##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088584_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5118352 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.71232635035652 31.0 31.0 34.0 30.0 34.0 2 31.890835761198137 31.0 31.0 34.0 30.0 34.0 3 31.977234664595166 31.0 31.0 34.0 30.0 34.0 4 35.66001967039391 37.0 35.0 37.0 33.0 37.0 5 35.56337938461442 37.0 35.0 37.0 33.0 37.0 6 35.58855076790342 37.0 35.0 37.0 33.0 37.0 7 35.45847198473258 37.0 35.0 37.0 33.0 37.0 8 35.47674974288599 37.0 35.0 37.0 33.0 37.0 9 37.087331625491956 39.0 37.0 39.0 33.0 39.0 10 36.95113388059281 39.0 37.0 39.0 33.0 39.0 11 36.99780691128707 39.0 37.0 39.0 33.0 39.0 12 36.90650975157629 39.0 37.0 39.0 33.0 39.0 13 36.94294628427275 39.0 37.0 39.0 33.0 39.0 14 38.002819266826506 40.0 37.0 41.0 33.0 41.0 15 37.95763304282316 40.0 37.0 41.0 33.0 41.0 16 37.863763570774346 40.0 37.0 41.0 32.0 41.0 17 37.88186588183071 40.0 37.0 41.0 33.0 41.0 18 37.85683301969071 40.0 37.0 41.0 32.0 41.0 19 37.874346078581546 40.0 37.0 41.0 32.0 41.0 20 37.75340382998277 40.0 37.0 41.0 32.0 41.0 21 37.653793056827666 40.0 37.0 41.0 32.0 41.0 22 37.5037250271181 39.0 36.0 41.0 32.0 41.0 23 37.37853942050097 39.0 36.0 41.0 31.0 41.0 24 37.24334277908202 39.0 36.0 41.0 31.0 41.0 25 37.052601892171545 39.0 36.0 41.0 31.0 41.0 26 37.2038064205041 39.0 36.0 41.0 31.0 41.0 27 37.13803837641491 39.0 36.0 41.0 31.0 41.0 28 37.01909051976105 39.0 36.0 41.0 31.0 41.0 29 36.886431999987494 39.0 35.0 41.0 30.0 41.0 30 36.776958091198104 39.0 35.0 41.0 30.0 41.0 31 36.608347569686494 39.0 35.0 40.0 30.0 41.0 32 36.49114500135981 39.0 35.0 40.0 30.0 41.0 33 36.295184270249486 38.0 35.0 40.0 30.0 41.0 34 36.160030416040165 38.0 35.0 40.0 30.0 41.0 35 35.98311761285664 38.0 35.0 40.0 29.0 41.0 36 35.849308722807656 38.0 35.0 40.0 28.0 41.0 37 35.69301857316574 38.0 35.0 40.0 27.0 41.0 38 35.614772684645374 38.0 35.0 40.0 27.0 41.0 39 35.49290650584407 38.0 35.0 40.0 26.0 41.0 40 35.32694859595432 38.0 34.0 40.0 25.0 41.0 41 35.21646088428463 38.0 34.0 40.0 24.0 41.0 42 35.01818202421404 38.0 34.0 40.0 24.0 41.0 43 34.6782673407378 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 3.0 13 7.0 14 12.0 15 26.0 16 62.0 17 138.0 18 375.0 19 812.0 20 1665.0 21 3476.0 22 6328.0 23 11031.0 24 18014.0 25 27772.0 26 41125.0 27 57392.0 28 79084.0 29 103838.0 30 131718.0 31 161864.0 32 199501.0 33 245815.0 34 304830.0 35 377992.0 36 491315.0 37 696446.0 38 975087.0 39 1182622.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.1276809410529 20.66497185031432 13.220778875700617 23.986568332932162 2 18.866502342941637 22.5860589502246 35.222528657661684 23.324910049172075 3 19.626922884553466 24.526351450623167 31.91820335920624 23.92852230561712 4 13.849145193609194 16.016522505681515 36.227031669568646 33.90730063114064 5 13.227323951146774 37.854997077184215 35.06659956173394 13.851079409935071 6 32.874604950968596 36.81294291600109 14.013651269002212 16.29880086402811 7 26.762266448263034 32.285255097734584 21.890444424299073 19.062034029703312 8 26.597760372870017 34.676415377449615 19.331065936848425 19.394758312831943 9 24.738685420619763 14.413584685070507 21.655779047630958 39.19195084667877 10 16.47958170911262 26.89609858798301 33.99623550705383 22.62808419585054 11 33.37494177813484 22.06112436190399 23.558051497825865 21.00588236213531 12 21.03589202149442 26.60561446340541 31.029010900383565 21.32948261471661 13 30.86149604403918 20.613119222749823 26.36006667771189 22.165318055499114 14 20.749667080341485 22.328495578264253 27.516278677199224 29.405558664195038 15 23.277570593034632 28.82902543631231 25.28274725927408 22.610656711378976 16 22.365128463224103 27.868794486975496 26.465139560546053 23.300937489254352 17 22.016715536563332 26.48979593431636 27.09145443689688 24.402034092223435 18 22.909815503115066 25.591225456943956 29.15614244584976 22.34281659409122 19 23.08897473249202 24.74823927701729 29.902652259946173 22.260133730544517 20 