0 72 6514.0 73 5394.5 74 4275.0 75 4275.0 76 3463.0 77 2651.0 78 2109.5 79 1568.0 80 1192.5 81 817.0 82 817.0 83 606.5 84 396.0 85 301.5 86 207.0 87 159.0 88 111.0 89 111.0 90 89.5 91 68.0 92 51.5 93 35.0 94 24.5 95 14.0 96 14.0 97 10.0 98 6.0 99 4.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1045162.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.37610263996741 #Duplication Level Percentage of deduplicated Percentage of total 1 84.65973884438954 46.03466648875361 2 8.762705358838682 9.529635319920091 3 2.4354727751097593 3.972945527886435 4 1.0985814646162813 2.389463139133625 5 0.6353412481193266 1.7273690459570747 6 0.41586723376408 1.356794363265296 7 0.299101564504527 1.1384784159891095 8 0.21194061704249892 0.9219603796704756 9 0.17104794478282045 0.837082854167951 >10 1.124513345058569 11.705718928961744 >50 0.11473697154771349 4.344904571797283 >100 0.060539186514402946 5.887867381196156 >500 0.006177467795152537 2.2565247192159537 >1k 0.0035299815972300213 3.5148309285405697 >5k 3.529981597230021E-4 1.4939207119477513 >10k+ 3.529981597230021E-4 2.887837223596803 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 15112 1.445900252783779 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14978 1.433079273835061 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9735 0.9314345527296246 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5831 0.55790394216399 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3232 0.3092343579272878 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3118 0.29832695792613967 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3099 0.29650905792594834 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3065 0.29325597371507955 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2832 0.27096277897589083 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2357 0.22551527897110685 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1789 0.1711696368601231 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1690 0.16169742106965235 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1565 0.1497375526473408 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1410 0.13490731580367446 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1375 0.1315585526454272 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1359 0.13002768948737134 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1331 0.12734867896077354 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1314 0.12572213685533917 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1272 0.12170362106544248 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1269 0.121416584223307 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1215 0.11624992106486841 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1157 0.11070054211691585 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1143 0.10936103685361695 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 9.567894737849252E-5 0.0 0.0 0.0 0.0 7 1.9135789475698505E-4 0.0 0.0 0.0 0.0 8 1.9135789475698505E-4 0.0 0.0 0.0 0.0 9 2.8703684213547757E-4 0.0 0.0 1.9135789475698505E-4 0.0 10 3.827157895139701E-4 0.0 0.0 4.783947368924626E-4 0.0 11 5.740736842709551E-4 0.0 0.0 0.0010524684211634177 0.0 12 5.740736842709551E-4 0.0 0.0 0.002009257894948343 0.0 13 5.740736842709551E-4 0.0 0.0 0.002200615789705328 0.0 14 5.740736842709551E-4 0.0 0.0 0.002774689473976283 0.0 15 6.697526316494476E-4 0.0 0.0 0.0034444421056257306 0.0 16 6.697526316494476E-4 0.0 0.0 0.004209873684653671 0.0 17 6.697526316494476E-4 0.0 0.0 0.0054537000005740735 0.0 18 6.697526316494476E-4 0.0 0.0 0.006027773684845029 0.0 19 6.697526316494476E-4 0.0 0.0 0.007462957895522417 0.0 20 7.654315790279402E-4 0.0 0.0 0.01176851052755458 0.0 21 7.654315790279402E-4 0.0 0.0 0.01894443158094152 0.0 22 8.611105264064327E-4 0.0 0.0 0.031956768424416505 0.0 23 8.611105264064327E-4 0.0 0.0 0.03951540526731741 0.0 24 8.611105264064327E-4 0.0 0.0 0.053771568426712796 0.0 25 8.611105264064327E-4 0.0 0.0 0.061425884216992195 0.0 26 8.611105264064327E-4 0.0 0.0 0.07348143158668226 0.0 27 8.611105264064327E-4 0.0 0.0 0.12399991580252631 0.0 28 8.611105264064327E-4 0.0 0.0 0.24599057371010427 0.0 29 8.611105264064327E-4 0.0 0.0 0.40510466320053734 0.0 30 8.611105264064327E-4 0.0 0.0 0.626697105329126 0.0 31 9.567894737849252E-4 0.0 0.0 0.9397586211515535 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATTACG 25 0.005496118 29.6 16 GGTATCA 4835 0.0 21.886246 1 TATACCG 45 0.0038255802 20.555555 5 CTGTGCG 105 2.258821E-8 19.38095 9 GTATTAG 185 0.0 19.0 1 TGTGCGC 130 6.9667294E-10 18.5 10 AGTTCCG 75 2.06704E-4 17.266666 32 TAGGTCG 65 0.0015798047 17.076923 21 AATGCGA 65 0.0015798047 17.076923 20 TAAGCCG 65 0.0015798047 17.076923 10 GTATTGG 580 0.0 16.905174 1 TTAACGG 100 5.8767637E-6 16.650002 35 ATAGACT 80 3.382198E-4 16.1875 4 CCTATAG 80 3.382198E-4 16.1875 2 TAATACT 230 0.0 16.086956 4 ATTAGAG 150 4.667527E-9 16.033333 3 ATTGGAC 600 0.0 16.033333 3 GTGCGCC 185 1.8189894E-11 16.0 11 ATACACA 445 0.0 15.797753 37 TTGGACC 810 0.0 15.759259 4 >>END_MODULE