##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088565_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 664799 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.9127465594864 31.0 31.0 33.0 28.0 34.0 2 31.060288899351534 31.0 31.0 34.0 28.0 34.0 3 31.051875830138133 31.0 31.0 34.0 28.0 34.0 4 34.84131895505258 35.0 35.0 37.0 32.0 37.0 5 34.68820951896739 35.0 35.0 37.0 32.0 37.0 6 34.90098510978506 35.0 35.0 37.0 32.0 37.0 7 34.746673806669385 35.0 35.0 37.0 32.0 37.0 8 34.8778623313212 35.0 35.0 37.0 32.0 37.0 9 36.33208834549992 38.0 35.0 39.0 32.0 39.0 10 36.064318688806694 38.0 35.0 39.0 31.0 39.0 11 36.230937471325916 38.0 35.0 39.0 32.0 39.0 12 35.97663955571534 37.0 35.0 39.0 30.0 39.0 13 36.122590437109565 38.0 35.0 39.0 32.0 39.0 14 36.83500727287496 38.0 36.0 40.0 31.0 41.0 15 36.90035484409574 38.0 36.0 40.0 31.0 41.0 16 36.689292553087476 38.0 36.0 40.0 31.0 41.0 17 36.8199275269668 38.0 36.0 40.0 31.0 41.0 18 36.80321119616606 38.0 36.0 40.0 31.0 41.0 19 36.88493364159693 39.0 36.0 40.0 31.0 41.0 20 36.78271026280124 39.0 36.0 40.0 31.0 41.0 21 36.62231892647251 38.0 35.0 40.0 30.0 41.0 22 36.47732622943175 38.0 35.0 40.0 30.0 41.0 23 36.287067218813505 38.0 35.0 40.0 30.0 41.0 24 36.41739533302547 38.0 35.0 40.0 30.0 41.0 25 36.339586852567464 38.0 35.0 40.0 30.0 41.0 26 36.045443810836055 38.0 35.0 40.0 29.0 41.0 27 35.97006463607797 38.0 34.0 40.0 29.0 41.0 28 35.769062528674084 38.0 34.0 40.0 28.0 41.0 29 35.528012226251846 38.0 34.0 40.0 27.0 41.0 30 35.36855350263764 38.0 34.0 40.0 27.0 41.0 31 35.03068897516392 37.0 34.0 40.0 26.0 41.0 32 34.85681988089633 37.0 33.0 40.0 26.0 41.0 33 34.62578463565679 37.0 33.0 40.0 25.0 41.0 34 34.37131373542981 37.0 33.0 40.0 24.0 41.0 35 34.11575980108273 37.0 33.0 40.0 24.0 41.0 36 34.02879667388188 37.0 33.0 40.0 23.0 41.0 37 33.835438982308936 37.0 33.0 40.0 22.0 41.0 38 33.65231596317082 37.0 33.0 40.0 21.0 41.0 39 33.46281357222258 36.0 32.0 40.0 21.0 41.0 40 33.22643987129945 36.0 31.0 40.0 19.0 41.0 41 33.026459125239356 36.0 31.0 40.0 18.0 41.0 42 32.6718511911119 36.0 31.0 39.0 15.0 41.0 43 32.23555540847685 36.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 1.0 14 4.0 15 13.0 16 25.0 17 54.0 18 128.0 19 285.0 20 586.0 21 1074.0 22 1880.0 23 2992.0 24 4569.0 25 6536.0 26 9348.0 27 12311.0 28 15990.0 29 20418.0 30 24928.0 31 29452.0 32 35383.0 33 42818.0 34 51599.0 35 63810.0 36 83544.0 37 105919.0 38 104394.0 39 46736.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.625661290104226 24.624886619865556 16.123068777179267 19.62638331285095 2 22.478523583820074 26.037343618146235 31.56578153697584 19.918351261057854 3 23.303133729142193 24.793208172695806 32.757269490477576 19.14638860768443 4 16.966180755386215 18.878488084368357 32.96891240811132 31.186418752134102 5 11.850950437651079 41.32602485864149 33.5245690802784 13.298455623429037 6 31.81187095648459 38.35444999165161 12.484976662118926 17.34870238974487 7 24.137521265826212 35.28389783979819 20.775753272793732 19.802827621581862 8 28.318333812174806 35.33293521801326 18.016874273276585 18.331856696535343 9 24.503195702761285 14.114642170039366 21.759509265206475 39.622652861992876 10 17.100807913369305 29.42784209964215 31.614818915190906 21.85653107179764 11 33.97432908292582 22.529215597496385 22.588932895506762 20.907522424071033 12 20.343592574597736 29.48214422705209 30.87309096433659 19.30117223401359 13 33.544575127218906 20.802377861579213 26.325099766997244 19.327947244204637 14 19.59434355346503 23.7170934372645 29.293816627281327 27.394746381989144 15 22.727471010034613 30.700407190744873 25.90647699530234 20.665644803918177 16 20.376986126633764 28.700103339505624 27.86902507374409 23.053885460116515 17 21.22145189749082 27.437766903981505 28.013128780277945 23.327652418249727 18 22.214233174237627 25.187161833877607 