23.845702679299897 24.592368793705475 29.761669381082033 21.80025914591259 21 22.87441348308987 25.444420391563533 30.006044914456844 21.675121210889756 22 21.822160726733916 25.815672700900606 29.63508566819945 22.727080904166026 23 22.539168857476 25.86881480601569 30.520155706367984 21.07186063014033 24 22.758907554619142 25.93006498966855 28.34353713851646 22.967490317195846 25 22.736244009790653 25.948254438147277 29.173862993401002 22.14163855866107 26 22.385408428337872 26.585100047827893 29.251700547363686 21.777790976470552 27 21.556997252240564 26.741107293910225 28.90782032966861 22.794075124180598 28 21.873388153061768 26.250050797600476 29.31847985445315 22.5580811948846 29 22.237294347868218 26.307608386449388 28.791083536263233 22.664013729419157 30 22.23371897829614 26.299031406984124 30.01641934747747 21.450830267242267 31 22.568182102364197 26.065264757093686 29.88166894344117 21.484884197100943 32 22.133432792430064 25.867701166312905 29.22419169295117 22.77467434830586 33 21.837595382263668 25.96157903950334 29.77507213259268 22.425753445640314 34 21.505769825912715 26.299031406984124 30.11598264441367 22.07921612268949 35 21.25283685061129 27.85154284035174 29.0315124868317 21.864107822205273 36 22.86005339218561 26.044007915047658 29.02332625813934 22.072612434627395 37 21.956872055692926 26.233600190061175 29.15708024770473 22.65244750654117 38 21.83943191089632 25.213076396465112 30.24481317424046 22.70267851839811 39 21.333663647986693 25.234333238511148 30.767735396080614 22.664267717421545 40 20.59770410475872 25.817235703992225 30.50632312900715 23.07873706224191 41 21.56270221352498 24.857825331278505 30.57886600999697 23.000606445199548 42 20.35528232524844 26.53232915594707 30.14243647173934 22.96995204706515 43 20.73261080910418 26.062373201374196 29.52305742160758 23.681958567914048 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 313.0 1 671.0 2 1029.0 3 2802.5 4 4576.0 5 4576.0 6 6845.5 7 9115.0 8 9655.0 9 10195.0 10 15135.0 11 20075.0 12 20075.0 13 35920.5 14 51766.0 15 76752.5 16 101739.0 17 94977.0 18 88215.0 19 88215.0 20 97103.0 21 105991.0 22 87322.0 23 68653.0 24 77007.0 25 85361.0 26 85361.0 27 93258.0 28 101155.0 29 111748.0 30 122341.0 31 136886.0 32 151431.0 33 151431.0 34 170656.5 35 189882.0 36 209012.0 37 228142.0 38 242940.0 39 257738.0 40 257738.0 41 268479.0 42 279220.0 43 298908.0 44 318596.0 45 331366.5 46 344137.0 47 344137.0 48 419861.0 49 495585.0 50 474097.0 51 452609.0 52 420576.5 53 388544.0 54 388544.0 55 352757.5 56 316971.0 57 274225.5 58 231480.0 59 208605.0 60 185730.0 61 185730.0 62 166952.0 63 148174.0 64 130286.0 65 112398.0 66 97011.5 67 81625.0 68 81625.0 69 70769.0 70 59913.0 71 51064.5 72 42216.0 73 34578.5 74 26941.0 75 26941.0 76 21346.5 77 15752.0 78 12499.5 79 9247.0 80 7395.0 81 5543.0 82 5543.0 83 4144.0 84 2745.0 85 2146.5 86 1548.0 87 1174.5 88 801.0 89 801.0 90 663.5 91 526.0 92 360.5 93 195.0 94 150.0 95 105.0 96 105.0 97 63.0 98 21.0 99 17.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5118352.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.46813714424445 #Duplication Level Percentage of deduplicated Percentage of total 1 76.69141149643104 33.3363279271255 2 12.337549673810313 10.725806024902303 3 4.337500393015876 5.656291858404849 4 2.016892568663509 3.5068225111949154 5 1.083130360783574 2.3540829533817687 6 0.66235682977 1.72748505089216 7 0.4566332504294056 1.389429772800127 8 0.3311414286841336 1.1515280828946368 9 0.23795647757718255 0.9309172321517671 >10 1.5628405201297226 13.156600428699589 >50 0.16081128725260152 4.862094093945249 >100 0.10476901380014815 8.867579523199867 >500 0.010646104624370477 3.2096569413681246 >1k 0.0056388253795789 4.465400041990627 >5k 4.0599542732963503E-4 1.1536801469777223 >10k+ 3.1577422125638274E-4 3.506297410071003 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 47374 0.9255713557801417 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 44754 0.8743830045295828 