##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088575_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2940064 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.524523275683794 31.0 31.0 34.0 30.0 34.0 2 31.70104222221013 31.0 31.0 34.0 30.0 34.0 3 31.779914654919075 31.0 31.0 34.0 30.0 34.0 4 35.48250684338844 37.0 35.0 37.0 33.0 37.0 5 35.384347075437816 37.0 35.0 37.0 33.0 37.0 6 35.42703934336123 37.0 35.0 37.0 33.0 37.0 7 35.29246982378615 37.0 35.0 37.0 32.0 37.0 8 35.317564175473734 37.0 35.0 37.0 32.0 37.0 9 36.89070952196959 39.0 37.0 39.0 33.0 39.0 10 36.739306015107154 39.0 37.0 39.0 32.0 39.0 11 36.789200847328495 39.0 37.0 39.0 32.0 39.0 12 36.68453679919893 39.0 35.0 39.0 32.0 39.0 13 36.74222329854044 39.0 35.0 39.0 32.0 39.0 14 37.719306110343176 40.0 37.0 41.0 32.0 41.0 15 37.67917739205677 39.0 37.0 41.0 32.0 41.0 16 37.57634459658021 39.0 36.0 41.0 32.0 41.0 17 37.61124553751211 39.0 36.0 41.0 32.0 41.0 18 37.59256703255439 39.0 36.0 41.0 32.0 41.0 19 37.62541393656737 39.0 37.0 41.0 32.0 41.0 20 37.499219064619 39.0 36.0 41.0 32.0 41.0 21 37.3959427413825 39.0 36.0 41.0 31.0 41.0 22 37.23862065587688 39.0 36.0 41.0 31.0 41.0 23 37.11664337919174 39.0 36.0 40.0 31.0 41.0 24 36.97207033588384 39.0 36.0 40.0 31.0 41.0 25 36.77665350142038 39.0 35.0 40.0 30.0 41.0 26 36.92541488892759 39.0 36.0 40.0 31.0 41.0 27 36.838440931898084 39.0 35.0 40.0 30.0 41.0 28 36.71795784037354 39.0 35.0 40.0 30.0 41.0 29 36.56566149580417 39.0 35.0 40.0 30.0 41.0 30 36.444681136192955 39.0 35.0 40.0 30.0 41.0 31 36.25396317903284 38.0 35.0 40.0 30.0 41.0 32 36.1361558795999 38.0 35.0 40.0 30.0 41.0 33 35.92988247874876 38.0 35.0 40.0 29.0 41.0 34 35.78241494062714 38.0 35.0 40.0 28.0 41.0 35 35.573588193998496 38.0 34.0 40.0 27.0 41.0 36 35.42156803389314 38.0 34.0 40.0 26.0 41.0 37 35.25030475527063 38.0 34.0 40.0 26.0 41.0 38 35.15280993883126 38.0 34.0 40.0 25.0 41.0 39 34.99888029648334 38.0 34.0 40.0 24.0 41.0 40 34.809818425721346 38.0 33.0 40.0 24.0 41.0 41 34.67479143311166 38.0 33.0 40.0 23.0 41.0 42 34.44313253044832 38.0 33.0 40.0 22.0 41.0 43 34.072004895131535 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 2.0 13 5.0 14 16.0 15 9.0 16 52.0 17 124.0 18 262.0 19 587.0 20 1253.0 21 2433.0 22 4535.0 23 7875.0 24 12619.0 25 19193.0 26 27642.0 27 38593.0 28 52112.0 29 67955.0 30 84544.0 31 103536.0 32 125289.0 33 152505.0 34 186923.0 35 228324.0 36 295412.0 37 414883.0 38 561621.0 39 551758.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.406853728354214 21.599291716098698 13.978267139762943 23.015587415784147 2 19.090978971886326 23.59054088618479 34.70036706683936 22.61811307508952 3 20.128949573886825 24.938436714302817 32.40238987994819 22.530223831862166 4 13.968505447500462 16.347739368938907 36.31410744800113 33.3696477355595 5 12.7516952011929 38.71147022649847 34.771760070529076 13.765074501779553 6 32.29150793996321 37.38996838164067 13.668852106620808 16.64967157177531 7 26.1096016957454 32.82394532908127 21.759152181721213 19.307300793452114 8 27.205972386995658 34.31469519030878 19.043122870794647 19.43620955190091 9 24.56347889025545 14.203704409155717 21.842211598114872 39.390605102473955 10 16.37494966095976 27.273147795422144 33.62341772151899 22.72848482209911 11 33.21305250497949 22.198870500778213 23.753258432469497 20.834818561772806 12 20.914544717393905 26.90472044145978 31.19867458667566 20.98206025447065 13 31.523089293294294 20.50707059438162 26.645712474286277 21.32412763803781 14 20.527002133286896 22.438253044831676 27.92894984598975 29.10579497589168 15 22.896474362462857 29.188106109254765 25.581824069135912 22.33359545914647 16 21.868231439859812 28.015546600346113 26.7008133156285 23.41540864416557 17 21.83469475494411 26.222014214656554 27.338486509137216 24.60480452126212 18 23.002526475614136 25.137071846055054 29.751903359926857 