##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088568_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1273464 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.89606145128563 31.0 31.0 31.0 28.0 34.0 2 31.045362098967853 31.0 31.0 34.0 28.0 34.0 3 31.022888750683176 31.0 31.0 34.0 27.0 34.0 4 34.832894373142864 35.0 35.0 37.0 32.0 37.0 5 34.67590053586124 35.0 35.0 37.0 32.0 37.0 6 34.89381325267146 35.0 35.0 37.0 32.0 37.0 7 34.7135741567881 35.0 35.0 37.0 32.0 37.0 8 34.86992722212799 35.0 35.0 37.0 32.0 37.0 9 36.29193758127438 38.0 35.0 39.0 32.0 39.0 10 36.045656571367545 38.0 35.0 39.0 31.0 39.0 11 36.207992530609424 38.0 35.0 39.0 32.0 39.0 12 35.92669835974947 37.0 35.0 39.0 30.0 39.0 13 36.08642882719889 37.0 35.0 39.0 31.0 39.0 14 36.746883304121674 38.0 36.0 40.0 31.0 41.0 15 36.83245698347185 38.0 36.0 40.0 31.0 41.0 16 36.617938944485275 38.0 36.0 40.0 31.0 41.0 17 36.7673432464522 38.0 36.0 40.0 31.0 41.0 18 36.75828370491824 38.0 36.0 40.0 31.0 41.0 19 36.860051795731955 39.0 36.0 40.0 31.0 41.0 20 36.75750237148439 39.0 36.0 40.0 30.0 41.0 21 36.60037896634691 38.0 35.0 40.0 30.0 41.0 22 36.44939315127872 38.0 35.0 40.0 30.0 41.0 23 36.254010321453926 38.0 35.0 40.0 30.0 41.0 24 36.3734758108592 38.0 35.0 40.0 30.0 41.0 25 36.274709768002865 38.0 35.0 40.0 30.0 41.0 26 35.96712667181797 38.0 35.0 40.0 29.0 41.0 27 35.8873552766313 38.0 34.0 40.0 29.0 41.0 28 35.68813723827293 38.0 34.0 40.0 27.0 41.0 29 35.44684576870646 38.0 34.0 40.0 27.0 41.0 30 35.24143988365592 38.0 34.0 40.0 27.0 41.0 31 34.870388954850704 37.0 33.0 40.0 25.0 41.0 32 34.69840215349629 37.0 33.0 40.0 25.0 41.0 33 34.450110093414494 37.0 33.0 40.0 25.0 41.0 34 34.18168632957037 36.0 33.0 40.0 24.0 41.0 35 33.90979721452668 36.0 33.0 39.0 23.0 40.0 36 33.81243521607207 36.0 33.0 39.0 23.0 41.0 37 33.590973125270914 36.0 32.0 39.0 21.0 41.0 38 33.401520576946034 36.0 32.0 39.0 21.0 41.0 39 33.15453833009806 36.0 31.0 39.0 19.0 40.0 40 32.88597793106048 36.0 31.0 39.0 18.0 40.0 41 32.668206561002116 36.0 31.0 39.0 15.0 40.0 42 32.284192564532646 35.0 30.0 39.0 15.0 40.0 43 31.83492505481113 35.0 30.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 1.0 14 11.0 15 26.0 16 62.0 17 118.0 18 292.0 19 595.0 20 1174.0 21 2284.0 22 3850.0 23 5988.0 24 9292.0 25 13452.0 26 18586.0 27 24520.0 28 32021.0 29 40382.0 30 49092.0 31 58068.0 32 69418.0 33 82897.0 34 100773.0 35 123178.0 36 162074.0 37 202857.0 38 191984.0 39 80467.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.71584591319425 24.27716841622535 16.579502836358152 19.42748283422225 2 22.652701607583726 26.007723814728962 31.48703065025788 19.852543927429437 3 23.27698309492848 24.30904996136522 33.4165708649793 18.997396078727 4 16.823954191088244 18.508179265373816 32.54650308135919 32.12136346217875 5 11.463378627114706 41.661405426458856 33.33356891125309 13.541647035173355 6 32.311474843419205 37.98034337837583 11.928880596546113 17.779301181658845 7 23.636396474497907 36.24240653838663 20.01894046474812 20.102256522367338 8 28.784873384720733 35.16283145813309 17.497864093527575 18.554431063618605 9 24.175084650999164 14.088109283026453 22.24373833889297 39.49306772708141 10 17.374578315523642 29.630205486766805 30.868717136880196 22.12649906082936 11 34.02671767713889 22.275619884032842 22.73845197037372 20.959210468454543 12 20.61024104332749 29.622666993334718 30.859765175929592 18.907326787408202 13 34.40466318639553 20.91044583906573 26.214718280218364 18.470172694320375 14 19.58343541709856 23.934324017011868 29.490664832299935 26.99157573358964 15 22.251041254405308 31.17913030914105 26.17828222862994 20.391546207823698 16 20.28043195567366 28.74969374870432 28.0679312489399 22.90194304668212 17 21.267110809571374 27.402737729531417 27.902162919407225 23.427988541489984 18 22.408093200907132 24.650088263193933 31.349296093175777 21.592522442723155 19 22.432436252614917 23.955683081736115 33.782501900328555 19.829378765320417 20 23.23308707588122 23.433328307671044 33.490149701915406 19.84343491453233 21 22.00886715289949 24.22447748817399 34.51208671780278 19.254568641123736 22 19.892121017947897 24.85339200794055 33.879717055213185 21.374769918898377 23 21.453845573962045 25.10514627818297 34.574357814590755 18.866650333264232 24 21.01700558476722 25.062506674707723 32.460674192595945 21.459813547929112 