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 34976 0.6833449516563144 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19796 0.3867651150213975 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 11370 0.22214181439650887 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10475 0.20465571730900883 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10068 0.19670393908039152 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 9454 0.1847078903522071 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 8997 0.1757792351913272 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 7799 0.15237326389431596 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6116 0.11949158635435782 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5496 0.1073783123943019 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 5416 0.1058153093026818 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5233 0.1022399397306008 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5217 0.10192733911227676 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 1.9537538645251442E-5 0.0 0.0 2 1.9537538645251442E-5 0.0 1.9537538645251442E-5 1.9537538645251442E-5 0.0 3 1.9537538645251442E-5 0.0 1.9537538645251442E-5 1.9537538645251442E-5 0.0 4 1.9537538645251442E-5 0.0 1.9537538645251442E-5 1.9537538645251442E-5 0.0 5 1.9537538645251442E-5 0.0 1.9537538645251442E-5 1.9537538645251442E-5 0.0 6 1.9537538645251442E-5 0.0 1.9537538645251442E-5 1.9537538645251442E-5 0.0 7 1.9537538645251442E-5 0.0 5.861261593575432E-5 1.9537538645251442E-5 0.0 8 3.9075077290502884E-5 0.0 5.861261593575432E-5 3.9075077290502884E-5 0.0 9 3.9075077290502884E-5 0.0 9.76876932262572E-5 1.7583784780726296E-4 0.0 10 1.3676277051676009E-4 0.0 9.76876932262572E-5 2.3445046374301727E-4 0.0 11 1.953753864525144E-4 0.0 1.1722523187150864E-4 4.298258501955317E-4 0.0 12 1.953753864525144E-4 0.0 1.1722523187150864E-4 8.205766231005605E-4 0.0 13 1.953753864525144E-4 0.0 1.1722523187150864E-4 9.76876932262572E-4 0.0 14 2.3445046374301727E-4 0.0 1.1722523187150864E-4 0.001289477550586595 0.0 15 2.930630796787716E-4 0.0 1.1722523187150864E-4 0.0016606907848463724 0.0 16 3.321381569692745E-4 0.0 1.3676277051676009E-4 0.0024617298693016816 0.0 17 3.321381569692745E-4 0.0 1.3676277051676009E-4 0.003555832033435762 0.0 18 3.321381569692745E-4 0.0 1.3676277051676009E-4 0.004141958192793305 0.0 19 3.321381569692745E-4 0.0 1.3676277051676009E-4 0.0054314357433799 0.0 20 3.321381569692745E-4 0.0 1.3676277051676009E-4 0.008791892390363149 0.0 21 3.516756956145259E-4 0.0 1.3676277051676009E-4 0.014633616445293329 0.0 22 3.516756956145259E-4 0.0 1.3676277051676009E-4 0.024070247610949773 0.0 23 3.516756956145259E-4 0.0 1.3676277051676009E-4 0.030595785518463755 0.0 24 3.516756956145259E-4 0.0 1.3676277051676009E-4 0.04116559392554479 0.0 25 3.516756956145259E-4 0.0 1.3676277051676009E-4 0.04989887369997218 0.0 26 3.712132342597774E-4 0.0 1.3676277051676009E-4 0.060859432879958236 0.0 27 3.712132342597774E-4 0.0 1.3676277051676009E-4 0.11081691919586617 0.0 28 3.712132342597774E-4 0.0 1.3676277051676009E-4 0.21958239683398093 0.0 29 3.712132342597774E-4 0.0 1.3676277051676009E-4 0.3638280446518723 0.0 30 3.712132342597774E-4 0.0 1.3676277051676009E-4 0.5542604338271381 0.0 31 4.298258501955317E-4 0.0 1.3676277051676009E-4 0.8509965707712169 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 15210 0.0 21.540762 1 GTATTGG 2510 0.0 17.468126 1 CGCGATA 75 2.0690238E-4 17.266666 14 TTAACGG 915 0.0 16.983606 35 TAGACCG 100 5.885773E-6 16.65 5 GTATTAG 1495 0.0 16.210701 1 TAATACT 1485 0.0 15.946128 4 CTAATAC 1375 0.0 15.607272 3 ATTAGAG 1260 0.0 15.269842 3 TCTAATA 1405 0.0 15.142349 2 TAACGGC 985 0.0 15.02538 36 CTCTAAT 1270 0.0 15.003937 1 ATTGGAC 2925 0.0 14.483761 3 GTATCAA 22760 0.0 14.39521 2 TGCTAGA 1215 0.0 14.312757 16 AACGGCC 1090 0.0 14.256881 37 GGTAAAC 1190 0.0 14.1470585 35 TGGACCC 3305 0.0 14.105901 5 TTGGACC 3595 0.0 14.048679 4 TATACTG 665 0.0 13.909774 5 >>END_MODULE