##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088586_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1145559 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.741046947385513 31.0 31.0 34.0 30.0 34.0 2 31.92790070175347 31.0 31.0 34.0 30.0 34.0 3 32.01336465428668 33.0 31.0 34.0 30.0 34.0 4 35.694094324255666 37.0 35.0 37.0 35.0 37.0 5 35.59464069506677 37.0 35.0 37.0 33.0 37.0 6 35.61873111729732 37.0 35.0 37.0 33.0 37.0 7 35.48973994355594 37.0 35.0 37.0 33.0 37.0 8 35.512578575175965 37.0 35.0 37.0 33.0 37.0 9 37.12845082619053 39.0 37.0 39.0 33.0 39.0 10 36.99853521293971 39.0 37.0 39.0 33.0 39.0 11 37.04552362645661 39.0 37.0 39.0 33.0 39.0 12 36.95166289994666 39.0 37.0 39.0 33.0 39.0 13 36.981418678566534 39.0 37.0 39.0 33.0 39.0 14 38.044935267410935 40.0 37.0 41.0 33.0 41.0 15 38.010602683929854 40.0 37.0 41.0 33.0 41.0 16 37.91550675259851 40.0 37.0 41.0 33.0 41.0 17 37.935806012610435 40.0 37.0 41.0 33.0 41.0 18 37.90538505655318 40.0 37.0 41.0 33.0 41.0 19 37.92974085140966 40.0 37.0 41.0 32.0 41.0 20 37.81739046177456 40.0 37.0 41.0 32.0 41.0 21 37.71992276259887 40.0 37.0 41.0 32.0 41.0 22 37.56489801049095 39.0 36.0 41.0 32.0 41.0 23 37.427322381474895 39.0 36.0 41.0 32.0 41.0 24 37.28878477668981 39.0 36.0 41.0 31.0 41.0 25 37.10327621711322 39.0 36.0 41.0 31.0 41.0 26 37.25832977611803 39.0 36.0 41.0 31.0 41.0 27 37.18465482790498 39.0 36.0 41.0 31.0 41.0 28 37.05886820320909 39.0 36.0 41.0 31.0 41.0 29 36.93358264393191 39.0 36.0 41.0 30.0 41.0 30 36.82029297487078 39.0 35.0 41.0 30.0 41.0 31 36.64240165718221 39.0 35.0 40.0 30.0 41.0 32 36.52418164407071 39.0 35.0 40.0 30.0 41.0 33 36.32660735937652 39.0 35.0 40.0 30.0 41.0 34 36.18431089101478 38.0 35.0 40.0 30.0 41.0 35 36.01720906561775 38.0 35.0 40.0 29.0 41.0 36 35.870025027082846 38.0 35.0 40.0 28.0 41.0 37 35.71996728234862 38.0 35.0 40.0 27.0 41.0 38 35.633239318097104 38.0 35.0 40.0 27.0 41.0 39 35.50914357095532 38.0 35.0 40.0 26.0 41.0 40 35.3376962688085 38.0 34.0 40.0 25.0 41.0 41 35.21958013511308 38.0 34.0 40.0 24.0 41.0 42 35.0184713314635 38.0 34.0 40.0 24.0 41.0 43 34.66811224912903 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 2.0 15 7.0 16 14.0 17 30.0 18 62.0 19 153.0 20 358.0 21 712.0 22 1360.0 23 2442.0 24 3797.0 25 5991.0 26 8762.0 27 12471.0 28 17189.0 29 22623.0 30 28644.0 31 35735.0 32 43834.0 33 54893.0 34 68144.0 35 84876.0 36 111040.0 37 157732.0 38 218867.0 39 265819.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.67345374616235 20.976571263461768 13.65612770708449 23.69384728329139 2 18.861184801481198 22.583559642061214 35.43073730816134 23.124518248296248 3 19.86811678839763 24.423098242866583 31.82228065075653 23.886504317979256 4 14.135718893570736 16.194626378911956 35.930056854339234 33.73959787317807 5 13.374780347411178 37.80337808877587 34.85311537860555 13.968726185207398 6 32.92113282685571 36.61653393670689 14.08124767035133 16.381085566086075 7 26.620191539676263 32.26145488796299 21.91916784731297 19.19918572504777 8 26.36939694943691 34.934822213434664 19.275742235886582 19.420038601241842 9 24.660624201808897 14.656338084725448 21.76928468983265 38.913753023633 10 16.73287888271141 27.060500594033133 33.74771618048481 22.458904342770648 11 33.20588463798024 22.549427833922127 23.265933923962013 20.978753604135623 12 20.915291137339935 26.846543914368443 30.989848624121496 21.248316324170123 13 30.872525989495088 21.00668756476096 26.1570115550574 21.963774890686555 14 20.754583570117298 22.83889350090218 27.443719616361967 28.962803312618558 15 23.251355888260665 29.13206565528271 25.12441524181644 22.49216321464019 16 22.200515206986285 28.085327774475168 26.463412185666563 23.250744832871987 17 21.8674900201561 26.88713545090214 27.040772234341485 