25 20.850294943555532 25.80237839467782 33.29509118436014 20.05223547740651 26 20.429081623037636 26.825885930030218 33.236118178448706 19.508914268483444 27 19.410285646080297 26.48414089444224 33.089196082496244 21.01637737698121 28 20.045403717733677 26.393050765471187 33.07466877744483 20.486876739350308 29 19.9655428029375 25.565151429486814 32.07267735876319 22.3966284088125 30 20.34796429266944 26.198227825835673 34.20371522084645 19.250092660648434 31 21.377282750042404 26.19838487778218 33.30278672973873 19.121545642436693 32 20.84409139166871 26.047929113033426 32.36974111557139 20.73823837972648 33 20.470700388860617 26.239375435819152 32.76739664411401 20.522527531206222 34 19.28974827714015 26.82769202741499 33.85560958142515 20.026950114019712 35 18.567230797258503 28.982052103553773 32.80524616322095 19.64547093596678 36 21.742507051632398 25.96359221776195 32.36762091429361 19.926279816312043 37 20.395472506486247 27.680248519000145 31.934079015975325 19.990199958538284 38 20.439839681373012 25.22615480296263 33.60738897997902 20.726616535685345 39 19.578959436623258 25.453094865657768 34.36045306345527 20.607492634263707 40 18.225721339590283 25.85067186822714 33.59765175929591 22.325955032886675 41 19.86071062864753 25.031410389300362 33.874220237085616 21.233658744966487 42 19.12814182418977 26.998800123128724 32.50590515318847 21.367152899493036 43 19.06084506511374 27.109757323332268 31.84746486747957 21.98193274407443 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 292.0 1 290.5 2 289.0 3 542.5 4 796.0 5 796.0 6 1620.0 7 2444.0 8 2826.5 9 3209.0 10 5127.0 11 7045.0 12 7045.0 13 14361.5 14 21678.0 15 39617.0 16 57556.0 17 50101.0 18 42646.0 19 42646.0 20 45690.0 21 48734.0 22 36151.0 23 23568.0 24 24712.0 25 25856.0 26 25856.0 27 26769.5 28 27683.0 29 28378.5 30 29074.0 31 30906.0 32 32738.0 33 32738.0 34 35882.5 35 39027.0 36 42928.0 37 46829.0 38 49468.5 39 52108.0 40 52108.0 41 55017.5 42 57927.0 43 61448.0 44 64969.0 45 72292.5 46 79616.0 47 79616.0 48 113797.5 49 147979.0 50 134212.5 51 120446.0 52 106414.5 53 92383.0 54 92383.0 55 79921.5 56 67460.0 57 58084.5 58 48709.0 59 43304.5 60 37900.0 61 37900.0 62 33308.5 63 28717.0 64 24995.0 65 21273.0 66 18119.0 67 14965.0 68 14965.0 69 12922.5 70 10880.0 71 9147.0 72 7414.0 73 6078.5 74 4743.0 75 4743.0 76 3802.0 77 2861.0 78 2251.0 79 1641.0 80 1317.0 81 993.0 82 993.0 83 734.5 84 476.0 85 362.5 86 249.0 87 201.5 88 154.0 89 154.0 90 120.5 91 87.0 92 56.5 93 26.0 94 20.0 95 14.0 96 14.0 97 10.0 98 6.0 99 5.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1273464.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.1396342217985 #Duplication Level Percentage of deduplicated Percentage of total 1 83.75000285884731 42.829445122760305 2 9.153181544196336 9.361807122718346 3 2.663651859788944 4.086545454114597 4 1.2387149379786668 2.533897153332273 5 0.7117478107618341 1.8199261350263025 6 0.4626194938017288 1.4194915018136394 7 0.3185834498792674 1.1404568767161087 8 0.22443922235701458 0.91821917890901 9 0.18304060317338855 0.8424566544622014 >10 1.1313253415472728 10.974224519917202 >50 0.09541078595878612 3.3882031204770775 >100 0.05539970707290246 5.458136581440436 >500 0.005092450558538494 1.8744362878647571 >1k 0.0057097172929067965 5.225330495469399 >5k 6.172667343683023E-4 2.0883013240770123 >10k+ 4.6295005077622665E-4 6.03912247090142 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 31905 2.5053711765703626 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 25873 2.0317025059208587 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 18747 1.472126420534856 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9288 0.7293492395544751 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6325 0.4966767808120214 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5693 0.44704836571744466 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5156 0.40487991808170465 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4492 0.3527386718430988 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4141 0.3251760552320286 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3497 0.2746053284584409 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3122 0.24515808848934875 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2927 0.2298455237054208 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2548 