##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088572_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2146262 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.248121617957175 31.0 31.0 33.0 30.0 34.0 2 31.430844882870776 31.0 31.0 34.0 30.0 34.0 3 31.4800112940545 31.0 31.0 34.0 28.0 34.0 4 35.220368249542695 37.0 35.0 37.0 33.0 37.0 5 35.11297781911062 37.0 35.0 37.0 32.0 37.0 6 35.19633017776954 37.0 35.0 37.0 32.0 37.0 7 35.044340812072335 37.0 35.0 37.0 32.0 37.0 8 35.094704653951844 37.0 35.0 37.0 32.0 37.0 9 36.60847790251144 38.0 35.0 39.0 32.0 39.0 10 36.412728734888844 38.0 35.0 39.0 32.0 39.0 11 36.51228880723789 38.0 35.0 39.0 32.0 39.0 12 36.363243164161695 38.0 35.0 39.0 32.0 39.0 13 36.45383601815622 38.0 35.0 39.0 32.0 39.0 14 37.295418266735375 39.0 36.0 40.0 32.0 41.0 15 37.28332002337086 39.0 36.0 40.0 32.0 41.0 16 37.16654397273026 39.0 36.0 40.0 31.0 41.0 17 37.23493264102891 39.0 36.0 40.0 32.0 41.0 18 37.239699067495025 39.0 36.0 40.0 32.0 41.0 19 37.28628424675086 39.0 36.0 40.0 31.0 41.0 20 37.16441003008952 39.0 36.0 40.0 31.0 41.0 21 37.0671437131161 39.0 36.0 40.0 31.0 41.0 22 36.90647320783763 39.0 36.0 40.0 31.0 41.0 23 36.75733391356694 39.0 35.0 40.0 30.0 41.0 24 36.61262697657602 38.0 35.0 40.0 30.0 41.0 25 36.40724245222624 38.0 35.0 40.0 30.0 41.0 26 36.520605126494345 38.0 35.0 40.0 30.0 41.0 27 36.40891978705302 38.0 35.0 40.0 30.0 41.0 28 36.27109225248362 38.0 35.0 40.0 30.0 41.0 29 36.09118085303658 38.0 35.0 40.0 29.0 41.0 30 35.952985236657966 38.0 35.0 40.0 29.0 41.0 31 35.72499536403291 38.0 34.0 40.0 28.0 41.0 32 35.59419912387211 38.0 34.0 40.0 27.0 41.0 33 35.37047480689683 38.0 34.0 40.0 27.0 41.0 34 35.20524940571095 38.0 34.0 40.0 26.0 41.0 35 34.99334657185376 38.0 33.0 40.0 25.0 41.0 36 34.833339545684545 38.0 33.0 40.0 25.0 41.0 37 34.64915513576628 38.0 33.0 40.0 24.0 41.0 38 34.51861422324022 38.0 33.0 40.0 24.0 41.0 39 34.33970037208878 38.0 33.0 40.0 23.0 41.0 40 34.11123525459613 37.0 33.0 40.0 22.0 41.0 41 33.940434578816564 37.0 33.0 40.0 21.0 41.0 42 33.67129455770078 37.0 33.0 40.0 19.0 41.0 43 33.2726130360599 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 5.0 14 8.0 15 18.0 16 56.0 17 134.0 18 274.0 19 658.0 20 1301.0 21 2498.0 22 4433.0 23 7352.0 24 11616.0 25 17260.0 26 24508.0 27 33477.0 28 44659.0 29 57062.0 30 70109.0 31 84495.0 32 102108.0 33 123505.0 34 149491.0 35 181299.0 36 234795.0 37 321085.0 38 401831.0 39 272222.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.97019003271735 23.1215480682228 15.464421398692238 21.443840500367617 2 19.874880140448838 25.074058991865854 33.67231027712367 21.378750590561637 3 21.218704892506135 25.102713461823395 32.979431215760236 20.699150429910233 4 14.78854864876702 17.37830702868522 35.36548659949251 32.46765772305525 5 12.329016681094853 39.85533918971682 34.35591740430572 13.459726724882609 6 31.93361295126131 37.96325891247201 13.143455924765943 16.959672211500738 7 25.007384932501253 33.81642129432474 21.442629091881606 19.733564681292407 8 27.414779742640928 34.84872769494125 18.747711136850953 18.98878142556687 9 24.223696827321177 14.309483185184288 22.14683016332582 39.319989824168715 10 16.532138201207495 28.36620133049926 33.142179286592224 21.959481181701022 11 33.087199978381015 22.574923285227992 23.415780552420905 20.922096183970083 12 20.516833452765784 28.049883937748515 31.180070280329243 20.253212329156458 13 32.054846985130425 20.856866496261873 26.721062013864106 20.367224504743596 14 19.90842683698449 23.26165211889322 28.73251261961494 28.097408424507353 15 22.53326947036289 30.03962237601933 26.04155503848086 21.385553115136922 16 20.957366807966597 28.492280998312413 27.46789534548904 23.08245684823195 17 21.36756835838309 26.83628559793725 27.978923356048796 23.817222687630867 18 22.43621701357989 25.25423270784275 30.65786003759094 21.651690240986422 19 