24.204602294600278 18 22.824839226962556 25.770911843039073 29.059000889522057 22.34524804047631 19 22.98790372211296 25.26452151307789 29.868125517760326 21.87944924704882 20 23.68302287354907 25.039653130043938 29.712568274527985 21.56475572187901 21 22.731958807883313 25.691387348883822 29.96851318875763 21.60814065447524 22 21.76570565112753 26.05086250468112 29.65635117876949 22.52708066542186 23 22.452968376137765 26.153956278114006 30.357580884092393 21.035494461655837 24 22.502376568993828 26.25093949766009 28.496568051056297 22.75011588228978 25 22.564005869623475 26.298776405230985 29.206003357312895 21.931214367832645 26 22.16245518563426 26.89394435380456 29.25462590752637 21.688974553034807 27 21.50827674523966 26.939860801582462 29.034733261228794 22.517129191949085 28 21.75846028009033 26.61905672252586 29.28203610638998 22.340446890993828 29 22.052552509298952 26.579425415888664 28.88729432530319 22.480727749509192 30 21.912097063529686 26.729395866995937 29.99889137093768 21.359615698536697 31 22.342891112548546 26.474498476289742 29.866903406982964 21.315707004178748 32 21.867577313783052 26.371230115602952 29.219883043998607 22.54130952661539 33 21.66811137619276 26.361889697518855 29.68690394820345 22.283094978084936 34 21.222651997845592 26.515788361839064 30.074225770999135 22.187333869316202 35 21.08944192311352 27.933262276320992 29.21010615777974 21.767189642785752 36 22.458817049143693 26.280095569062787 29.17937880109187 22.081708580701648 37 21.786132359834806 26.59295592806656 29.236206952239037 22.3847047598596 38 21.594348261416478 25.635781308514012 30.336281239115575 22.43358919095394 39 21.01087765885476 25.621814328201342 30.936075749917723 22.431232263026175 40 20.405059887792774 26.041958554731792 30.635523792314494 22.91745776516094 41 21.217676261109204 25.34710128417655 30.621731399255737 22.813491055458517 42 20.202800554139944 26.793120214672488 30.190413588475145 22.813665642712422 43 20.49619443433293 26.468737096910765 29.69641895354146 23.338649515214843 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 82.0 1 159.0 2 236.0 3 623.0 4 1010.0 5 1010.0 6 1508.5 7 2007.0 8 2200.5 9 2394.0 10 3515.0 11 4636.0 12 4636.0 13 8573.5 14 12511.0 15 18293.0 16 24075.0 17 22181.0 18 20287.0 19 20287.0 20 22151.5 21 24016.0 22 19790.5 23 15565.0 24 17590.0 25 19615.0 26 19615.0 27 21635.0 28 23655.0 29 26332.5 30 29010.0 31 32434.0 32 35858.0 33 35858.0 34 39829.5 35 43801.0 36 47448.0 37 51095.0 38 54469.5 39 57844.0 40 57844.0 41 60092.0 42 62340.0 43 66127.5 44 69915.0 45 73263.5 46 76612.0 47 76612.0 48 93113.0 49 109614.0 50 104263.0 51 98912.0 52 91969.0 53 85026.0 54 85026.0 55 77782.0 56 70538.0 57 61877.5 58 53217.0 59 47906.0 60 42595.0 61 42595.0 62 38020.5 63 33446.0 64 28948.5 65 24451.0 66 20973.0 67 17495.0 68 17495.0 69 14982.0 70 12469.0 71 10400.5 72 8332.0 73 6894.0 74 5456.0 75 5456.0 76 4399.5 77 3343.0 78 2616.0 79 1889.0 80 1457.0 81 1025.0 82 1025.0 83 792.5 84 560.0 85 442.0 86 324.0 87 231.0 88 138.0 89 138.0 90 125.5 91 113.0 92 71.5 93 30.0 94 21.5 95 13.0 96 13.0 97 10.5 98 8.0 99 4.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1145559.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.84307047894904 #Duplication Level Percentage of deduplicated Percentage of total 1 86.01800640617154 53.19617632635556 2 8.278920339853517 10.239877081343316 3 2.189951093418107 4.062998994471224 4 0.981522575743096 2.428014793134395 5 0.5403593942470095 1.6708742051190009 6 0.3767750258528361 1.3980554687114872 7 0.2580864103009569 1.1172599243330723 8 0.20728413379973656 1.0255269836596006 9 0.14706568631884565 0.8185494243646243 >10 0.8826553246110141 10.173567858084098 >50 0.07186881929241516 3.098852671204671 >100 