22.108498318403953 19 22.87749518377831 24.310865341706847 30.754228479380043 22.0574109951348 20 23.814209486596212 24.079679898124667 30.584674347225093 21.52143626805403 21 22.813959151909618 24.8717374859867 31.007624323824245 21.306679038279437 22 21.451301740370276 25.272477061723826 30.75433051797512 22.521890679930777 23 22.28063742830088 25.50682570175343 31.645059427277772 20.567477442667915 24 22.421314638048695 25.46097635969829 29.207731532374805 22.909977469878207 25 22.35597592433362 25.68818229807242 30.07349499874833 21.88234677884563 26 22.150776309631354 26.35704528881004 30.13485420725535 21.357324194303253 27 21.058283084994066 26.568095116296785 29.823194325021497 22.550427473687648 28 21.561605461649812 26.07001072085506 30.02907419702428 22.339309620470846 29 21.840885096378855 25.99018252663888 29.44561751036712 22.723314866615148 30 21.752383621581025 26.12657411539341 30.93456468974825 21.186477573277315 31 22.447096389738455 25.71736533626479 30.838682423239767 20.99685585075699 32 22.030404780304103 25.595871382391678 29.793263003798558 22.580460833505665 33 21.6966365358033 25.800118636873208 30.348659076809213 22.154585750514276 34 21.107533713551813 26.366704942477444 30.808751102016828 21.717010241953915 35 20.807948398402214 28.29390788771945 29.627620351121607 21.27052336275673 36 22.684166058970145 25.988005703277206 29.676700915354225 21.651127322398427 37 21.85010258280092 26.57112226128411 29.57527455184649 22.00350060406848 38 21.621434091230668 25.267239080509814 30.80276483777224 22.308561990487284 39 21.111411180164787 25.135337189938724 31.490504968599325 22.262746661297168 40 20.230682053179795 25.93382320929068 30.96925781207484 22.866236925454682 41 21.510041958270296 24.8750027210292 30.976638603785496 22.638316716915003 42 20.28564684306192 26.78254623028614 30.409372040880744 22.522434885771194 43 20.62941486988038 26.58928513120803 29.610375828553394 23.170924170358195 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 162.0 1 382.0 2 602.0 3 1508.0 4 2414.0 5 2414.0 6 3908.5 7 5403.0 8 5954.5 9 6506.0 10 9398.0 11 12290.0 12 12290.0 13 22685.5 14 33081.0 15 52753.0 16 72425.0 17 66409.0 18 60393.0 19 60393.0 20 64322.5 21 68252.0 22 53928.0 23 39604.0 24 44054.5 25 48505.0 26 48505.0 27 52438.5 28 56372.0 29 62036.5 30 67701.0 31 75126.0 32 82551.0 33 82551.0 34 92722.5 35 102894.0 36 113869.5 37 124845.0 38 133830.0 39 142815.0 40 142815.0 41 148593.5 42 154372.0 43 166074.0 44 177776.0 45 189694.5 46 201613.0 47 201613.0 48 255900.5 49 310188.0 50 291521.0 51 272854.0 52 252479.0 53 232104.0 54 232104.0 55 205838.0 56 179572.0 57 154212.0 58 128852.0 59 114331.0 60 99810.0 61 99810.0 62 88308.0 63 76806.0 64 66666.5 65 56527.0 66 48585.5 67 40644.0 68 40644.0 69 35028.5 70 29413.0 71 25341.0 72 21269.0 73 17475.5 74 13682.0 75 13682.0 76 10763.0 77 7844.0 78 6141.5 79 4439.0 80 3504.0 81 2569.0 82 2569.0 83 1936.0 84 1303.0 85 1007.5 86 712.0 87 565.0 88 418.0 89 418.0 90 376.0 91 334.0 92 212.5 93 91.0 94 65.0 95 39.0 96 39.0 97 24.5 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2940064.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.56457409971916 #Duplication Level Percentage of deduplicated Percentage of total 1 78.70964005668483 35.86371226725039 2 11.54368192966703 10.519659013358048 3 3.847286411345093 5.258999003177283 4 1.6806453372721328 3.0631155602193436 5 0.9293681645241273 2.117313229918979 6 0.5845065048288604 1.5979673970625476 7 0.4043520346513522 1.2896889771670625 8 0.2966380063727569 1.0812947537731556 9 0.22885671935434498 0.9384983052515715 >10 1.504493420944216 13.33606428259381 >50 0.1581116641916028 4.99009373676783 >100 0.09964489870796485 8.628115529973009 >500 0.007769500300560352 2.4071928912907095 >1k 0.004258283818572996 3.720074130936478 >5k 4.482404019550521E-4 1.5328124198531339 >10k+ 