##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088564_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 780248 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.815717566722377 31.0 31.0 34.0 30.0 34.0 2 31.98122520019276 31.0 31.0 34.0 30.0 34.0 3 32.118954486265906 33.0 31.0 34.0 30.0 34.0 4 35.770211522490285 37.0 35.0 37.0 35.0 37.0 5 35.67879827952138 37.0 35.0 37.0 33.0 37.0 6 35.72405824814674 37.0 35.0 37.0 33.0 37.0 7 35.58269550194297 37.0 35.0 37.0 33.0 37.0 8 35.60874619351796 37.0 35.0 37.0 33.0 37.0 9 37.24577826537204 39.0 37.0 39.0 34.0 39.0 10 37.10252893951667 39.0 37.0 39.0 33.0 39.0 11 37.16570500661328 39.0 37.0 39.0 33.0 39.0 12 37.016806194953396 39.0 37.0 39.0 33.0 39.0 13 37.06119720909249 39.0 37.0 39.0 33.0 39.0 14 38.1397914509233 40.0 37.0 41.0 33.0 41.0 15 38.13832012385806 40.0 37.0 41.0 33.0 41.0 16 38.045152310547415 40.0 37.0 41.0 33.0 41.0 17 38.0451279593155 40.0 37.0 41.0 33.0 41.0 18 37.99898493812224 40.0 37.0 41.0 33.0 41.0 19 38.051639991387354 40.0 37.0 41.0 33.0 41.0 20 37.94725651331372 40.0 37.0 41.0 33.0 41.0 21 37.801718171658244 40.0 37.0 41.0 32.0 41.0 22 37.68696491371974 40.0 37.0 41.0 32.0 41.0 23 37.5145338405225 39.0 36.0 41.0 32.0 41.0 24 37.682645774164115 40.0 37.0 41.0 32.0 41.0 25 37.62932682941834 40.0 37.0 41.0 32.0 41.0 26 37.44010237770555 39.0 36.0 41.0 32.0 41.0 27 37.40177353866976 39.0 36.0 41.0 32.0 41.0 28 37.26129128174632 39.0 36.0 41.0 31.0 41.0 29 37.05098122648184 39.0 36.0 41.0 31.0 41.0 30 36.93731864740442 39.0 36.0 41.0 31.0 41.0 31 36.699531431032185 39.0 35.0 41.0 30.0 41.0 32 36.553299720089 39.0 35.0 40.0 30.0 41.0 33 36.38637715187991 39.0 35.0 40.0 30.0 41.0 34 36.19757820590377 38.0 35.0 40.0 30.0 41.0 35 36.00728870820559 38.0 35.0 40.0 29.0 41.0 36 35.955775599552965 38.0 35.0 40.0 29.0 41.0 37 35.83002711958249 38.0 35.0 40.0 27.0 41.0 38 35.690281807835454 38.0 35.0 40.0 27.0 41.0 39 35.582341768258296 38.0 35.0 40.0 26.0 41.0 40 35.421057151059664 38.0 35.0 40.0 25.0 41.0 41 35.30907352534066 38.0 34.0 40.0 25.0 41.0 42 35.05518501809681 38.0 34.0 40.0 24.0 41.0 43 34.67123658118957 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 1.0 15 6.0 16 8.0 17 19.0 18 49.0 19 101.0 20 229.0 21 457.0 22 858.0 23 1538.0 24 2547.0 25 3885.0 26 5574.0 27 7972.0 28 10992.0 29 14735.0 30 18460.0 31 23060.0 32 28294.0 33 35520.0 34 44893.0 35 56021.0 36 74945.0 37 109247.0 38 150857.0 39 189979.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.5439706349776 20.854651341624713 13.961586572474394 23.639791450923294 2 18.415939547425946 23.072535911658857 35.61649629348617 22.89502824742902 3 19.167110969845485 24.26792506997775 32.63821246578011 23.926751494396655 4 13.47674072858886 16.140509171442925 36.53735735304672 33.84539274692149 5 12.57843659964524 38.55927858834627 34.98887533194574 13.873409480062747 6 32.31985214957296 37.9041022854272 14.098081635582533 15.677963929417313 7 26.147840173893428 33.32427638391896 21.543406711712173 18.98447673047544 8 27.100870492458807 34.502747844275156 19.301427238519032 19.094954424747005 9 24.957193097579232 14.479242497257284 21.44331033209954 39.12025407306395 10 16.214331853461978 27.948037034378814 33.27403594754488 22.563595164614327 11 33.74709066860793 22.627549189488473 23.16212281223406 20.46323732966954 12 21.259394448944438 27.336436620151545 30.873260809383684 20.530908121520337 13 31.308378874409158 21.13968891942049 25.859342157878007 21.692590048292338 14 20.620623186474045 22.48695286626816 28.032497359813803 28.85992658744399 15 22.85504096133537 29.82602967261691 25.050624929509592 