22.347131897224102 24.685103682588615 31.96012416005129 21.007640260135997 20 23.162922327283436 24.332211072087194 31.743421818957795 20.761444781671575 21 22.11668472907781 25.26825709070002 32.29265578946093 20.32240239076124 22 20.707956437750845 25.701335624448458 31.85943747781026 21.73127045999044 23 21.62885985028855 25.960111114113747 32.65803522589506 19.752993809702637 24 21.661101953070037 25.92064715305028 30.353749914968443 22.06450097891124 25 21.624573327953435 26.10930072842924 31.13426972103126 21.13185622258606 26 21.276013832421206 26.94307591524241 31.30568402180163 20.475226230534762 27 20.408691949072388 26.912417962019546 30.93233724494027 21.74655284396779 28 20.718719336222698 26.75898841800302 31.147874770181833 21.37441747559245 29 21.0357356184846 26.34752886646644 30.588064271743153 22.0286712433058 30 20.91804262480536 26.63887260735176 32.20594689744309 20.237137870399792 31 21.554730969471574 26.378186819689304 31.95094541113806 20.116136799701064 32 21.185158195970484 26.144990686132445 30.860351625290853 21.809499492606214 33 20.808596527357796 26.308763794914135 31.48422699558581 21.398412682142254 34 20.23327068177138 27.00961019670478 31.84918709831325 20.907932023210588 35 19.73659320250743 28.857707027380624 30.833001749087487 20.57269802102446 36 21.91009298957909 26.511069012077744 30.746525820240027 20.83231217810314 37 20.900710164928608 27.257483009995987 30.703101485279987 21.138705339795422 38 20.835666847756702 25.517900424086154 32.09631442945921 21.550118298697925 39 20.208157252003716 25.576141216682775 32.79389934686446 21.421802184449056 40 19.248069434207007 26.358338357572375 32.08862664483647 22.304965563384155 41 20.671520997902398 25.259823823932027 32.15767692853901 21.91097824962656 42 19.572773501091664 27.192066951751464 31.426824870402587 21.80833467675428 43 19.87856095854094 27.10573080080624 30.617604001748155 22.39810423890466 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 174.0 1 277.0 2 380.0 3 906.0 4 1432.0 5 1432.0 6 2593.0 7 3754.0 8 4389.0 9 5024.0 10 7670.5 11 10317.0 12 10317.0 13 19980.0 14 29643.0 15 49581.0 16 69519.0 17 61300.0 18 53081.0 19 53081.0 20 57392.0 21 61703.0 22 48432.0 23 35161.0 24 38018.5 25 40876.0 26 40876.0 27 43778.5 28 46681.0 29 50233.0 30 53785.0 31 58920.5 32 64056.0 33 64056.0 34 70538.0 35 77020.0 36 84149.0 37 91278.0 38 96847.5 39 102417.0 40 102417.0 41 107042.0 42 111667.0 43 118557.0 44 125447.0 45 133976.5 46 142506.0 47 142506.0 48 185640.0 49 228774.0 50 213368.5 51 197963.0 52 181026.0 53 164089.0 54 164089.0 55 144197.5 56 124306.0 57 104973.0 58 85640.0 59 74939.5 60 64239.0 61 64239.0 62 56293.5 63 48348.0 64 41570.0 65 34792.0 66 29872.0 67 24952.0 68 24952.0 69 21371.5 70 17791.0 71 14770.0 72 11749.0 73 9622.5 74 7496.0 75 7496.0 76 6019.0 77 4542.0 78 3532.5 79 2523.0 80 2007.5 81 1492.0 82 1492.0 83 1139.0 84 786.0 85 594.5 86 403.0 87 312.5 88 222.0 89 222.0 90 189.5 91 157.0 92 104.0 93 51.0 94 36.0 95 21.0 96 21.0 97 11.5 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2146262.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.061949449006 #Duplication Level Percentage of deduplicated Percentage of total 1 81.0463946412525 38.95247722272068 2 10.701625112621045 10.286819303700117 3 3.269773924432257 4.7145512719722324 4 1.4379544813881955 2.7644358237780433 5 0.7722002108493847 1.855672374917745 6 0.48484742310156503 1.3981627403752945 7 0.33389029099322665 1.1233192801061251 8 0.23448403444204619 0.9015807847962083 9 0.19187906816812222 0.8299873867156798 >10 1.2783557946882256 11.941911210524053 >50 0.1395874964203198 4.6460011590596775 >100 0.09688627852423073 8.621272315808438 >500 0.007078805981502094 2.308890304701033 >1k 0.0041697076329395896 3.681379971505109 >5k 4.8484972476041735E-4 1.4071642673712337 >10k+ 3.8787977980833384E-4 4.566374581948336 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 