##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088582_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3766574 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.730737800452083 31.0 31.0 34.0 30.0 34.0 2 31.910975331959495 31.0 31.0 34.0 30.0 34.0 3 31.99201953817979 33.0 31.0 34.0 30.0 34.0 4 35.667962450757635 37.0 35.0 37.0 33.0 37.0 5 35.57928318944484 37.0 35.0 37.0 33.0 37.0 6 35.61425157185283 37.0 35.0 37.0 33.0 37.0 7 35.484998568991344 37.0 35.0 37.0 33.0 37.0 8 35.50750682184925 37.0 35.0 37.0 33.0 37.0 9 37.11719721954221 39.0 37.0 39.0 33.0 39.0 10 36.98346959332274 39.0 37.0 39.0 33.0 39.0 11 37.030826953087875 39.0 37.0 39.0 33.0 39.0 12 36.93255860630907 39.0 37.0 39.0 33.0 39.0 13 36.96982483285872 39.0 37.0 39.0 33.0 39.0 14 38.02050855764416 40.0 37.0 41.0 33.0 41.0 15 37.98360818080303 40.0 37.0 41.0 33.0 41.0 16 37.87920508132855 40.0 37.0 41.0 32.0 41.0 17 37.90229662287267 40.0 37.0 41.0 33.0 41.0 18 37.879357474458224 40.0 37.0 41.0 33.0 41.0 19 37.90174067999195 40.0 37.0 41.0 32.0 41.0 20 37.78284085219088 40.0 37.0 41.0 32.0 41.0 21 37.683893108166735 40.0 37.0 41.0 32.0 41.0 22 37.53044145687832 39.0 36.0 41.0 32.0 41.0 23 37.39688268437047 39.0 36.0 41.0 32.0 41.0 24 37.263364532330975 39.0 36.0 41.0 31.0 41.0 25 37.06786060754415 39.0 36.0 41.0 31.0 41.0 26 37.226562122501775 39.0 36.0 41.0 31.0 41.0 27 37.163392249827034 39.0 36.0 41.0 31.0 41.0 28 37.050145304459704 39.0 36.0 41.0 31.0 41.0 29 36.91165472920484 39.0 36.0 41.0 30.0 41.0 30 36.79346217544113 39.0 35.0 41.0 30.0 41.0 31 36.613415002599176 39.0 35.0 40.0 30.0 41.0 32 36.49822862898751 39.0 35.0 40.0 30.0 41.0 33 36.29576878086027 38.0 35.0 40.0 30.0 41.0 34 36.15464796390566 38.0 35.0 40.0 30.0 41.0 35 35.96572402400696 38.0 35.0 40.0 29.0 41.0 36 35.831877722301485 38.0 35.0 40.0 28.0 41.0 37 35.6743613692443 38.0 35.0 40.0 27.0 41.0 38 35.59454719328493 38.0 35.0 40.0 26.0 41.0 39 35.460290173510465 38.0 34.0 40.0 26.0 41.0 40 35.293701915852445 38.0 34.0 40.0 25.0 41.0 41 35.1731703664922 38.0 34.0 40.0 24.0 41.0 42 34.95795091242068 38.0 34.0 40.0 24.0 41.0 43 34.610366343525975 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 7.0 14 10.0 15 15.0 16 36.0 17 107.0 18 264.0 19 597.0 20 1199.0 21 2435.0 22 4536.0 23 8092.0 24 13056.0 25 20313.0 26 29695.0 27 42278.0 28 57193.0 29 75045.0 30 95588.0 31 117985.0 32 145958.0 33 180938.0 34 224407.0 35 278755.0 36 363615.0 37 520466.0 38 725947.0 39 858031.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.068654432383376 21.02303047809495 13.45541067293514 23.45290441658653 2 18.9457050359292 22.634786944315973 35.33009042169356 23.089417598061264 3 19.879975808254397 24.755547083370725 31.98346826585645 23.381008842518426 4 13.81616291091055 16.064227066825186 36.271370216010624 33.84823980625364 5 13.147916382367637 37.964633112212844 35.04882686494411 13.838623640475403 6 32.773390354205176 36.77333831752675 13.844968929324104 16.608302398943977 7 26.432296298970897 32.339999161041305 21.880573699069764 19.347130840918034 8 26.656027466870423 34.68382673485241 19.183056007926567 19.477089790350593 9 24.464168233519374 14.505569252057708 21.87486559403851 39.15539692038441 10 16.651445053249983 26.807040031604316 33.8251949915228 22.716319923622898 11 33.249154271228974 22.245175589275558 23.51481744418137 20.990852695314096 12 20.94983398706623 26.661018740107057 31.144137882330202 21.24500939049651 13 31.24343236054834 20.709376743958835 26.355064310431707 21.692126585061118 14 20.64889737995324 22.66858423596616 27.48179114495029 29.20072723913031 15 23.21775703862449 28.973252616303302 25.337056964764265 22.47193338030794 16 22.25075094767818 27.899305841329546 26.591406408051455 23.258536802940817 17 21.909326618831862 26.399242388441063 27.05501073389239 24.636420258834686 18 23.090293725810245 25.33915436149668 29.188169408061544 22.38238250463153 19 23.06719581242795 24.698466033058157 30.06565117265717 22.168686981856723 