30.912802215406458 21.685802776478305 19 22.462428493424326 24.473111421647747 33.04051299716155 20.023947087766377 20 23.121725514027546 24.22401357402764 32.68837648672756 19.965884425217244 21 21.87112194813771 24.87533826013577 33.64039356256553 19.613146229160993 22 20.211522580509296 25.41053762114564 33.086842790076396 21.291097008268665 23 21.157673221530114 25.621428431751553 33.825111048602665 19.39578729811567 24 21.123076298249547 25.530423481383096 31.7745664479038 21.571933772463556 25 21.100362666008824 26.05840261492571 32.525770947308885 20.315463771756576 26 20.59088536535103 26.97161096812721 32.46785870616532 19.96964496035644 27 19.910980612185035 26.67482953494214 32.29607746100701 21.11811239186581 28 20.279061791609195 26.86375882033517 32.44890560906379 20.408273778991845 29 20.191817376379927 26.0170367283946 31.7936699664109 21.997475928814573 30 20.58050628836686 26.6102987519536 33.31427995529476 19.494915004384783 31 21.3151644331595 26.50169449713372 32.56503093416205 19.61811013554473 32 20.987095347616346 26.394143192152814 31.87670258228427 20.74205887794657 33 20.56486246218782 26.431297279328035 32.369483106924044 20.634357151560096 34 19.662033185970497 26.980786673866834 33.107450522639176 20.249729617523492 35 19.196930199955176 28.797425988907925 32.09150434943494 19.914139461701957 36 21.61811314397284 26.27907081689353 31.855944428315926 20.246871610817706 37 20.540343773080284 27.59601022263872 31.537351891323546 20.32629411295745 38 20.56486246218782 25.583973501765193 32.87565113665935 20.975512899387635 39 19.63044469080128 25.76372708141859 33.72101943594981 20.884808791830313 40 18.792447040383635 26.173625411590574 32.861060260319285 22.17286728770651 41 20.2799643200426 25.32118730623843 33.08187888369267 21.31696949002631 42 19.491455312056726 27.174078180021326 31.80134145809485 21.53312504982709 43 19.726864811770174 26.89835574361574 31.269902632224177 22.10487681238991 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 279.0 1 226.5 2 174.0 3 295.5 4 417.0 5 417.0 6 838.5 7 1260.0 8 1440.0 9 1620.0 10 2575.0 11 3530.0 12 3530.0 13 7031.0 14 10532.0 15 18821.5 16 27111.0 17 23394.5 18 19678.0 19 19678.0 20 21691.5 21 23705.0 22 17932.0 23 12159.0 24 12784.5 25 13410.0 26 13410.0 27 14370.0 28 15330.0 29 16145.0 30 16960.0 31 17907.5 32 18855.0 33 18855.0 34 20817.5 35 22780.0 36 24878.0 37 26976.0 38 28173.5 39 29371.0 40 29371.0 41 30705.5 42 32040.0 43 33737.0 44 35434.0 45 38427.5 46 41421.0 47 41421.0 48 56509.5 49 71598.0 50 65120.5 51 58643.0 52 52830.5 53 47018.0 54 47018.0 55 41335.5 56 35653.0 57 31074.5 58 26496.0 59 23389.5 60 20283.0 61 20283.0 62 17961.0 63 15639.0 64 13529.0 65 11419.0 66 9979.5 67 8540.0 68 8540.0 69 7185.5 70 5831.0 71 5044.5 72 4258.0 73 3491.5 74 2725.0 75 2725.0 76 2183.0 77 1641.0 78 1299.5 79 958.0 80 733.5 81 509.0 82 509.0 83 382.5 84 256.0 85 191.0 86 126.0 87 106.0 88 86.0 89 86.0 90 68.0 91 50.0 92 34.0 93 18.0 94 11.5 95 5.0 96 5.0 97 4.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 664799.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.267246143808926 #Duplication Level Percentage of deduplicated Percentage of total 1 86.50161295482573 50.40210773875322 2 7.469757701808419 8.704844212917672 3 2.1981024621477774 3.8423213163383103 4 1.0501955623426114 2.4476801332061107 5 0.6091616643997906 1.7747086320477463 6 0.41051276096990125 1.43516688531647 7 0.2952573007676892 1.2042680873711302 8 0.2077043215416366 0.96818870627195 9 0.16506943706265098 0.8656327368134514 >10 0.9790808314617098 10.487628539148721 >50 0.06688268873449184 2.7199430883541513 >100 0.0370706160727136 4.222880825376816 >500 0.0057031717034860905 2.1455019939051354 >1k 0.003110820929174231 3.4646141392707746 >5k 2.5923507743118594E-4 1.2585414399618127 >10k+ 5.184701548623719E-4 4.055971524946543 