36372 1.6946672866593175 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 28521 1.3288685165184866 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21291 0.992003772139655 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11795 0.5495601189416763 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6467 0.3013145645778567 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6399 0.2981462654606008 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6029 0.2809069908520022 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5872 0.27359194730186714 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5426 0.2528116325033943 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4526 0.21087826183383016 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3476 0.16195599605267205 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2944 0.13716871472355194 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2895 0.13488567565376455 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2819 0.13134463546389025 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2771 0.12910818902818016 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2738 0.12757063210362948 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2354 0.1096790606179488 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2349 0.10944609744756233 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2316 0.10790854052301165 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 2294 0.10688350257331118 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 4.6592634077293455E-5 0.0 0.0 0.0 0.0 6 9.318526815458691E-5 0.0 0.0 0.0 0.0 7 9.318526815458691E-5 0.0 0.0 0.0 0.0 8 1.3977790223188035E-4 0.0 0.0 0.0 0.0 9 1.3977790223188035E-4 0.0 0.0 9.318526815458691E-5 0.0 10 1.3977790223188035E-4 0.0 0.0 9.318526815458691E-5 0.0 11 1.3977790223188035E-4 0.0 0.0 2.3296317038646726E-4 0.0 12 1.3977790223188035E-4 0.0 0.0 5.12518974850228E-4 0.0 13 1.8637053630917382E-4 0.0 0.0 6.057042430048149E-4 0.0 14 2.795558044637607E-4 0.0 0.0 6.988895111594018E-4 0.0 15 2.795558044637607E-4 0.0 0.0 8.852600474685756E-4 0.0 16 3.261484385410542E-4 0.0 0.0 0.0014909642904733906 0.0 17 3.261484385410542E-4 0.0 0.0 0.002376224337941966 0.0 18 3.261484385410542E-4 0.0 0.0 0.002795558044637607 0.0 19 3.261484385410542E-4 0.0 0.0 0.004100151798801824 0.0 20 3.261484385410542E-4 0.0 0.0 0.007175265647903191 0.0 21 4.1933370669564106E-4 0.0 0.0 0.01309253017571946 0.0 22 4.1933370669564106E-4 0.0 0.0 0.021525796943709576 0.0 23 4.1933370669564106E-4 4.6592634077293455E-5 0.0 0.027443061471525844 0.0 24 4.1933370669564106E-4 4.6592634077293455E-5 0.0 0.03564336506912949 0.0 25 4.1933370669564106E-4 4.6592634077293455E-5 0.0 0.04211974120587328 0.0 26 4.1933370669564106E-4 4.6592634077293455E-5 0.0 0.05171782382579573 0.0 27 4.1933370669564106E-4 4.6592634077293455E-5 0.0 0.10036053380249009 0.0 28 4.1933370669564106E-4 4.6592634077293455E-5 0.0 0.21516478416894116 0.0 29 4.1933370669564106E-4 4.6592634077293455E-5 0.0 0.366451067017913 0.0 30 4.1933370669564106E-4 9.318526815458691E-5 0.0 0.5697347294971443 0.0 31 4.1933370669564106E-4 9.318526815458691E-5 0.0 0.840857267192915 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9730 0.0 21.142859 1 TAGGAGT 150 2.5102054E-10 17.266666 4 ACGTTTA 175 7.2759576E-12 16.914286 26 TCACGTT 180 1.0913936E-11 16.444445 24 GTATTGG 1085 0.0 16.027649 1 CATTGCG 140 3.477362E-8 15.857143 29 CTAATAC 485 0.0 15.257732 3 CGAACTA 355 0.0 15.112677 24 TAGACTG 200 6.184564E-11 14.799999 5 ATAGTAC 315 0.0 14.682539 3 ATTGGAC 1210 0.0 14.524793 3 GTATCAA 14285 0.0 14.41407 2 TAATACT 465 0.0 14.32258 4 CTGTGCG 220 1.8189894E-11 14.295454 9 CCGTTTA 290 0.0 14.034483 27 TCTATAC 145 8.91956E-7 14.034483 3 AGTACCG 215 1.9826984E-10 13.767442 5 TAGGTCG 135 6.572849E-6 13.703704 21 GAGTAAT 420 0.0 13.654763 1 TAATACA 475 0.0 13.631578 4 >>END_MODULE