##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088570_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2301795 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.59114517148573 31.0 31.0 34.0 30.0 34.0 2 31.75629019960509 31.0 31.0 34.0 30.0 34.0 3 31.89166194209302 31.0 31.0 34.0 30.0 34.0 4 35.58225645637427 37.0 35.0 37.0 33.0 37.0 5 35.48353524097498 37.0 35.0 37.0 33.0 37.0 6 35.52857009420909 37.0 35.0 37.0 33.0 37.0 7 35.38697190670759 37.0 35.0 37.0 33.0 37.0 8 35.421070512361005 37.0 35.0 37.0 33.0 37.0 9 37.0108063489581 39.0 37.0 39.0 33.0 39.0 10 36.85195944903869 39.0 37.0 39.0 32.0 39.0 11 36.92468225884581 39.0 37.0 39.0 33.0 39.0 12 36.76654784635469 39.0 37.0 39.0 32.0 39.0 13 36.82132726850132 39.0 37.0 39.0 32.0 39.0 14 37.82465336834948 40.0 37.0 41.0 32.0 41.0 15 37.83403387356389 40.0 37.0 41.0 32.0 41.0 16 37.720353028831845 40.0 37.0 41.0 32.0 41.0 17 37.74462712795883 40.0 37.0 41.0 32.0 41.0 18 37.71290101855291 40.0 37.0 41.0 32.0 41.0 19 37.775801928494936 40.0 37.0 41.0 32.0 41.0 20 37.67312553898154 40.0 37.0 41.0 32.0 41.0 21 37.53664509654422 39.0 37.0 41.0 32.0 41.0 22 37.41966117747236 39.0 36.0 41.0 32.0 41.0 23 37.2439583021077 39.0 36.0 41.0 31.0 41.0 24 37.39324092718943 39.0 36.0 41.0 31.0 41.0 25 37.346202854728595 39.0 36.0 41.0 31.0 41.0 26 37.13206388926903 39.0 36.0 41.0 31.0 41.0 27 37.09054672549033 39.0 36.0 41.0 31.0 41.0 28 36.94385077732813 39.0 36.0 41.0 31.0 41.0 29 36.72378382957648 39.0 35.0 41.0 30.0 41.0 30 36.57751798053258 39.0 35.0 40.0 30.0 41.0 31 36.35328776020454 38.0 35.0 40.0 30.0 41.0 32 36.20125336965281 38.0 35.0 40.0 30.0 41.0 33 36.03328011399799 38.0 35.0 40.0 29.0 41.0 34 35.83711364391703 38.0 35.0 40.0 28.0 41.0 35 35.64483457475579 38.0 35.0 40.0 27.0 41.0 36 35.587886410388414 38.0 35.0 40.0 27.0 41.0 37 35.44714929001062 38.0 34.0 40.0 26.0 41.0 38 35.31339584976073 38.0 34.0 40.0 25.0 41.0 39 35.17755490823466 38.0 34.0 40.0 25.0 41.0 40 35.010720329134436 38.0 34.0 40.0 24.0 41.0 41 34.89314600127292 38.0 34.0 40.0 24.0 41.0 42 34.62175997428094 38.0 33.0 40.0 23.0 41.0 43 34.23875279944565 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 2.0 14 6.0 15 9.0 16 28.0 17 76.0 18 171.0 19 407.0 20 865.0 21 1773.0 22 3261.0 23 5685.0 24 9153.0 25 13814.0 26 20231.0 27 27817.0 28 38248.0 29 49331.0 30 62338.0 31 76743.0 32 93392.0 33 114302.0 34 140472.0 35 174677.0 36 226578.0 37 327215.0 38 438832.0 39 476367.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.27487460872927 21.338520589366127 14.267386974078924 23.119217827825675 2 18.463025595241973 23.88279581804635 35.28789488203771 22.36628370467396 3 19.28812079268571 24.763760456513285 33.02387918993655 22.924239560864457 4 13.481739251323424 16.62406947621313 36.6918861149668 33.202305157496646 5 12.435729506754512 39.0488292832333 34.88056060596187 13.634880604050318 6 31.849100376010895 38.386911084610055 13.960191937162083 15.803796602216966 7 25.589507319287776 33.80062081983843 21.66252859181639 18.94734326905741 8 27.235787722190725 34.681976457503815 19.22217226121353 18.860063559091927 9 24.89431074444075 14.490560627684046 21.645368071439897 38.969760556435304 10 16.201573120108435 28.245086986460567 33.23497531274505 22.31836458068594 11 33.456498080845606 22.989015094741276 23.18859846337315 20.36588836103997 12 21.183815239845423 27.666712283239818 30.923170829722018 20.226301647192734 13 31.443069430596555 21.294337679941087 25.960348336841466 21.302244552620888 14 20.44374064588723 22.78747673011715 28.436676593701872 28.332106030293748 15 22.851948153506285 30.062147150376116 25.218622857378698 21.867281838738897 16 21.667959136239325 28.522218529452015 26.445882452607638 23.36393988170102 17 21.599968720064126 27.323067432156208 27.384063307114666 23.692900540665 18 22.54410145125869 