0.04269776135231023 5.056934254942243 >500 0.0024035145193331713 1.051676796408494 >1k 0.0019793648982743763 2.1520552868309166 >5k 1.4138320701959832E-4 0.6624129871625167 >10k+ 2.8276641403919664E-4 1.847166943874779 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10857 0.9477469078414992 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10269 0.8964182551924431 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7576 0.6613365178048446 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4537 0.3960511854911008 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2182 0.19047469401401412 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2112 0.18436414012722174 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2038 0.17790441173261262 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1998 0.17441266665444558 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1976 0.17249220686145367 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1680 0.1466532932830173 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1328 0.11592593659514701 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1249 0.10902974006576703 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1150 0.10038767099730349 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.7458725390835392E-4 2 0.0 0.0 0.0 0.0 1.7458725390835392E-4 3 0.0 0.0 0.0 0.0 1.7458725390835392E-4 4 0.0 0.0 0.0 0.0 1.7458725390835392E-4 5 0.0 0.0 0.0 0.0 1.7458725390835392E-4 6 0.0 0.0 0.0 0.0 1.7458725390835392E-4 7 0.0 0.0 0.0 0.0 1.7458725390835392E-4 8 0.0 0.0 0.0 8.729362695417696E-5 1.7458725390835392E-4 9 0.0 0.0 0.0 2.6188088086253085E-4 1.7458725390835392E-4 10 0.0 0.0 0.0 4.364681347708848E-4 1.7458725390835392E-4 11 0.0 0.0 0.0 9.602298964959465E-4 1.7458725390835392E-4 12 0.0 0.0 0.0 0.0016585789121293622 1.7458725390835392E-4 13 0.0 0.0 0.0 0.0017458725390835392 1.7458725390835392E-4 14 0.0 0.0 0.0 0.001920459792991893 1.7458725390835392E-4 15 0.0 0.0 0.0 0.0034917450781670784 1.7458725390835392E-4 16 0.0 0.0 0.0 0.005063030363342264 1.7458725390835392E-4 17 0.0 0.0 0.0 0.006634315648517449 1.7458725390835392E-4 18 0.0 0.0 0.0 0.007856426425875926 1.7458725390835392E-4 19 0.0 0.0 0.0 0.00942771171105111 1.7458725390835392E-4 20 0.0 0.0 0.0 0.013006750416172367 1.7458725390835392E-4 21 0.0 0.0 0.0 0.0189427170490564 2.6188088086253085E-4 22 0.0 0.0 0.0 0.02985442041832852 2.6188088086253085E-4 23 0.0 0.0 0.0 0.03753625959029609 2.6188088086253085E-4 24 0.0 0.0 0.0 0.04967007373692669 2.6188088086253085E-4 25 0.0 0.0 0.0 0.057439206535848435 2.6188088086253085E-4 26 8.729362695417696E-5 0.0 0.0 0.06808902902425802 2.6188088086253085E-4 27 8.729362695417696E-5 0.0 0.0 0.12186190322803103 2.6188088086253085E-4 28 8.729362695417696E-5 0.0 0.0 0.24110499764743676 2.6188088086253085E-4 29 8.729362695417696E-5 0.0 0.0 0.39142462326252947 2.6188088086253085E-4 30 8.729362695417696E-5 0.0 0.0 0.6155946572808559 2.6188088086253085E-4 31 8.729362695417696E-5 0.0 0.0 0.9475723205875909 2.6188088086253085E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTTA 50 2.7207716E-7 29.599998 26 GTCGATT 45 1.3232081E-4 24.666668 18 CGAGTAT 40 0.0019311828 23.125002 26 GGTATCA 3645 0.0 21.51989 1 CTATCGG 65 6.902103E-5 19.923077 12 CGTTTAT 85 1.2453002E-6 19.588236 27 ATCGGTC 70 1.2191924E-4 18.5 14 TAAATCG 50 0.00703487 18.499998 5 ACGAGTC 50 0.00703487 18.499998 26 TAATACT 255 0.0 17.411764 4 GTCTAGG 75 2.0672582E-4 17.266666 2 GCTCTAT 75 2.0672582E-4 17.266666 1 ATGCTAG 180 1.0913936E-11 16.444445 15 TAAGCCG 70 0.0025924859 15.857143 36 AGTACCG 95 7.059645E-5 15.578948 5 AATACTG 275 0.0 15.472728 5 ACCGTTA 120 1.9353884E-6 15.416666 8 CTAATAC 245 0.0 15.10204 3 ACTGTAC 135 3.9717997E-7 15.074075 3 CTAGGCT 150 8.099596E-8 14.8 4 >>END_MODULE