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14737 2.216760253851164 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12115 1.8223553284526601 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8332 1.253311151190059 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4343 0.653280164380512 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2740 0.4121546512554922 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2487 0.37409803564686467 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2443 0.367479493801886 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1842 0.27707622905569956 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1779 0.26759968050493455 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1637 0.24623984091432147 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1459 0.21946483072327125 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1065 0.16019879692959826 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1063 0.15989795411846286 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1062 0.15974753271289518 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 1017 0.15297856946234878 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 936 0.14079443561136523 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 869 0.1307162014383295 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 864 0.12996409441049098 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 783 0.11777996055950746 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 747 0.11236478995907033 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 741 0.11146226152566414 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 687 0.10333950562500846 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.5042140556769792E-4 0.0 0.0 0.0 0.0 7 1.5042140556769792E-4 0.0 0.0 0.0 0.0 8 1.5042140556769792E-4 0.0 0.0 0.0 0.0 9 1.5042140556769792E-4 0.0 0.0 0.0 0.0 10 3.0084281113539583E-4 0.0 0.0 0.0 0.0 11 3.0084281113539583E-4 0.0 0.0 1.5042140556769792E-4 0.0 12 3.0084281113539583E-4 0.0 0.0 3.0084281113539583E-4 0.0 13 3.0084281113539583E-4 0.0 0.0 3.0084281113539583E-4 0.0 14 4.512642167030937E-4 0.0 0.0 6.016856222707917E-4 0.0 15 4.512642167030937E-4 0.0 0.0 0.0010529498389738854 0.0 16 4.512642167030937E-4 0.0 0.0 0.001805056866812375 0.0 17 4.512642167030937E-4 0.0 0.0 0.0022563210835154688 0.0 18 4.512642167030937E-4 0.0 0.0 0.0027075853002185624 0.0 19 4.512642167030937E-4 0.0 0.0 0.00361011373362475 0.0 20 4.512642167030937E-4 0.0 0.0 0.0060168562227079165 0.0 21 4.512642167030937E-4 0.0 0.0 0.01083034120087425 0.0 22 4.512642167030937E-4 0.0 0.0 0.016245511801311372 0.0 23 4.512642167030937E-4 0.0 0.0 0.021359839590613102 0.0 24 4.512642167030937E-4 0.0 0.0 0.02797838143559181 0.0 25 4.512642167030937E-4 0.0 0.0 0.03173891657478426 0.0 26 4.512642167030937E-4 0.0 0.0 0.03670282295851829 0.0 27 4.512642167030937E-4 0.0 0.0 0.07114932483352111 0.0 28 4.512642167030937E-4 0.0 0.0 0.16832155283025396 0.0 29 4.512642167030937E-4 0.0 0.0 0.3167874801255718 0.0 30 4.512642167030937E-4 0.0 0.0 0.5162462639083392 0.0 31 4.512642167030937E-4 0.0 0.0 0.7874560581468986 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGTTA 60 4.3170076E-8 27.750002 30 GGTATCA 3650 0.0 25.646576 1 ATTATAC 55 1.901094E-5 23.545454 3 CGACGGG 40 0.0019303358 23.125 20 TGATACT 275 0.0 20.854546 35 GATACTG 295 0.0 19.440678 36 CTGCTTA 80 1.6150007E-5 18.5 9 CTTCGTT 90 2.149438E-6 18.5 29 GTACCAT 50 0.0070318365 18.5 6 TACCCCA 50 0.0070318365 18.5 5 ACGTTCG 90 2.149438E-6 18.5 22 TACATGG 50 0.0070318365 18.5 2 CCCATAG 50 0.0070318365 18.5 1 AGCACTA 50 0.0070318365 18.5 5 AGGTCGC 50 0.0070318365 18.5 35 GTATCAA 5295 0.0 17.678942 2 CTGAGCA 85 2.7203196E-5 17.411764 9 ACACTTA 85 2.7203196E-5 17.411764 6 TAGGAGT 85 2.7203196E-5 17.411764 4 ATACTGT 310 0.0 17.306452 37 >>END_MODULE