26.06926333578794 29.718849854135577 21.66778535881779 19 22.61083198112777 25.510047593291326 30.961141196327212 20.917979229253692 20 23.313240318968457 25.29465047929985 30.25577864232045 21.136330559411242 21 22.15227681005476 26.005660799506476 30.860393736192844 20.981668654245926 22 21.460121340084587 26.41786084338527 30.245873329293012 21.876144487237134 23 22.025940624599496 26.366248949189654 30.76485959870449 20.84295082750636 24 21.830918913282897 26.611839890172668 29.3479653922265 22.209275804317937 25 21.924584943489755 26.382584026813856 30.323421503652586 21.369409526043807 26 21.325704504527987 27.33023575079449 30.268203727960135 21.07585601671739 27 20.73260216483223 27.263331443503873 29.966352346755464 22.03771404490843 28 21.084718665215625 27.116011634398372 30.00879748196516 21.79047221842084 29 21.300202667917866 27.064660406335054 29.51679015724684 22.118346768500235 30 21.20314797799109 27.321764101494704 30.792099209529955 20.682988710984255 31 21.862416070935943 27.037855239063425 30.44636902938793 20.653359660612697 32 21.32970138522327 27.02977458896209 29.721499959813976 21.919024066000663 33 21.021941571686444 26.9132568278235 30.34748967653505 21.717311923955002 34 20.62003784003354 27.086382584026815 30.967223406080908 21.32635616985874 35 20.287949187481942 28.580520854376694 30.076961675561897 21.054568282579464 36 21.821665265586205 27.009181964510304 29.864735999513425 21.304416770390063 37 21.007387712632966 27.418601569644558 29.950625490106635 21.623385227615838 38 20.73829337538747 26.360079850725192 30.961792861657965 21.93983391222937 39 20.36236936825391 26.16605735958241 31.68457660217352 21.78699666999016 40 19.645494060070508 26.4003962125211 31.53925523341566 22.41485449399273 41 20.361152926303166 25.52468834105557 31.828855306402176 22.285303426239086 42 19.606958916845333 26.97998735769258 31.133311176712088 22.279742548749997 43 19.642366066482897 26.602325576343677 30.80921628555106 22.946092071622363 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 858.0 1 742.0 2 626.0 3 1379.0 4 2132.0 5 2132.0 6 3325.0 7 4518.0 8 4804.5 9 5091.0 10 7587.0 11 10083.0 12 10083.0 13 18119.0 14 26155.0 15 44443.0 16 62731.0 17 57612.0 18 52493.0 19 52493.0 20 53228.5 21 53964.0 22 44014.0 23 34064.0 24 38629.5 25 43195.0 26 43195.0 27 48355.5 28 53516.0 29 58114.0 30 62712.0 31 68470.5 32 74229.0 33 74229.0 34 82398.5 35 90568.0 36 98076.5 37 105585.0 38 112475.5 39 119366.0 40 119366.0 41 123588.5 42 127811.0 43 134042.5 44 140274.0 45 146997.5 46 153721.0 47 153721.0 48 187635.5 49 221550.0 50 207859.0 51 194168.0 52 177904.0 53 161640.0 54 161640.0 55 146624.5 56 131609.0 57 114966.5 58 98324.0 59 88169.0 60 78014.0 61 78014.0 62 68640.0 63 59266.0 64 51638.0 65 44010.0 66 37526.5 67 31043.0 68 31043.0 69 26317.5 70 21592.0 71 18009.5 72 14427.0 73 11901.5 74 9376.0 75 9376.0 76 7658.0 77 5940.0 78 4600.5 79 3261.0 80 2554.0 81 1847.0 82 1847.0 83 1433.0 84 1019.0 85 778.0 86 537.0 87 387.0 88 237.0 89 237.0 90 194.5 91 152.0 92 103.0 93 54.0 94 40.0 95 26.0 96 26.0 97 17.0 98 8.0 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2301795.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.65270899484471 #Duplication Level Percentage of deduplicated Percentage of total 1 80.1619544925644 41.405821078624136 2 11.08783589070425 11.454335212902828 3 3.6027421061560942 5.58274168778264 4 1.5522602435420143 3.207137865757698 5 0.8171044030219267 2.1102827973848943 6 0.5247663379577128 1.626336176689204 7 0.35306090930528117 1.2765586684060664 8 0.2667815593736135 1.1023992201212913 9 0.20097294385154202 0.9342717286140868 >10 1.2499149376880303 12.164460489483483 >50 0.11013610533015285 3.9375412683545377 >100 0.06420563964493106 6.1701193935397 >500 0.004638200992803533 1.6183117100774493 >1k 0.003204575231391491 3.261887761020633 >5k 1.6866185428376267E-4 0.6580489611364069 >10k+ 2.5299278142564403E-4 3.489745980104802 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 33275 1.445610925386492 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23778 1.0330198823092411 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 23062 1.0019137238546438 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9741 0.4231914657908285 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5366 0.2331224109879464 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4367 0.18972149995981397 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4270 0.18550739748761294 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4243 0.184334399892258 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4070 0.17681852641090975 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3700 0.16074411491900886 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3657 0.1588760076375177 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3002 0.13041995486131475 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2915 0.12664029594294887 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 4.344435538351591E-5 0.0 7 0.0 0.0 0.0 4.344435538351591E-5 0.0 8 0.0 0.0 0.0 8.688871076703182E-5 0.0 9 0.0 0.0 0.0 2.1722177691757953E-4 0.0 10 0.0 0.0 0.0 2.6066613230109543E-4 0.0 11 4.344435538351591E-5 0.0 0.0 4.77887909218675E-4 0.0 12 4.344435538351591E-5 0.0 0.0 6.516653307527386E-4 0.0 13 4.344435538351591E-5 0.0 0.0 6.516653307527386E-4 0.0 14 4.344435538351591E-5 0.0 0.0 7.819983969032864E-4 0.0 15 4.344435538351591E-5 0.0 0.0 9.5577581843735E-4 0.0 16 8.688871076703182E-5 0.0 0.0 0.0011729975953549295 0.0 17 8.688871076703182E-5 0.0 0.0 0.0017812185707241522 4.344435538351591E-5 18 8.688871076703182E-5 0.0 0.0 0.0021722177691757953 4.344435538351591E-5 19 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.0030845492322296294 4.344435538351591E-5 20 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.005039545224487845 4.344435538351591E-5 21 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.00838476058901857 4.344435538351591E-5 22 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.01433663727656025 4.344435538351591E-5 23 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.017681852641090973 4.344435538351591E-5 24 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.022026288179442566 4.344435538351591E-5 25 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.02515428176705571 4.344435538351591E-5 26 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.031019269743830357 4.344435538351591E-5 27 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.07307340575507376 4.344435538351591E-5 28 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.18020718613082398 4.344435538351591E-5 29 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.34160296638058557 4.344435538351591E-5 30 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.5530466440321575 4.344435538351591E-5 31 1.3033306615054771E-4 0.0 4.344435538351591E-5 0.8577219083367545 4.344435538351591E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGCTA 50 2.7227907E-7 29.599998 10 GGTATCA 8335 0.0 21.374325 1 TAATACT 575 0.0 18.017391 4 TTCGCTA 125 8.591087E-9 17.760002 26 CTAATAC 460 0.0 17.293478 3 ATTGGAC 850 0.0 16.32353 3 GTATTGG 795 0.0 15.591196 1 TTACCCG 155 7.219569E-9 15.516129 10 GTATTAG 455 0.0 15.450549 1 GGACCCT 940 0.0 15.154256 6 TCGGGTA 110 1.4530469E-5 15.136364 25 ATAGACG 125 2.9616822E-6 14.800001 3 TATACTG 300 0.0 14.799999 5 TTAACGG 240 0.0 14.645834 35 TATACAG 355 0.0 14.591549 5 TATACAC 1270 0.0 14.42126 37 ATGCGAC 155 1.2117016E-7 14.32258 21 TACCCGA 170 2.4399924E-8 14.147059 11 TGGACCC 995 0.0 14.130653 5 GAGTCGC 120 3.3031858E-5 13.875001 23 >>END_MODULE