0.200084179843325 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2181 0.1712651476602401 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 2115 0.16608243342567988 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 2032 0.15956477764585414 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1889 0.14833556347097365 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1830 0.14370253104916983 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 1784 0.14009033627962786 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1755 0.1378130830553514 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 1718 0.13490762204506762 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1680 0.13192363506153296 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1670 0.13113837532902384 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1593 0.12509187538870356 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1556 0.12218641437841982 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1525 0.11975210920764152 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 1512 0.11873127155537966 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 1505 0.11818158974262326 No Hit TTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCC 1483 0.11645401833110319 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1467 0.11519760275908861 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1402 0.11009341449777928 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 1288 0.10114145354717527 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 1.5705194650182495E-4 6 7.852597325091248E-5 0.0 0.0 0.0 1.5705194650182495E-4 7 7.852597325091248E-5 0.0 0.0 0.0 1.5705194650182495E-4 8 7.852597325091248E-5 0.0 0.0 0.0 1.5705194650182495E-4 9 7.852597325091248E-5 0.0 0.0 7.852597325091248E-5 1.5705194650182495E-4 10 1.5705194650182495E-4 0.0 0.0 1.5705194650182495E-4 1.5705194650182495E-4 11 1.5705194650182495E-4 0.0 0.0 2.355779197527374E-4 1.5705194650182495E-4 12 1.5705194650182495E-4 0.0 0.0 3.141038930036499E-4 1.5705194650182495E-4 13 1.5705194650182495E-4 0.0 0.0 3.141038930036499E-4 1.5705194650182495E-4 14 1.5705194650182495E-4 0.0 0.0 3.141038930036499E-4 1.5705194650182495E-4 15 1.5705194650182495E-4 0.0 0.0 3.9262986625456236E-4 1.5705194650182495E-4 16 1.5705194650182495E-4 0.0 0.0 5.496818127563873E-4 1.5705194650182495E-4 17 1.5705194650182495E-4 0.0 0.0 0.0012564155720145996 1.5705194650182495E-4 18 1.5705194650182495E-4 0.0 0.0 0.001491993491767337 1.5705194650182495E-4 19 1.5705194650182495E-4 0.0 0.0 0.0021202012777746366 1.5705194650182495E-4 20 2.355779197527374E-4 0.0 0.0 0.005104188261309311 1.5705194650182495E-4 21 3.141038930036499E-4 0.0 0.0 0.009109012897105846 1.5705194650182495E-4 22 3.141038930036499E-4 0.0 0.0 0.016647506329193443 1.5705194650182495E-4 23 3.141038930036499E-4 0.0 7.852597325091248E-5 0.02065233096498998 1.5705194650182495E-4 24 3.141038930036499E-4 0.0 7.852597325091248E-5 0.025206837413542904 2.355779197527374E-4 25 3.141038930036499E-4 0.0 7.852597325091248E-5 0.02881903218308488 2.355779197527374E-4 26 3.141038930036499E-4 0.0 7.852597325091248E-5 0.034551428230401485 2.355779197527374E-4 27 3.141038930036499E-4 0.0 7.852597325091248E-5 0.07428557069536319 2.355779197527374E-4 28 3.141038930036499E-4 0.0 7.852597325091248E-5 0.17927479693183318 2.355779197527374E-4 29 3.141038930036499E-4 0.0 7.852597325091248E-5 0.3406456719624583 2.355779197527374E-4 30 3.141038930036499E-4 0.0 7.852597325091248E-5 0.5715905592933919 2.355779197527374E-4 31 3.141038930036499E-4 0.0 7.852597325091248E-5 0.8545196409164295 2.355779197527374E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6730 0.0 28.231054 1 CGCGATA 50 2.702325E-4 22.199999 14 GTATCAA 10215 0.0 18.581497 2 TTGGACC 680 0.0 17.683825 4 GTATTAG 95 3.607005E-6 17.526316 1 ATTGGAC 465 0.0 17.505377 3 CGATTTA 75 2.0674868E-4 17.266666 30 TGGACCC 665 0.0 16.413534 5 GATACCT 600 0.0 16.341667 36 CGAATCA 80 3.3829254E-4 16.1875 29 GATACTG 605 0.0 15.900826 36 ACGTGCG 70 0.0025926998 15.857142 9 GACTTTT 460 0.0 15.684781 4 GTATTGG 415 0.0 15.602409 1 AGGTCCG 95 7.06063E-5 15.578948 5 TGATACT 640 0.0 15.3203125 35 TAAGCCG 85 5.3647166E-4 15.235294 10 ACACTTA 110 1.4520336E-5 15.136364 6 TTGCGAT 135 3.9728184E-7 15.074073 11 ACTCTGT 690 0.0 15.014493 37 >>END_MODULE