2.9882693463670145E-4 3.6553985014068098 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37072 1.260924932246373 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31255 1.0630720963897384 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25861 0.8796067024391306 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13198 0.44890179261403834 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8901 0.3027485115970264 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7838 0.2665928360743168 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7785 0.26479015422793517 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7750 0.2635997039520228 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6861 0.23336226694384887 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5895 0.20050583932866767 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4248 0.14448665063073457 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3665 0.12465715032053724 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3542 0.12047356792233095 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 3521 0.11975929775678353 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3442 0.11707228141972419 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3383 0.11506552238318621 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3245 0.1103717470095889 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3224 0.1096574768440415 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3116 0.10598408742122621 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 2991 0.10173247929296776 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.401286502606746E-5 0.0 5 3.401286502606746E-5 0.0 0.0 3.401286502606746E-5 0.0 6 3.401286502606746E-5 0.0 0.0 3.401286502606746E-5 0.0 7 6.802573005213492E-5 0.0 0.0 3.401286502606746E-5 0.0 8 1.0203859507820237E-4 0.0 0.0 3.401286502606746E-5 0.0 9 1.0203859507820237E-4 0.0 0.0 1.0203859507820237E-4 0.0 10 1.700643251303373E-4 0.0 0.0 1.3605146010426983E-4 0.0 11 2.7210292020853966E-4 0.0 0.0 1.3605146010426983E-4 0.0 12 2.7210292020853966E-4 0.0 0.0 2.0407719015640475E-4 0.0 13 3.401286502606746E-4 0.0 0.0 3.401286502606746E-4 0.0 14 3.741415152867421E-4 0.0 0.0 4.7618011036494444E-4 0.0 15 3.741415152867421E-4 0.0 0.0 6.802573005213492E-4 0.0 16 3.741415152867421E-4 0.0 0.0 0.0010884116808341586 0.0 17 3.741415152867421E-4 0.0 0.0 0.001632617521251238 0.0 18 3.741415152867421E-4 0.0 0.0 0.00214281049664225 0.0 19 3.741415152867421E-4 0.0 0.0 0.0029251063922418013 0.0 20 3.741415152867421E-4 0.0 0.0 0.005544096999248996 0.0 21 3.741415152867421E-4 0.0 0.0 0.011190232593576195 0.0 22 3.741415152867421E-4 0.0 0.0 0.01897917868454564 0.0 23 3.741415152867421E-4 0.0 0.0 0.024149134168507898 0.0 24 3.741415152867421E-4 0.0 0.0 0.03234623463979015 0.0 25 3.741415152867421E-4 0.0 0.0 0.038400524614430165 0.0 26 4.081543803128095E-4 0.0 0.0 0.047890113956702986 0.0 27 4.081543803128095E-4 0.0 0.0 0.08921574496337495 0.0 28 4.081543803128095E-4 0.0 0.0 0.18618642315269326 0.0 29 4.081543803128095E-4 0.0 0.0 0.3128503325097685 0.0 30 4.4216724533887696E-4 0.0 0.0 0.48189427168932375 0.0 31 4.4216724533887696E-4 0.0 0.0 0.7171952719396585 3.401286502606746E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9645 0.0 22.710213 1 TATACCG 135 5.638867E-11 19.185184 5 GTATTGG 1575 0.0 18.55873 1 ATTGGAC 1720 0.0 15.918606 3 TAATACT 730 0.0 15.458904 4 TTGGACC 2120 0.0 15.096699 4 TGGACCC 1985 0.0 15.005038 5 GTATCAA 15080 0.0 14.500664 2 TAGTACT 530 0.0 14.311321 4 TATTGGA 1965 0.0 14.310433 2 TATACTG 365 0.0 14.191781 5 TTATGCG 340 0.0 14.1470585 4 TGCGCTA 105 1.657016E-4 14.095238 5 GGACCCT 2225 0.0 13.968539 6 GTATTAG 625 0.0 13.912 1 GTTTCGC 80 0.0063016987 13.875001 32 TCTAATA 720 0.0 13.875001 2 CCGTTTA 360 0.0 13.875001 27 CTCGTCT 515 0.0 13.650486 13 CTCTAAT 615 0.0 13.536585 1 >>END_MODULE