##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088581_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4371436 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.662482076827843 31.0 31.0 34.0 30.0 34.0 2 31.837508315345346 31.0 31.0 34.0 30.0 34.0 3 31.923496306476864 31.0 31.0 34.0 30.0 34.0 4 35.61299673608398 37.0 35.0 37.0 33.0 37.0 5 35.519637254211204 37.0 35.0 37.0 33.0 37.0 6 35.54735972344099 37.0 35.0 37.0 33.0 37.0 7 35.42035980853889 37.0 35.0 37.0 33.0 37.0 8 35.43964111564255 37.0 35.0 37.0 33.0 37.0 9 37.04669929972668 39.0 37.0 39.0 33.0 39.0 10 36.90724077854508 39.0 37.0 39.0 33.0 39.0 11 36.94636956826086 39.0 37.0 39.0 33.0 39.0 12 36.853429856916584 39.0 37.0 39.0 32.0 39.0 13 36.89738657960451 39.0 37.0 39.0 33.0 39.0 14 37.932115899672326 40.0 37.0 41.0 33.0 41.0 15 37.889704207038605 40.0 37.0 41.0 33.0 41.0 16 37.79410404269901 40.0 37.0 41.0 32.0 41.0 17 37.82111599026041 40.0 37.0 41.0 32.0 41.0 18 37.795143289298984 40.0 37.0 41.0 32.0 41.0 19 37.81593073763404 40.0 37.0 41.0 32.0 41.0 20 37.69619891495609 40.0 37.0 41.0 32.0 41.0 21 37.600555515395854 39.0 37.0 41.0 32.0 41.0 22 37.44981740553905 39.0 36.0 41.0 32.0 41.0 23 37.32893378743278 39.0 36.0 41.0 31.0 41.0 24 37.19089791089244 39.0 36.0 41.0 31.0 41.0 25 37.001877643868056 39.0 36.0 41.0 31.0 41.0 26 37.15662564887145 39.0 36.0 41.0 31.0 41.0 27 37.088373019758265 39.0 36.0 41.0 31.0 41.0 28 36.972578576010264 39.0 36.0 41.0 31.0 41.0 29 36.82880362425528 39.0 35.0 41.0 30.0 41.0 30 36.714829634930034 39.0 35.0 40.0 30.0 41.0 31 36.54559371337016 39.0 35.0 40.0 30.0 41.0 32 36.43151335167666 39.0 35.0 40.0 30.0 41.0 33 36.22870882703075 38.0 35.0 40.0 30.0 41.0 34 36.09321765204844 38.0 35.0 40.0 29.0 41.0 35 35.89566197469207 38.0 35.0 40.0 28.0 41.0 36 35.750905194540195 38.0 35.0 40.0 27.0 41.0 37 35.587506256525316 38.0 35.0 40.0 27.0 41.0 38 35.50415835894658 38.0 35.0 40.0 26.0 41.0 39 35.36944747675592 38.0 34.0 40.0 25.0 41.0 40 35.19567780473053 38.0 34.0 40.0 25.0 41.0 41 35.076362778729916 38.0 34.0 40.0 24.0 41.0 42 34.86295578844114 38.0 34.0 40.0 23.0 41.0 43 34.51044142016491 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 2.0 12 2.0 13 8.0 14 15.0 15 31.0 16 66.0 17 177.0 18 332.0 19 761.0 20 1606.0 21 3038.0 22 5685.0 23 9852.0 24 16086.0 25 24760.0 26 36265.0 27 50999.0 28 69511.0 29 91304.0 30 115152.0 31 141812.0 32 173750.0 33 214247.0 34 264685.0 35 327558.0 36 424237.0 37 601218.0 38 830503.0 39 967773.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.058948135120815 20.97086632401801 13.477150300267462 23.49303524059371 2 18.71023617868362 22.978261605568516 35.29435178737605 23.01715042837182 3 19.80651209350886 24.874434853901555 32.18027211195589 23.138780940633698 4 13.579290649571446 16.091256969105807 36.55977120561756 33.76968117570519 5 13.069412431063842 38.25731407253818 34.93350926331759 13.739764233080386 6 32.56675838328641 37.17943028332108 13.93123449594138 16.322576837451123 7 26.438955071056743 32.49332713552251 21.92307058824606 19.144647205174685 8 26.94409800349359 34.56148048375866 19.14887922412681 19.345542288620948 9 24.645311060255715 14.351302409551462 21.765433601223947 39.23795292896888 10 16.358583312211366 27.109444127742005 33.90924629801283 22.622726262033805 11 33.31646625959982 22.206592982260293 23.66528984983424 20.811650908305644 12 21.050565534986674 26.703033053669323 31.257577601502117 20.988823809841893 13 31.292394535800135 20.644772106923217 26.41829824341475 21.6445351138619 14 20.637978000821697 22.419086085213188 27.852998419741247 29.089937494223868 15 23.056519642515642 29.08524795970935 25.377884978757553 22.48034741901746 16 22.14089374750082 27.905910094531865 26.562552900236902 23.39064325773041 17 21.914332041004375 26.351249337746225 27.310545093191347 24.423873528058056 18 23.05208174156044 25.32083278812729 29.384371634401145 22.24271383591113 19 22.979382518696372 24.65910515446183 30.312533455825502 22.0489788710163 20 23.802155630323764 24.34058281992462 30.07654692874378 