20 23.981474942480887 24.343236054833916 29.887345901076152 21.78794310160905 21 22.894970336438366 25.165627968546485 30.244726374684262 21.694675320330887 22 21.800235439420547 25.54684973665724 29.897169151595055 22.75574567232716 23 22.495190589644594 25.818582085470776 30.717994655089743 20.968232669794883 24 22.68634573487737 25.851954587909333 28.528206269145386 22.933493408067914 25 22.657991055001176 25.75796997483655 29.42326368737213 22.160775282790144 26 22.396400548615265 26.341577252962505 29.562727295414877 21.69929490300735 27 21.587017804508818 26.450987024282547 29.19464744353888 22.76734772766976 28 21.88957392049114 26.17649354559342 29.37332440568007 22.56060812823537 29 22.239201990987034 26.15387352007421 28.86365699970318 22.743267489235574 30 22.01658589476803 26.316196097567712 30.248788421520455 21.4184295861438 31 22.583148505777398 25.8747339093829 30.165317341435475 21.37680024340422 32 22.217564290519714 25.73033212675498 29.193373075903988 22.858730506821317 33 21.918990573396407 25.816033350201007 29.818317654186536 22.44665842221605 34 21.451430398022183 26.205140268052613 30.196459700512985 22.14696963341222 35 21.078969907401262 27.995122357877477 29.25945434763793 21.66645338708333 36 22.77140977450596 26.034587399583813 29.198364349140626 21.995638476769606 37 21.91445063869713 26.496731512509776 29.167248539388847 22.421569309404248 38 21.798430085271125 25.18649573856773 30.40245591882703 22.61261825733412 39 21.288364439408333 25.096068735142335 31.031170501362777 22.584396324086555 40 20.48238000899491 25.845131411197546 30.676896298864698 22.99559228094284 41 21.71036597183541 24.73393593222913 30.653559441550865 22.902138654384594 42 20.340686257591116 26.553361224284988 30.272178377485748 22.83377414063815 43 20.798927619635244 26.24597313102039 29.530098174096675 23.425001075247692 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 188.0 1 430.5 2 673.0 3 1894.5 4 3116.0 5 3116.0 6 4809.0 7 6502.0 8 7101.5 9 7701.0 10 11271.5 11 14842.0 12 14842.0 13 26792.5 14 38743.0 15 58646.5 16 78550.0 17 73289.5 18 68029.0 19 68029.0 20 73452.0 21 78875.0 22 64359.0 23 49843.0 24 56391.5 25 62940.0 26 62940.0 27 69333.0 28 75726.0 29 84015.5 30 92305.0 31 101243.0 32 110181.0 33 110181.0 34 121850.5 35 133520.0 36 147637.0 37 161754.0 38 172645.0 39 183536.0 40 183536.0 41 190277.0 42 197018.0 43 210393.0 44 223768.0 45 236931.5 46 250095.0 47 250095.0 48 313768.5 49 377442.0 50 361105.0 51 344768.0 52 323686.5 53 302605.0 54 302605.0 55 273489.0 56 244373.0 57 210357.0 58 176341.0 59 157181.0 60 138021.0 61 138021.0 62 121936.0 63 105851.0 64 92309.0 65 78767.0 66 67088.0 67 55409.0 68 55409.0 69 47274.5 70 39140.0 71 32809.5 72 26479.0 73 21612.0 74 16745.0 75 16745.0 76 13478.0 77 10211.0 78 7970.0 79 5729.0 80 4451.0 81 3173.0 82 3173.0 83 2430.5 84 1688.0 85 1307.5 86 927.0 87 722.5 88 518.0 89 518.0 90 396.5 91 275.0 92 197.5 93 120.0 94 88.5 95 57.0 96 57.0 97 37.5 98 18.0 99 15.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3766574.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.03669101990231 #Duplication Level Percentage of deduplicated Percentage of total 1 77.84242366368034 36.61450030108864 2 12.350724212459436 11.618743973069616 3 4.107208609867473 5.795685070098563 4 1.819858206862346 3.424004327048704 5 0.9552205108341032 2.246520601198848 6 0.5933967436841658 1.6746851570932964 7 0.3805392545041462 1.2529515134538844 8 0.27423343959748425 1.0319226852537526 9 0.20168783434040058 0.8538055511708397 >10 1.2287925109220874 11.166275823250192 >50 0.13836187927600843 4.500792115154768 >100 0.09477421939529392 8.79333960937426 >500 0.0074072469483342914 2.4560413570693025 >1k 0.004749685060888259 4.0812122576752925 >5k 3.9580708840735487E-4 1.4270279810072843 >10k+ 2.2617547908991705E-4 3.062491676992746 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37361 0.9919093584780228 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 