22.268304436538124 16 22.040940829069733 28.46492397289067 26.09529277870626 23.39884241933334 17 21.774102593021706 27.187509612328387 27.120607806748627 23.917779987901284 18 22.79506003219489 26.06222636905189 29.338876869918284 21.803836728834934 19 22.93270857470958 25.2832432764967 30.391875403717794 21.392172745075925 20 23.436907239749413 25.216725964052454 29.881140355374185 21.465226440823944 21 22.589356204693892 25.82332796751802 30.227312341716996 21.360003486071093 22 21.601080682039555 26.357388932749586 29.876782766505013 22.164747618705846 23 22.2845813126083 26.23230049932842 30.311131845259453 21.171986342803827 24 22.20524756231352 26.27151879915104 28.876716121028185 22.646517517507252 25 22.138089427976745 26.328423783207388 29.83205339840666 21.701433390409203 26 21.70912325311952 27.232110816048234 29.69773712973311 21.36102880109914 27 21.09649752386421 27.19237985871159 29.424362510381314 22.286760107042888 28 21.476248577375397 26.803272805569513 29.579697737129734 22.140780879925355 29 21.556992135833735 26.930411869046765 29.003727020126934 22.508868974992566 30 21.5731408475254 27.090232849042867 30.242435738380617 21.094190565051115 31 22.076698690672707 26.74790579405522 30.091842593636898 21.083552921635174 32 21.545841834903772 26.674595769550198 29.446406783484225 22.333155612061805 33 21.41767745639848 26.48568147563339 30.08581886784715 22.010822200120987 34 20.85939342362941 26.670238180681018 30.580789697634597 21.889578698054976 35 20.412740564538453 28.12490387671612 29.816673672986028 21.645681885759398 36 22.17782038531339 26.55565922629728 29.554064861428675 21.712455526960657 37 21.29669028308948 26.871712583691338 29.695302006541507 22.13629512667767 38 21.072787113840725 25.850370651382637 30.80469286688335 22.272149367893284 39 20.603961817268356 25.69054967138653 31.486527360531525 22.218961150813588 40 19.826773026012244 25.979304016158967 31.443592293732248 22.750330664096545 41 20.59652828331505 25.163537746972757 31.56560478206929 22.674329187642904 42 19.731034235268787 26.570782622960902 31.07306907547344 22.62511406629687 43 19.68592037403492 26.376998082660897 30.73151100675683 23.205570536547356 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 258.0 1 238.0 2 218.0 3 520.5 4 823.0 5 823.0 6 1164.0 7 1505.0 8 1600.0 9 1695.0 10 2494.0 11 3293.0 12 3293.0 13 5993.5 14 8694.0 15 14290.5 16 19887.0 17 18296.5 18 16706.0 19 16706.0 20 16777.0 21 16848.0 22 13852.5 23 10857.0 24 12557.5 25 14258.0 26 14258.0 27 15858.5 28 17459.0 29 18995.5 30 20532.0 31 22397.5 32 24263.0 33 24263.0 34 27280.5 35 30298.0 36 32811.0 37 35324.0 38 37300.5 39 39277.0 40 39277.0 41 41025.0 42 42773.0 43 44882.5 44 46992.0 45 49157.5 46 51323.0 47 51323.0 48 62391.5 49 73460.0 50 68924.5 51 64389.0 52 59587.5 53 54786.0 54 54786.0 55 50234.5 56 45683.0 57 40726.0 58 35769.0 59 32472.5 60 29176.0 61 29176.0 62 25746.5 63 22317.0 64 19643.0 65 16969.0 66 14521.5 67 12074.0 68 12074.0 69 10180.5 70 8287.0 71 6986.0 72 5685.0 73 4633.0 74 3581.0 75 3581.0 76 2841.0 77 2101.0 78 1678.5 79 1256.0 80 976.0 81 696.0 82 696.0 83 529.0 84 362.0 85 276.0 86 190.0 87 141.0 88 92.0 89 92.0 90 73.0 91 54.0 92 37.0 93 20.0 94 17.0 95 14.0 96 14.0 97 7.5 98 1.0 99 2.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 780248.