21.78071462100783 21 22.79532400794613 25.23815972600308 30.42114765033733 21.545368615713464 22 21.662698481688857 25.6526688255301 30.095556700361165 22.589075992419883 23 22.39330508327241 25.712214475975397 30.936081415809358 20.958399024942835 24 22.518183956027265 25.776426785157096 28.77912429691296 22.926264961902678 25 22.522621856982468 25.862782847558556 29.545211230360003 22.069384065098973 26 22.239488351196265 26.465307967450514 29.716253423360193 21.578950257993025 27 21.470679200152993 26.557520229050592 29.386636336434986 22.585164234361432 28 21.793616559867285 26.21342277457568 29.54294652832616 22.450014137230877 29 22.048704361678862 26.235749534020396 29.12111717980087 22.59442892449987 30 21.886057579248558 26.415759032043475 30.37718040479147 21.321002983916497 31 22.524520546566393 26.005916591252852 30.219474790434997 21.25008807174576 32 22.004325352126852 25.885109607003283 29.3462605880539 22.76430445281596 33 21.794028323873437 25.938341542687578 29.989664723445568 22.27796540999342 34 21.367326434608675 26.389703520765256 30.27366750880031 21.969302535825754 35 21.030251844016473 28.14930837372433 29.284404484018523 21.53603529824067 36 22.670994153866143 26.184828051926186 29.403244151349806 21.74093364285786 37 21.82429297832566 26.582660709204024 29.29012342854842 22.302922883921898 38 21.734459797650015 25.351943846369934 30.480075654773398 22.433520701206653 39 21.18715680613876 25.301479879838112 31.05121520708527 22.460148106937858 40 20.38780849130583 26.113295493746218 30.65180412111718 22.84709189383077 41 21.584120183848054 24.965366071926937 30.72534974777167 22.72516399645334 42 20.244651871833423 26.784630954221907 30.237661034040077 22.733056139904598 43 20.64646491450407 26.461602091395136 29.61676666431809 23.275166329782706 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 216.0 1 481.0 2 746.0 3 2406.5 4 4067.0 5 4067.0 6 6136.5 7 8206.0 8 8945.0 9 9684.0 10 13908.0 11 18132.0 12 18132.0 13 32381.0 14 46630.0 15 72648.5 16 98667.0 17 90677.5 18 82688.0 19 82688.0 20 88824.5 21 94961.0 22 76313.5 23 57666.0 24 65865.5 25 74065.0 26 74065.0 27 81762.0 28 89459.0 29 98595.5 30 107732.0 31 118674.0 32 129616.0 33 129616.0 34 143974.0 35 158332.0 36 174481.5 37 190631.0 38 203468.0 39 216305.0 40 216305.0 41 222900.0 42 229495.0 43 245503.0 44 261511.0 45 275773.5 46 290036.0 47 290036.0 48 361780.5 49 433525.0 50 414165.0 51 394805.0 52 369081.5 53 343358.0 54 343358.0 55 308806.5 56 274255.0 57 236218.0 58 198181.0 59 176383.0 60 154585.0 61 154585.0 62 136611.0 63 118637.0 64 103199.5 65 87762.0 66 75592.0 67 63422.0 68 63422.0 69 55418.5 70 47415.0 71 40485.0 72 33555.0 73 28057.0 74 22559.0 75 22559.0 76 17852.5 77 13146.0 78 10403.0 79 7660.0 80 6088.0 81 4516.0 82 4516.0 83 3402.0 84 2288.0 85 1794.0 86 1300.0 87 1028.0 88 756.0 89 756.0 90 653.5 91 551.0 92 359.5 93 168.0 94 134.0 95 100.0 96 100.0 97 68.0 98 36.0 99 23.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4371436.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.70053369202719 #Duplication Level Percentage of deduplicated Percentage of total 1 76.074547207412 33.24498313343221 2 12.739879026854508 11.134790252908122 3 4.483617205747358 5.878093942857458 4 2.0559124799554596 3.5937789039261108 5 1.1471310354818982 2.5065119232623365 6 0.6920497845159208 1.81457669548789 7 0.45005922559997813 1.376747984621766 8 0.33500139871492435 1.171179192913423 9 0.2391700824585197 0.9406674221943115 >10 1.5061715759022873 12.536064461562951 >50 0.153718260711986 4.687294299108123 >100 0.10818685208993667 9.430561300821044 >500 0.0086916314020219 2.660907583346509 >1k 0.005235922458234269 4.261909358057122 >5k 3.141553474940558E-4 1.0337067091996572 >10k+ 3.141553474940558E-4 3.7282268363010767 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 48519 1.10990987858452 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 41418 0.947468978157292 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 34076 0.7795150152032421 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17579 