35444 0.9410143010597959 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 27573 0.7320445582643538 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14769 0.39210699165873286 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9139 0.2426342878169923 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8881 0.23578456177948448 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8869 0.23546596987076318 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7790 0.20681924741157348 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7388 0.1961464184694101 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6391 0.16967674071981595 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5197 0.13797684580204717 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4335 0.11509132702556754 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4265 0.11323287422469332 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4150 0.11017970176611423 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4001 0.10622385223282485 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3814 0.10125912832191801 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.3098651453549036E-5 2 0.0 0.0 0.0 2.6549325726774518E-5 5.3098651453549036E-5 3 0.0 0.0 0.0 2.6549325726774518E-5 5.3098651453549036E-5 4 0.0 0.0 0.0 5.3098651453549036E-5 5.3098651453549036E-5 5 0.0 0.0 0.0 1.0619730290709807E-4 7.964797718032355E-5 6 0.0 0.0 0.0 1.327466286338726E-4 7.964797718032355E-5 7 2.6549325726774518E-5 0.0 0.0 1.327466286338726E-4 7.964797718032355E-5 8 1.327466286338726E-4 0.0 0.0 1.592959543606471E-4 7.964797718032355E-5 9 1.327466286338726E-4 0.0 0.0 4.247892116283923E-4 7.964797718032355E-5 10 1.592959543606471E-4 0.0 0.0 5.840851659890394E-4 7.964797718032355E-5 11 1.8584528008742162E-4 0.0 0.0 9.026770747103336E-4 7.964797718032355E-5 12 1.8584528008742162E-4 0.0 0.0 0.0013009169606119514 7.964797718032355E-5 13 1.8584528008742162E-4 0.0 0.0 0.0014071142635190494 7.964797718032355E-5 14 1.8584528008742162E-4 0.0 0.0 0.0015664102178796966 7.964797718032355E-5 15 1.8584528008742162E-4 0.0 0.0 0.002044298080961638 7.964797718032355E-5 16 2.3894393154097064E-4 0.0 0.0 0.002628383246950677 7.964797718032355E-5 17 2.3894393154097064E-4 0.0 0.0 0.003796553578928756 7.964797718032355E-5 18 2.3894393154097064E-4 0.0 0.0 0.004300990767737472 7.964797718032355E-5 19 2.920425829945197E-4 0.0 0.0 0.005283315819628129 7.964797718032355E-5 20 2.920425829945197E-4 0.0 0.0 0.008655080186928493 7.964797718032355E-5 21 2.920425829945197E-4 0.0 0.0 0.014655227801179534 7.964797718032355E-5 22 2.920425829945197E-4 0.0 0.0 0.02492981685744127 7.964797718032355E-5 23 2.920425829945197E-4 0.0 0.0 0.03260257199247911 1.0619730290709807E-4 24 2.920425829945197E-4 0.0 0.0 0.04447012059234732 1.0619730290709807E-4 25 2.920425829945197E-4 0.0 0.0 0.05291280617346161 1.0619730290709807E-4 26 2.920425829945197E-4 0.0 0.0 0.06355908578989819 1.0619730290709807E-4 27 2.920425829945197E-4 0.0 0.0 0.11201160524126169 1.0619730290709807E-4 28 2.920425829945197E-4 0.0 0.0 0.22115588330403171 1.0619730290709807E-4 29 2.920425829945197E-4 0.0 0.0 0.3562123032761337 1.0619730290709807E-4 30 2.920425829945197E-4 0.0 0.0 0.5498099864757735 1.0619730290709807E-4 31 2.920425829945197E-4 0.0 0.0 0.8381887625199983 1.0619730290709807E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12070 0.0 21.626762 1 GTATTGG 2200 0.0 17.911364 1 TTAACGG 400 0.0 16.650002 35 ATTGGAC 2485 0.0 16.154928 3 TTGGACC 2980 0.0 15.209731 4 GTCTAGA 260 0.0 14.942307 1 TGGACCC 3030 0.0 14.653466 5 TAATACT 1000 0.0 14.429999 4 TATTGGA 2790 0.0 14.256273 2 GTACTAT 390 0.0 14.23077 1 GTATCAA 18335 0.0 14.1663475 2 TCGGGTA 355 0.0 14.070422 25 GGACCCT 3170 0.0 13.889589 6 TAACGGC 495 0.0 13.828283 36 CTAATAC 900 0.0 13.7722225 3 GTATTAG 820 0.0 13.762195 1 GGACCGT 835 0.0 13.7365265 6 CGAACTA 630 0.0 13.507937 24 ACCGTTA 605 0.0 13.454545 8 AACGGCC 545 0.0 13.238532 37 >>END_MODULE