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.889870102292264 #Duplication Level Percentage of deduplicated Percentage of total 1 85.84559703651003 53.988184464798415 2 8.237662082100377 10.361309965797423 3 2.3052941333755603 4.349389457866963 4 1.0426155725795554 2.6227983170462132 5 0.6004325100906495 1.888056128239712 6 0.38775176539891615 1.4631394894723406 7 0.256735926485464 1.1302262347083742 8 0.19188398307077897 0.9654047016025392 9 0.1579433067165513 0.8939730638637374 >10 0.8764752056568484 9.919842926771718 >50 0.06105681710572316 2.623419367884357 >100 0.031650879562835896 3.8595534946082974 >500 0.002654589896150969 1.0839985037010371 >1k 0.0016335937822467503 1.6437840122465672 >5k 4.0839844556168756E-4 1.8659516951517672 >10k+ 2.0419922278084378E-4 1.3409681762405197 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10442 1.3382924403522982 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7425 0.9516205104018208 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7105 0.9106079092801262 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3228 0.41371461381509467 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1633 0.20929243009914794 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1460 0.1871199926177318 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1400 0.17943012990741405 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1371 0.17571336293076048 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1300 0.16661369205688448 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1255 0.16084629502414616 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1153 0.14777352841660601 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 934 0.11970552952394622 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 859 0.11009320113604905 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 1.2816437850529577E-4 0.0 0.0 3.8449313551588727E-4 0.0 10 1.2816437850529577E-4 0.0 0.0 5.126575140211831E-4 0.0 11 1.2816437850529577E-4 0.0 0.0 0.0010253150280423661 0.0 12 1.2816437850529577E-4 0.0 0.0 0.0014098081635582533 0.0 13 1.2816437850529577E-4 0.0 0.0 0.001537972542063549 0.0 14 1.2816437850529577E-4 0.0 0.0 0.001537972542063549 0.0 15 1.2816437850529577E-4 0.0 0.0 0.0017943012990741406 0.0 16 1.2816437850529577E-4 0.0 0.0 0.002563287570105915 0.0 17 1.2816437850529577E-4 0.0 0.0 0.0033322738411376896 0.0 18 1.2816437850529577E-4 0.0 0.0 0.0041012601121694645 0.0 19 3.8449313551588727E-4 0.0 0.0 0.004870246383201239 0.0 20 3.8449313551588727E-4 0.0 0.0 0.007818027088823041 0.0 21 3.8449313551588727E-4 0.0 0.0 0.01179112282248721 0.0 22 3.8449313551588727E-4 0.0 0.0 0.019737314289815545 0.0 23 3.8449313551588727E-4 0.0 0.0 0.024351231916006192 0.0 24 3.8449313551588727E-4 0.0 0.0 0.032041094626323936 0.0 25 3.8449313551588727E-4 0.0 0.0 0.03575786160297752 0.0 26 3.8449313551588727E-4 0.0 0.0 0.04242240928525289 0.0 27 3.8449313551588727E-4 0.0 0.0 0.09509796885092944 0.0 28 3.8449313551588727E-4 0.0 0.0 0.2196737447580769 0.0 29 3.8449313551588727E-4 0.0 0.0 0.3984630527729645 0.0 30 3.8449313551588727E-4 0.0 0.0 0.6327475366806451 0.0 31 3.8449313551588727E-4 0.0 0.0 1.0033989193179604 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAC 35 8.86683E-4 26.428572 3 GGTATCA 2360 0.0 22.184322 1 ACTAGAC 45 0.003824724 20.555555 3 GTAATAC 55 5.1410584E-4 20.181818 3 TATACCG 55 5.1410584E-4 20.181818 5 ACGGGTG 65 6.8985E-5 19.923077 5 ATGCGAC 50 0.0070329043 18.5 21 TTGGACC 345 0.0 17.695652 4 TTCGTTA 85 2.7213011E-5 17.411764 30 CCGGTCT 85 2.7213011E-5 17.411764 9 CTTATTG 65 0.0015793194 17.076923 3 GGGTAAG 110 7.799699E-7 16.818182 1 CTAACCT 100 5.87292E-6 16.650002 4 TGGACCC 395 0.0 16.392405 5 GTATTGG 260 0.0 16.365385 1 GGACCCT 375 0.0 16.279999 6 AGTACAC 80 3.3808238E-4 16.1875 3 ACGTTCG 95 7.055029E-5 15.578948 22 TACTCCG 95 7.055029E-5 15.578948 5 TAGATGT 155 7.194103E-9 15.516129 4 >>END_MODULE