0.40213330356432075 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 10762 0.24618912412305705 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10584 0.24211723561776954 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9611 0.21985910350740578 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 9196 0.2103656555877748 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 8143 0.18627746122784367 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 7207 0.16486573290790488 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6017 0.1376435569455895 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 5003 0.11444751793232247 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4801 0.10982661075216472 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4713 0.10781354227764058 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4561 0.10433642400346248 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4553 0.10415341777850573 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 4373 0.10003577771697904 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.287577811959274E-5 0.0 3 2.287577811959274E-5 0.0 0.0 2.287577811959274E-5 0.0 4 4.575155623918548E-5 0.0 0.0 2.287577811959274E-5 0.0 5 6.862733435877822E-5 0.0 0.0 2.287577811959274E-5 0.0 6 9.150311247837096E-5 0.0 0.0 2.287577811959274E-5 0.0 7 9.150311247837096E-5 0.0 0.0 2.287577811959274E-5 0.0 8 1.1437889059796368E-4 0.0 0.0 2.287577811959274E-5 0.0 9 2.5163355931552014E-4 0.0 0.0 1.1437889059796368E-4 0.0 10 2.973851155547056E-4 0.0 0.0 1.1437889059796368E-4 0.0 11 3.6601244991348383E-4 2.287577811959274E-5 0.0 2.973851155547056E-4 0.0 12 3.6601244991348383E-4 2.287577811959274E-5 0.0 5.718944529898185E-4 0.0 13 3.6601244991348383E-4 2.287577811959274E-5 0.0 6.405217873485967E-4 0.0 14 4.803913405114475E-4 2.287577811959274E-5 0.0 8.464037904249313E-4 0.0 15 4.803913405114475E-4 2.287577811959274E-5 0.0 0.0010294100153816733 0.0 16 5.032671186310403E-4 2.287577811959274E-5 0.0 0.0015784286902518988 2.287577811959274E-5 17 5.032671186310403E-4 2.287577811959274E-5 0.0 0.0024019567025572374 2.287577811959274E-5 18 5.26142896750633E-4 2.287577811959274E-5 0.0 0.002950975377427463 2.287577811959274E-5 19 5.718944529898185E-4 2.287577811959274E-5 0.0 0.003957509614689544 2.287577811959274E-5 20 5.947702311094112E-4 2.287577811959274E-5 0.0 0.006450969429725152 2.287577811959274E-5 21 5.947702311094112E-4 2.287577811959274E-5 0.0 0.011872528844068631 2.287577811959274E-5 22 5.947702311094112E-4 2.287577811959274E-5 0.0 0.020245063635839573 2.287577811959274E-5 23 6.405217873485967E-4 2.287577811959274E-5 0.0 0.02674178462180391 2.287577811959274E-5 24 7.091491217073749E-4 2.287577811959274E-5 0.0 0.03632673565391327 2.287577811959274E-5 25 7.091491217073749E-4 2.287577811959274E-5 0.0 0.044150251770813984 2.287577811959274E-5 26 7.091491217073749E-4 2.287577811959274E-5 0.0 0.05307180523745515 2.287577811959274E-5 27 7.091491217073749E-4 2.287577811959274E-5 0.0 0.09653578366468135 2.287577811959274E-5 28 7.091491217073749E-4 2.287577811959274E-5 0.0 0.19899639386233722 2.287577811959274E-5 29 7.320248998269677E-4 2.287577811959274E-5 0.0 0.3336203480961405 2.287577811959274E-5 30 8.235280123053385E-4 2.287577811959274E-5 0.0 0.5146821319127171 6.862733435877822E-5 31 8.69279568544524E-4 2.287577811959274E-5 0.0 0.7914332956035499 6.862733435877822E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 15020 0.0 20.581556 1 GTATTGG 2220 0.0 18.083334 1 TTGGACC 2990 0.0 16.705685 4 ATTGGAC 2645 0.0 16.296787 3 TGGACCC 3085 0.0 15.531604 5 GGACCCT 3245 0.0 14.765794 6 ATTAGAC 435 0.0 14.034483 3 TATTGGA 3040 0.0 13.935856 2 GTATCAA 22165 0.0 13.921949 2 TAGCGAA 510 0.0 13.784313 10 TTAACGG 570 0.0 13.631578 35 GATCGGT 150 1.3077824E-6 13.566667 11 CGAACTA 710 0.0 13.549295 24 GTATTAG 1095 0.0 13.347033 1 TTAGACT 555 0.0 13.0 4 TAGATGT 900 0.0 12.95 4 CGGGTAA 415 0.0 12.927711 26 ACCGTTA 635 0.0 12.818897 8 GACCGTT 655 0.0 12.709923 7 ATTAGAG 895 0.0 12.608939 3 >>END_MODULE